RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 TRAIPQ9BWF2 469 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 TRPV5Q9NQA5 729 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 N6AMT1Q9Y5N5 214 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 CDC42BPAQ5VT25 1732 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 TPM4P67936 248 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 DEUP1Q05D60 604 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 GPS2Q13227 327 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 RNF20Q5VTR2 975 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 SLC4A1APQ9BWU0 796 aaKnown RBP6.08□□□□□ -1.44
HERC4-205ENST00000412272 KCNF1Q9H3M0 494 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 PYCARDQ9ULZ3 195 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 ITM2BQ9Y287 266 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 MYO5CQ9NQX4 1742 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 EIF4BP23588 611 aaKnown RBP6.08□□□□□ -1.44
HERC4-205ENST00000412272 TMEM62Q0P6H9 643 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 PRPF4BQ13523 1007 aaKnown RBP6.08□□□□□ -1.44
HERC4-205ENST00000412272 SYNE3Q6ZMZ3 975 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 ANKRD18AQ8IVF6 992 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 JPH2Q9BR39 696 aaPredicted RBP6.08□□□□□ -1.44
HERC4-205ENST00000412272 PDRG1Q9NUG6 133 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 RTEL1Q9NZ71 1219 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 ADCY10Q96PN6 1610 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 IQCB1Q15051 598 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 CCDC70Q6NSX1 233 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 TSGA10Q9BZW7 698 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 MMADHCQ9H3L0 296 aaPredicted RBP6.07□□□□□ -1.44
HERC4-205ENST00000412272 KCND1Q9NSA2 647 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 MYOM2P54296 1465 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 ABCC5O15440 1437 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 KDRP35968 1356 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 ZC3H4Q9UPT8 1303 aaKnown RBP6.07□□□□□ -1.44
HERC4-205ENST00000412272 A0A087WUV0 522 aaPredicted RBP6.07□□□□□ -1.44
HERC4-205ENST00000412272 POLR3GO15318 223 aaPredicted RBP6.07□□□□□ -1.44
HERC4-205ENST00000412272 MAP4K4O95819 1239 aaPredicted RBP6.07□□□□□ -1.44
HERC4-205ENST00000412272 DDR1Q08345 913 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 WDR78Q5VTH9 848 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 KIAA0825Q8IV33 1275 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 SPC24Q8NBT2 197 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 EXOC4Q96A65 974 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 SENP3Q9H4L4 574 aaPredicted RBP6.07□□□□□ -1.44
HERC4-205ENST00000412272 RABL2AQ9UBK7 228 aaPredicted RBP6.07□□□□□ -1.44
HERC4-205ENST00000412272 NRBP1Q9UHY1 535 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 ADGRB2O60241 1585 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 DNMBPQ6XZF7 1577 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 WDR7Q9Y4E6 1490 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 KIF5CO60282 957 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 RDXP35241 583 aaKnown RBP6.07□□□□□ -1.44
HERC4-205ENST00000412272 MPP3Q13368 585 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 SLC35B4Q969S0 331 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 FAM81BQ96LP2 452 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 TPX2Q9ULW0 747 aaKnown RBP6.07□□□□□ -1.44
HERC4-205ENST00000412272 COG6Q9Y2V7 657 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 ASXL1Q8IXJ9 1541 aa6.07□□□□□ -1.44
HERC4-205ENST00000412272 PRAG1Q86YV5 1406 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 AATKQ6ZMQ8 1374 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 TPPPO94811 219 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 SFSWAPQ12872 951 aaKnown RBP6.06□□□□□ -1.44
HERC4-205ENST00000412272 LAMB3Q13751 1172 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 ZRSR1Q15695 479 aaKnown RBP6.06□□□□□ -1.44
HERC4-205ENST00000412272 PARP9Q8IXQ6 854 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 NBPF15Q8N660 670 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 B4GALNT2Q8NHY0 566 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 RSPH1Q8WYR4 309 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 ADGRL1O94910 1474 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 BDNFP23560 247 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 GCKP35557 465 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 USP8P40818 1118 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 SEZ6LQ9BYH1 1024 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 TSPY26PQ9H489 355 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 MKS1Q9NXB0 559 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 BARX2Q9UMQ3 279 aaPredicted RBP6.06□□□□□ -1.44
HERC4-205ENST00000412272 SHANK2Q9UPX8 1470 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 USP32Q8NFA0 1604 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 ATP8B1O43520 1251 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 VDRP11473 427 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 SMARCA1P28370 1054 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 APLP1P51693 650 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 IRF5Q13568 498 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 DBN1Q16643 649 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 WLSQ5T9L3 541 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 MTHFD1LQ6UB35 978 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 SPDYE1Q8NFV5 336 aaPredicted RBP6.06□□□□□ -1.44
HERC4-205ENST00000412272 MTRQ99707 1265 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 TMEM63CQ9P1W3 806 aa6.06□□□□□ -1.44
HERC4-205ENST00000412272 SPDYE3A6NKU9 549 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 STK10O94804 968 aaKnown RBP6.05□□□□□ -1.44
HERC4-205ENST00000412272 MMEP08473 750 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 NBPF7P0C2Y1 421 aaPredicted RBP6.05□□□□□ -1.44
HERC4-205ENST00000412272 RANBP1P43487 201 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 ELF2Q15723 593 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 FILIP1LQ4L180 1135 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 KLHL10Q6JEL2 608 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 ERC1Q8IUD2 1116 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 EPAS1Q99814 870 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 MRFAP1Q9Y605 127 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 UNCXA6NJT0 531 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 HTATSF1O43719 755 aaKnown RBP6.05□□□□□ -1.44
HERC4-205ENST00000412272 MYO1BO43795 1136 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 ATP6V1G1O75348 118 aa6.05□□□□□ -1.44
HERC4-205ENST00000412272 MCCD1P59942 119 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms