RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 NLRP3Q96P20 1036 aa23.14■■□□□ 1.29
CIRBP-202ENST00000413636 BRIP1Q9BX63 1249 aa23.14■■□□□ 1.29
CIRBP-202ENST00000413636 LMBR1LQ6UX01 489 aa23.13■■□□□ 1.29
CIRBP-202ENST00000413636 RBM19Q9Y4C8 960 aaKnown RBP23.13■■□□□ 1.29
CIRBP-202ENST00000413636 C10orf71Q711Q0 1435 aa23.12■■□□□ 1.29
CIRBP-202ENST00000413636 RABL6Q3YEC7 729 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-202ENST00000413636 TTLL11Q8NHH1 800 aa23.12■■□□□ 1.29
CIRBP-202ENST00000413636 CCDC85AQ96PX6 553 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-202ENST00000413636 KIF13BQ9NQT8 1826 aa23.11■■□□□ 1.29
CIRBP-202ENST00000413636 CSF1RP07333 972 aa23.11■■□□□ 1.29
CIRBP-202ENST00000413636 CHMP3Q9Y3E7 222 aa23.11■■□□□ 1.29
CIRBP-202ENST00000413636 PDE6BP35913 854 aa23.1■■□□□ 1.29
CIRBP-202ENST00000413636 SF3B3Q15393 1217 aaKnown RBP23.1■■□□□ 1.29
CIRBP-202ENST00000413636 CEP85Q6P2H3 762 aa23.1■■□□□ 1.29
CIRBP-202ENST00000413636 KLRG2A4D1S0 409 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-202ENST00000413636 ATP8B2P98198 1209 aa23.08■■□□□ 1.29
CIRBP-202ENST00000413636 FAM161AQ3B820 660 aa23.08■■□□□ 1.29
CIRBP-202ENST00000413636 CCDC152Q4G0S7 254 aa23.08■■□□□ 1.29
CIRBP-202ENST00000413636 SMC5Q8IY18 1101 aa23.08■■□□□ 1.29
CIRBP-202ENST00000413636 GREM2Q9H772 168 aa23.08■■□□□ 1.29
CIRBP-202ENST00000413636 COL11A2P13942 1736 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-202ENST00000413636 PNMA6EA0A0J9YXQ4 647 aa23.08■■□□□ 1.28
CIRBP-202ENST00000413636 MTX1Q13505 466 aa23.08■■□□□ 1.28
CIRBP-202ENST00000413636 CRY2Q49AN0 593 aa23.08■■□□□ 1.28
CIRBP-202ENST00000413636 RPAP2Q8IXW5 612 aaPredicted RBP23.08■■□□□ 1.28
CIRBP-202ENST00000413636 PPP1R1BQ9UD71 204 aaPredicted RBP23.08■■□□□ 1.28
CIRBP-202ENST00000413636 SRGAP3O43295 1099 aa23.07■■□□□ 1.28
CIRBP-202ENST00000413636 KLHL34Q8N239 644 aa23.07■■□□□ 1.28
CIRBP-202ENST00000413636 GCC1Q96CN9 775 aa23.07■■□□□ 1.28
CIRBP-202ENST00000413636 C2CD5Q86YS7 1000 aa23.06■■□□□ 1.28
CIRBP-202ENST00000413636 SIRT2Q8IXJ6 389 aa23.06■■□□□ 1.28
CIRBP-202ENST00000413636 TAF1P21675 1872 aa23.06■■□□□ 1.28
CIRBP-202ENST00000413636 ITGA6P23229 1130 aa23.05■■□□□ 1.28
CIRBP-202ENST00000413636 RPGRQ92834 1020 aaKnown RBP23.05■■□□□ 1.28
CIRBP-202ENST00000413636 SEC31BQ9NQW1 1179 aa23.05■■□□□ 1.28
CIRBP-202ENST00000413636 PDZRN3Q9UPQ7 1066 aa23.05■■□□□ 1.28
CIRBP-202ENST00000413636 SRGNP10124 158 aa23.04■■□□□ 1.28
CIRBP-202ENST00000413636 CHRNA5P30532 468 aa23.04■■□□□ 1.28
CIRBP-202ENST00000413636 RGS3P49796 1198 aa23.04■■□□□ 1.28
CIRBP-202ENST00000413636 IFIT5Q13325 482 aaKnown RBP23.04■■□□□ 1.28
CIRBP-202ENST00000413636 CCDC57Q2TAC2 916 aa23.04■■□□□ 1.28
CIRBP-202ENST00000413636 RTL9Q8NET4 1388 aa23.04■■□□□ 1.28
CIRBP-202ENST00000413636 H0YIN7 160 aa23.04■■□□□ 1.28
CIRBP-202ENST00000413636 DDX46Q7L014 1031 aaKnown RBP23.04■■□□□ 1.28
CIRBP-202ENST00000413636 SSH3Q8TE77 659 aa23.04■■□□□ 1.28
CIRBP-202ENST00000413636 CD2APQ9Y5K6 639 aa23.04■■□□□ 1.28
CIRBP-202ENST00000413636 COL4A1P02462 1669 aa23.03■■□□□ 1.28
CIRBP-202ENST00000413636 KIAA1551Q9HCM1 1747 aa23.03■■□□□ 1.28
CIRBP-202ENST00000413636 ANKRD18BA2A2Z9 1011 aa23.03■■□□□ 1.28
CIRBP-202ENST00000413636 PDE4AP27815 886 aa23.03■■□□□ 1.28
CIRBP-202ENST00000413636 RBM17Q96I25 401 aaKnown RBP23.03■■□□□ 1.28
CIRBP-202ENST00000413636 RFX5P48382 616 aaPredicted RBP23.02■■□□□ 1.28
CIRBP-202ENST00000413636 POLA2Q14181 598 aa23.02■■□□□ 1.28
CIRBP-202ENST00000413636 DLEC1Q9Y238 1755 aa23.02■■□□□ 1.28
CIRBP-202ENST00000413636 HMMRO75330 724 aa23.01■■□□□ 1.27
CIRBP-202ENST00000413636 NPR1P16066 1061 aa23.01■■□□□ 1.27
CIRBP-202ENST00000413636 HOXA10P31260 410 aaPredicted RBP23.01■■□□□ 1.27
CIRBP-202ENST00000413636 KLHDC4Q8TBB5 520 aa23.01■■□□□ 1.27
CIRBP-202ENST00000413636 MASTLQ96GX5 879 aa23.01■■□□□ 1.27
CIRBP-202ENST00000413636 ZNF594Q96JF6 807 aaPredicted RBP23.01■■□□□ 1.27
CIRBP-202ENST00000413636 BACH2Q9BYV9 841 aa23.01■■□□□ 1.27
CIRBP-202ENST00000413636 SPEF2Q9C093 1822 aa23.01■■□□□ 1.27
CIRBP-202ENST00000413636 A0A0G2JLW4 131 aa23■■□□□ 1.27
CIRBP-202ENST00000413636 DPEP1P16444 411 aa23■■□□□ 1.27
CIRBP-202ENST00000413636 TGFB2P61812 414 aa23■■□□□ 1.27
CIRBP-202ENST00000413636 TAF7LQ5H9L4 462 aa23■■□□□ 1.27
CIRBP-202ENST00000413636 SKAP1Q86WV1 359 aa23■■□□□ 1.27
CIRBP-202ENST00000413636 ZNF622Q969S3 477 aaKnown RBP eCLIP23■■□□□ 1.27
CIRBP-202ENST00000413636 CELF1Q92879 486 aaKnown RBP23■■□□□ 1.27
CIRBP-202ENST00000413636 CRAMP1Q96RY5 1269 aa23■■□□□ 1.27
CIRBP-202ENST00000413636 CDC5LQ99459 802 aaKnown RBP23■■□□□ 1.27
CIRBP-202ENST00000413636 PA2G4Q9UQ80 394 aaKnown RBP23■■□□□ 1.27
CIRBP-202ENST00000413636 CACNA1SQ13698 1873 aa23■■□□□ 1.27
CIRBP-202ENST00000413636 PTPN12Q05209 780 aaKnown RBP22.99■■□□□ 1.27
CIRBP-202ENST00000413636 STYK1Q6J9G0 422 aa22.99■■□□□ 1.27
CIRBP-202ENST00000413636 FHDC1Q9C0D6 1143 aaPredicted RBP22.99■■□□□ 1.27
CIRBP-202ENST00000413636 LRP5O75197 1615 aa22.99■■□□□ 1.27
CIRBP-202ENST00000413636 NUCB1Q02818 461 aa22.98■■□□□ 1.27
CIRBP-202ENST00000413636 GRAPQ13588 217 aa22.98■■□□□ 1.27
CIRBP-202ENST00000413636 ANKRD18AQ8IVF6 992 aa22.98■■□□□ 1.27
CIRBP-202ENST00000413636 GRAPLQ8TC17 118 aaPredicted RBP22.98■■□□□ 1.27
CIRBP-202ENST00000413636 KCNA3P22001 575 aa22.97■■□□□ 1.27
CIRBP-202ENST00000413636 COPRSQ9NQ92 184 aa22.97■■□□□ 1.27
CIRBP-202ENST00000413636 IGHMBP2P38935 993 aaKnown RBP22.97■■□□□ 1.27
CIRBP-202ENST00000413636 RPS8P62241 208 aaKnown RBP22.97■■□□□ 1.27
CIRBP-202ENST00000413636 NLGN2Q8NFZ4 835 aa22.97■■□□□ 1.27
CIRBP-202ENST00000413636 SIL1Q9H173 461 aa22.97■■□□□ 1.27
CIRBP-202ENST00000413636 ALDH1B1P30837 517 aa22.96■■□□□ 1.27
CIRBP-202ENST00000413636 SURF6O75683 361 aaKnown RBP22.95■■□□□ 1.26
CIRBP-202ENST00000413636 LDHAL6AQ6ZMR3 332 aa22.95■■□□□ 1.26
CIRBP-202ENST00000413636 CNKSR1Q969H4 720 aa22.95■■□□□ 1.26
CIRBP-202ENST00000413636 MPHOSPH8Q99549 860 aa22.95■■□□□ 1.26
CIRBP-202ENST00000413636 PUS3Q9BZE2 481 aaKnown RBP22.95■■□□□ 1.26
CIRBP-202ENST00000413636 DCTPP1Q9H773 170 aa22.95■■□□□ 1.26
CIRBP-202ENST00000413636 SLX4Q8IY92 1834 aa22.95■■□□□ 1.26
CIRBP-202ENST00000413636 BRCA1P38398 1863 aaKnown RBP22.94■■□□□ 1.26
CIRBP-202ENST00000413636 EXOC6BQ9Y2D4 811 aa22.94■■□□□ 1.26
CIRBP-202ENST00000413636 LRRC24Q50LG9 513 aa22.93■■□□□ 1.26
CIRBP-202ENST00000413636 CHD1LQ86WJ1 897 aa22.93■■□□□ 1.26
CIRBP-202ENST00000413636 EYA2O00167 538 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms