RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ZNF521Q96K83 1311 aa14.31□□□□□ -0.12
RFFL-204ENST00000414419 E9PSI1 815 aa14.3□□□□□ -0.12
RFFL-204ENST00000414419 PDE8AO60658 829 aa14.3□□□□□ -0.12
RFFL-204ENST00000414419 SUPT20HQ8NEM7 779 aa14.3□□□□□ -0.12
RFFL-204ENST00000414419 MYH3P11055 1940 aa14.3□□□□□ -0.12
RFFL-204ENST00000414419 CWF19L2Q2TBE0 894 aaKnown RBP14.29□□□□□ -0.12
RFFL-204ENST00000414419 CCDC152Q4G0S7 254 aa14.29□□□□□ -0.12
RFFL-204ENST00000414419 DPP8Q6V1X1 898 aaPredicted RBP14.29□□□□□ -0.12
RFFL-204ENST00000414419 LARGE2Q8N3Y3 721 aa14.29□□□□□ -0.12
RFFL-204ENST00000414419 MPNDQ8N594 471 aa14.29□□□□□ -0.12
RFFL-204ENST00000414419 RBM46Q8TBY0 533 aaKnown RBP14.29□□□□□ -0.12
RFFL-204ENST00000414419 DNAAF4Q8WXU2 420 aa14.29□□□□□ -0.12
RFFL-204ENST00000414419 JARID2Q92833 1246 aaPredicted RBP14.29□□□□□ -0.12
RFFL-204ENST00000414419 NEURL1BA8MQ27 555 aa14.28□□□□□ -0.12
RFFL-204ENST00000414419 PPIP5K2O43314 1243 aa14.28□□□□□ -0.12
RFFL-204ENST00000414419 DDNO94850 711 aaPredicted RBP14.28□□□□□ -0.12
RFFL-204ENST00000414419 IGKV5-2P06315 115 aa14.28□□□□□ -0.12
RFFL-204ENST00000414419 EIF6P56537 245 aaKnown RBP14.28□□□□□ -0.12
RFFL-204ENST00000414419 WDR90Q96KV7 1748 aa14.28□□□□□ -0.12
RFFL-204ENST00000414419 SNED1Q8TER0 1413 aa14.27□□□□□ -0.12
RFFL-204ENST00000414419 CDHR2Q9BYE9 1310 aa14.27□□□□□ -0.12
RFFL-204ENST00000414419 RPS8P62241 208 aaKnown RBP14.27□□□□□ -0.13
RFFL-204ENST00000414419 NIM1KQ8IY84 436 aa14.27□□□□□ -0.13
RFFL-204ENST00000414419 CELF1Q92879 486 aaKnown RBP14.27□□□□□ -0.13
RFFL-204ENST00000414419 VPS33BQ9H267 617 aa14.27□□□□□ -0.13
RFFL-204ENST00000414419 IQCA1LA6NCM1 817 aa14.26□□□□□ -0.13
RFFL-204ENST00000414419 FZD9O00144 591 aa14.26□□□□□ -0.13
RFFL-204ENST00000414419 HSPA6P17066 643 aa14.26□□□□□ -0.13
RFFL-204ENST00000414419 SLFN5Q08AF3 891 aa14.26□□□□□ -0.13
RFFL-204ENST00000414419 UBE3BQ7Z3V4 1068 aa14.26□□□□□ -0.13
RFFL-204ENST00000414419 LINS1Q8NG48 757 aa14.26□□□□□ -0.13
RFFL-204ENST00000414419 CCDC85AQ96PX6 553 aaPredicted RBP14.26□□□□□ -0.13
RFFL-204ENST00000414419 NSFL1CQ9UNZ2 370 aaKnown RBP14.26□□□□□ -0.13
RFFL-204ENST00000414419 SCN4AP35499 1836 aa14.26□□□□□ -0.13
RFFL-204ENST00000414419 H7C1W4 665 aa14.25□□□□□ -0.13
RFFL-204ENST00000414419 FSTL1Q12841 308 aa14.25□□□□□ -0.13
RFFL-204ENST00000414419 GCKRQ14397 625 aa14.25□□□□□ -0.13
RFFL-204ENST00000414419 AOC3Q16853 763 aa14.25□□□□□ -0.13
RFFL-204ENST00000414419 SLC51AQ86UW1 340 aa14.25□□□□□ -0.13
RFFL-204ENST00000414419 SMC1BQ8NDV3 1235 aa14.25□□□□□ -0.13
RFFL-204ENST00000414419 RTFDC1Q9BY42 306 aaPredicted RBP14.25□□□□□ -0.13
RFFL-204ENST00000414419 ZNF541Q9H0D2 1346 aa14.24□□□□□ -0.13
RFFL-204ENST00000414419 F6X3S4 739 aa14.24□□□□□ -0.13
RFFL-204ENST00000414419 CTSWP56202 376 aa14.24□□□□□ -0.13
RFFL-204ENST00000414419 ANKRD18AQ8IVF6 992 aa14.24□□□□□ -0.13
RFFL-204ENST00000414419 MIER1Q8N108 512 aa14.24□□□□□ -0.13
RFFL-204ENST00000414419 GPC2Q8N158 579 aa14.24□□□□□ -0.13
RFFL-204ENST00000414419 SEC31BQ9NQW1 1179 aa14.24□□□□□ -0.13
RFFL-204ENST00000414419 GJA3Q9Y6H8 435 aa14.24□□□□□ -0.13
RFFL-204ENST00000414419 LRRC37AA6NMS7 1700 aa14.24□□□□□ -0.13
RFFL-204ENST00000414419 POTECB2RU33 542 aa14.23□□□□□ -0.13
RFFL-204ENST00000414419 C6orf229H3BNL8 230 aa14.23□□□□□ -0.13
RFFL-204ENST00000414419 SLC4A10Q6U841 1118 aa14.23□□□□□ -0.13
RFFL-204ENST00000414419 CDCA7LQ96GN5 454 aa14.23□□□□□ -0.13
RFFL-204ENST00000414419 L3MBTL3Q96JM7 780 aaPredicted RBP14.23□□□□□ -0.13
RFFL-204ENST00000414419 CDC5LQ99459 802 aaKnown RBP14.23□□□□□ -0.13
RFFL-204ENST00000414419 KIAA2012Q0VF49 1180 aa14.22□□□□□ -0.13
RFFL-204ENST00000414419 WASHC4Q2M389 1173 aa14.22□□□□□ -0.13
RFFL-204ENST00000414419 TTLL11Q8NHH1 800 aa14.22□□□□□ -0.13
RFFL-204ENST00000414419 EYA3Q99504 573 aa14.22□□□□□ -0.13
RFFL-204ENST00000414419 ANKIB1Q9P2G1 1089 aa14.22□□□□□ -0.13
RFFL-204ENST00000414419 HACL1Q9UJ83 578 aa14.22□□□□□ -0.13
RFFL-204ENST00000414419 ZNRF3Q9ULT6 936 aa14.22□□□□□ -0.13
RFFL-204ENST00000414419 SPEF2Q9C093 1822 aa14.22□□□□□ -0.13
RFFL-204ENST00000414419 LMOD1P29536 600 aaPredicted RBP14.21□□□□□ -0.13
RFFL-204ENST00000414419 APLP1P51693 650 aa14.21□□□□□ -0.13
RFFL-204ENST00000414419 GPSM2P81274 684 aa14.21□□□□□ -0.13
RFFL-204ENST00000414419 BEND3Q5T5X7 828 aa14.21□□□□□ -0.13
RFFL-204ENST00000414419 GREM2Q9H772 168 aa14.21□□□□□ -0.13
RFFL-204ENST00000414419 C9orf78Q9NZ63 289 aaPredicted RBP14.21□□□□□ -0.13
RFFL-204ENST00000414419 COL4A5P29400 1685 aa14.2□□□□□ -0.14
RFFL-204ENST00000414419 G3V3G9 751 aa14.2□□□□□ -0.14
RFFL-204ENST00000414419 RIMBP2O15034 1052 aa14.2□□□□□ -0.14
RFFL-204ENST00000414419 EAPPQ56P03 285 aaPredicted RBP14.2□□□□□ -0.14
RFFL-204ENST00000414419 DCAF8Q5TAQ9 597 aa14.2□□□□□ -0.14
RFFL-204ENST00000414419 MRPL50Q8N5N7 158 aaKnown RBP14.2□□□□□ -0.14
RFFL-204ENST00000414419 PLA2G12BQ9BX93 195 aa14.2□□□□□ -0.14
RFFL-204ENST00000414419 ZC3H12CQ9C0D7 883 aaKnown RBP14.2□□□□□ -0.14
RFFL-204ENST00000414419 SRCIN1Q9C0H9 1055 aa14.2□□□□□ -0.14
RFFL-204ENST00000414419 TAF1DQ9H5J8 278 aaPredicted RBP14.2□□□□□ -0.14
RFFL-204ENST00000414419 PTPRCP08575 1304 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 ALDH1L1O75891 902 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 CT47B1P0C2W7 299 aaPredicted RBP14.19□□□□□ -0.14
RFFL-204ENST00000414419 EPHX2P34913 555 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 IGHMBP2P38935 993 aaKnown RBP14.19□□□□□ -0.14
RFFL-204ENST00000414419 TNIP1Q15025 636 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 ALDH1L2Q3SY69 923 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 PNMA8AQ86V59 439 aaPredicted RBP14.19□□□□□ -0.14
RFFL-204ENST00000414419 TRMT2AQ8IZ69 625 aaKnown RBP14.19□□□□□ -0.14
RFFL-204ENST00000414419 SSH1Q8WYL5 1049 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 BCL2L13Q9BXK5 485 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 SMC4Q9NTJ3 1288 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 PODXL2Q9NZ53 605 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 POLLQ9UGP5 575 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 GGA1Q9UJY5 639 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 CHMP3Q9Y3E7 222 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 COL4A1P02462 1669 aa14.19□□□□□ -0.14
RFFL-204ENST00000414419 GRM8O00222 908 aa14.18□□□□□ -0.14
RFFL-204ENST00000414419 UFL1O94874 794 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms