RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 CTSWP56202 376 aa30.17■■■□□ 2.42
UBE2E3-202ENST00000410062 ARHGAP45Q92619 1136 aa30.17■■■□□ 2.42
UBE2E3-202ENST00000410062 MYH3P11055 1940 aa30.17■■■□□ 2.42
UBE2E3-202ENST00000410062 GRAPQ13588 217 aa30.16■■■□□ 2.42
UBE2E3-202ENST00000410062 CCDC152Q4G0S7 254 aa30.16■■■□□ 2.42
UBE2E3-202ENST00000410062 GRAPLQ8TC17 118 aaPredicted RBP30.16■■■□□ 2.42
UBE2E3-202ENST00000410062 NFKBIEO00221 500 aa30.15■■■□□ 2.42
UBE2E3-202ENST00000410062 YY1P25490 414 aa30.15■■■□□ 2.42
UBE2E3-202ENST00000410062 CCDC93Q567U6 631 aa30.15■■■□□ 2.42
UBE2E3-202ENST00000410062 SOGA3Q5TF21 947 aa30.15■■■□□ 2.42
UBE2E3-202ENST00000410062 COL4A1P02462 1669 aa30.15■■■□□ 2.42
UBE2E3-202ENST00000410062 FER1L6Q2WGJ9 1857 aa30.15■■■□□ 2.42
UBE2E3-202ENST00000410062 IPO8O15397 1037 aaKnown RBP30.15■■■□□ 2.42
UBE2E3-202ENST00000410062 TTLL11Q8NHH1 800 aa30.15■■■□□ 2.42
UBE2E3-202ENST00000410062 PLA2G12BQ9BX93 195 aa30.15■■■□□ 2.42
UBE2E3-202ENST00000410062 SEC31BQ9NQW1 1179 aa30.15■■■□□ 2.42
UBE2E3-202ENST00000410062 CELF1Q92879 486 aaKnown RBP30.14■■■□□ 2.42
UBE2E3-202ENST00000410062 TNNQ9UQP3 1299 aa30.14■■■□□ 2.42
UBE2E3-202ENST00000410062 BBOX1O75936 387 aa30.13■■■□□ 2.41
UBE2E3-202ENST00000410062 NBPF7P0C2Y1 421 aaPredicted RBP30.12■■■□□ 2.41
UBE2E3-202ENST00000410062 TRIM27P14373 513 aa30.12■■■□□ 2.41
UBE2E3-202ENST00000410062 ATF7IPQ6VMQ6 1270 aa30.12■■■□□ 2.41
UBE2E3-202ENST00000410062 SBF1O95248 1867 aa30.12■■■□□ 2.41
UBE2E3-202ENST00000410062 CCT4P50991 539 aaKnown RBP30.11■■■□□ 2.41
UBE2E3-202ENST00000410062 GREM2Q9H772 168 aa30.11■■■□□ 2.41
UBE2E3-202ENST00000410062 ATP6V0A2Q9Y487 856 aa30.11■■■□□ 2.41
UBE2E3-202ENST00000410062 PRELPP51888 382 aa30.11■■■□□ 2.41
UBE2E3-202ENST00000410062 ZKSCAN2Q63HK3 967 aa30.1■■■□□ 2.41
UBE2E3-202ENST00000410062 CLUAP1Q96AJ1 413 aa30.1■■■□□ 2.41
UBE2E3-202ENST00000410062 TAOK3Q9H2K8 898 aa30.1■■■□□ 2.41
UBE2E3-202ENST00000410062 UTYO14607 1347 aa30.09■■■□□ 2.41
UBE2E3-202ENST00000410062 FOXO4P98177 505 aa30.09■■■□□ 2.41
UBE2E3-202ENST00000410062 EPHA10Q5JZY3 1008 aa30.09■■■□□ 2.41
UBE2E3-202ENST00000410062 C9orf131Q5VYM1 1079 aa30.09■■■□□ 2.41
UBE2E3-202ENST00000410062 RTKN2Q8IZC4 609 aa30.09■■■□□ 2.41
UBE2E3-202ENST00000410062 USP44Q9H0E7 712 aa30.09■■■□□ 2.41
UBE2E3-202ENST00000410062 RPS8P62241 208 aaKnown RBP30.08■■■□□ 2.41
UBE2E3-202ENST00000410062 CC2D2BQ6DHV5 1058 aa30.08■■■□□ 2.41
UBE2E3-202ENST00000410062 RNF181Q9P0P0 153 aa30.08■■■□□ 2.41
UBE2E3-202ENST00000410062 SNED1Q8TER0 1413 aa30.08■■■□□ 2.41
UBE2E3-202ENST00000410062 CSF1RP07333 972 aa30.07■■■□□ 2.4
UBE2E3-202ENST00000410062 SP8Q8IXZ3 490 aa30.07■■■□□ 2.4
UBE2E3-202ENST00000410062 SUCLG2Q96I99 432 aa30.07■■■□□ 2.4
UBE2E3-202ENST00000410062 TMX4Q9H1E5 349 aaPredicted RBP30.07■■■□□ 2.4
UBE2E3-202ENST00000410062 CCDC88AQ3V6T2 1871 aa30.07■■■□□ 2.4
UBE2E3-202ENST00000410062 LMNB1P20700 586 aa30.07■■■□□ 2.4
UBE2E3-202ENST00000410062 FAM161AQ3B820 660 aa30.07■■■□□ 2.4
UBE2E3-202ENST00000410062 RCAN3Q9UKA8 241 aa30.07■■■□□ 2.4
UBE2E3-202ENST00000410062 LTBP3Q9NS15 1303 aa30.06■■■□□ 2.4
UBE2E3-202ENST00000410062 FKBP4Q02790 459 aaKnown RBP eCLIP30.06■■■□□ 2.4
UBE2E3-202ENST00000410062 KAZALD1Q96I82 304 aa30.06■■■□□ 2.4
UBE2E3-202ENST00000410062 RTL9Q8NET4 1388 aa30.06■■■□□ 2.4
UBE2E3-202ENST00000410062 INTS3Q68E01 1043 aaKnown RBP30.05■■■□□ 2.4
UBE2E3-202ENST00000410062 TMC4Q7Z404 712 aa30.05■■■□□ 2.4
UBE2E3-202ENST00000410062 LMBR1LQ6UX01 489 aa30.04■■■□□ 2.4
UBE2E3-202ENST00000410062 CHMP3Q9Y3E7 222 aa30.04■■■□□ 2.4
UBE2E3-202ENST00000410062 ITGA6P23229 1130 aa30.03■■■□□ 2.4
UBE2E3-202ENST00000410062 ANKRD18AQ8IVF6 992 aa30.03■■■□□ 2.4
UBE2E3-202ENST00000410062 CDC5LQ99459 802 aaKnown RBP30.03■■■□□ 2.4
UBE2E3-202ENST00000410062 ZNF277Q9NRM2 450 aaPredicted RBP30.03■■■□□ 2.4
UBE2E3-202ENST00000410062 LRRC37AA6NMS7 1700 aa30.02■■■□□ 2.4
UBE2E3-202ENST00000410062 GRIPAP1Q4V328 841 aa30.02■■■□□ 2.4
UBE2E3-202ENST00000410062 PSMD1Q99460 953 aa30.02■■■□□ 2.4
UBE2E3-202ENST00000410062 BICC1Q9H694 974 aaKnown RBP30.01■■■□□ 2.39
UBE2E3-202ENST00000410062 SPEF2Q9C093 1822 aa30.01■■■□□ 2.39
UBE2E3-202ENST00000410062 MPNDQ8N594 471 aa30■■■□□ 2.39
UBE2E3-202ENST00000410062 DPP8Q6V1X1 898 aaPredicted RBP29.99■■■□□ 2.39
UBE2E3-202ENST00000410062 FTSJ3Q8IY81 847 aaKnown RBP29.99■■■□□ 2.39
UBE2E3-202ENST00000410062 TMEM57Q8N5G2 664 aa29.99■■■□□ 2.39
UBE2E3-202ENST00000410062 ANKRD18BA2A2Z9 1011 aa29.98■■■□□ 2.39
UBE2E3-202ENST00000410062 UBTFL1P0CB47 393 aaPredicted RBP29.98■■■□□ 2.39
UBE2E3-202ENST00000410062 MEIS3Q99687 375 aa29.98■■■□□ 2.39
UBE2E3-202ENST00000410062 RLBP1P12271 317 aa29.98■■■□□ 2.39
UBE2E3-202ENST00000410062 IFIT5Q13325 482 aaKnown RBP29.98■■■□□ 2.39
UBE2E3-202ENST00000410062 DZIP1LQ8IYY4 767 aaKnown RBP29.98■■■□□ 2.39
UBE2E3-202ENST00000410062 NSFL1CQ9UNZ2 370 aaKnown RBP29.98■■■□□ 2.39
UBE2E3-202ENST00000410062 GPSM2P81274 684 aa29.97■■■□□ 2.39
UBE2E3-202ENST00000410062 ANKRD44Q8N8A2 993 aa29.97■■■□□ 2.39
UBE2E3-202ENST00000410062 DICER1Q9UPY3 1922 aaKnown RBP29.97■■■□□ 2.39
UBE2E3-202ENST00000410062 IGHMBP2P38935 993 aaKnown RBP29.96■■■□□ 2.39
UBE2E3-202ENST00000410062 IARSP41252 1262 aaKnown RBP29.96■■■□□ 2.39
UBE2E3-202ENST00000410062 BSDC1Q9NW68 430 aaPredicted RBP29.96■■■□□ 2.39
UBE2E3-202ENST00000410062 TIAM2Q8IVF5 1701 aa29.96■■■□□ 2.39
UBE2E3-202ENST00000410062 CCDC57Q2TAC2 916 aa29.95■■■□□ 2.39
UBE2E3-202ENST00000410062 RABL6Q3YEC7 729 aaPredicted RBP29.95■■■□□ 2.39
UBE2E3-202ENST00000410062 PLIN1O60240 522 aa29.94■■■□□ 2.38
UBE2E3-202ENST00000410062 ZNF784Q8NCA9 323 aaPredicted RBP29.94■■■□□ 2.38
UBE2E3-202ENST00000410062 RTFDC1Q9BY42 306 aaPredicted RBP29.94■■■□□ 2.38
UBE2E3-202ENST00000410062 DUOX1Q9NRD9 1551 aa29.94■■■□□ 2.38
UBE2E3-202ENST00000410062 ZNF594Q96JF6 807 aaPredicted RBP29.94■■■□□ 2.38
UBE2E3-202ENST00000410062 MPHOSPH8Q99549 860 aa29.94■■■□□ 2.38
UBE2E3-202ENST00000410062 ZNF526Q8TF50 670 aaPredicted RBP29.93■■■□□ 2.38
UBE2E3-202ENST00000410062 LRRFIP2Q9Y608 721 aaKnown RBP29.93■■■□□ 2.38
UBE2E3-202ENST00000410062 LTBP1Q14766 1721 aa29.92■■■□□ 2.38
UBE2E3-202ENST00000410062 SUPT20HQ8NEM7 779 aa29.92■■■□□ 2.38
UBE2E3-202ENST00000410062 PANK1Q8TE04 598 aa29.92■■■□□ 2.38
UBE2E3-202ENST00000410062 ANKIB1Q9P2G1 1089 aa29.92■■■□□ 2.38
UBE2E3-202ENST00000410062 MINPP1Q9UNW1 487 aa29.92■■■□□ 2.38
UBE2E3-202ENST00000410062 AOC3Q16853 763 aa29.91■■■□□ 2.38
UBE2E3-202ENST00000410062 TAF7LQ5H9L4 462 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms