RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 COL22A1Q8NFW1 1626 aaPredicted RBP12.05□□□□□ -0.48
CUL1-202ENST00000409469 TJP1Q07157 1748 aa12.05□□□□□ -0.48
CUL1-202ENST00000409469 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.05□□□□□ -0.48
CUL1-202ENST00000409469 TCIRG1Q13488 830 aa12.05□□□□□ -0.48
CUL1-202ENST00000409469 KIF6Q6ZMV9 814 aa12.05□□□□□ -0.48
CUL1-202ENST00000409469 TOM1O60784 492 aa12.04□□□□□ -0.48
CUL1-202ENST00000409469 SSFA2P28290 1259 aa12.04□□□□□ -0.48
CUL1-202ENST00000409469 FOXD4L5Q5VV16 416 aaPredicted RBP12.04□□□□□ -0.48
CUL1-202ENST00000409469 CCDC191Q8NCU4 936 aa12.04□□□□□ -0.48
CUL1-202ENST00000409469 FOXD4L4Q8WXT5 416 aaPredicted RBP12.04□□□□□ -0.48
CUL1-202ENST00000409469 TNPO1Q92973 898 aaKnown RBP12.04□□□□□ -0.48
CUL1-202ENST00000409469 DOT1LQ8TEK3 1739 aa12.04□□□□□ -0.48
CUL1-202ENST00000409469 A0A0D9SFI3 127 aa12.04□□□□□ -0.48
CUL1-202ENST00000409469 NMIQ13287 307 aaPredicted RBP12.04□□□□□ -0.48
CUL1-202ENST00000409469 ATG9AQ7Z3C6 839 aa12.04□□□□□ -0.48
CUL1-202ENST00000409469 FSD1Q9BTV5 496 aa12.04□□□□□ -0.48
CUL1-202ENST00000409469 LSG1Q9H089 658 aaKnown RBP12.04□□□□□ -0.48
CUL1-202ENST00000409469 GZF1Q9H116 711 aaPredicted RBP12.04□□□□□ -0.48
CUL1-202ENST00000409469 ST18O60284 1047 aa12.04□□□□□ -0.48
CUL1-202ENST00000409469 DDX46Q7L014 1031 aaKnown RBP12.04□□□□□ -0.48
CUL1-202ENST00000409469 ISCA1Q9BUE6 129 aa12.04□□□□□ -0.48
CUL1-202ENST00000409469 NGLY1Q96IV0 654 aa12.03□□□□□ -0.48
CUL1-202ENST00000409469 CWC22Q9HCG8 908 aaKnown RBP12.03□□□□□ -0.48
CUL1-202ENST00000409469 ATP6V1AP38606 617 aa12.03□□□□□ -0.48
CUL1-202ENST00000409469 SPATA31A5Q5VU36 1347 aa12.03□□□□□ -0.48
CUL1-202ENST00000409469 SPATA31A7Q8IWB4 1347 aa12.03□□□□□ -0.48
CUL1-202ENST00000409469 RAD50Q92878 1312 aa12.03□□□□□ -0.48
CUL1-202ENST00000409469 MCM4P33991 863 aa12.02□□□□□ -0.48
CUL1-202ENST00000409469 ZNF589Q86UQ0 364 aaPredicted RBP12.02□□□□□ -0.48
CUL1-202ENST00000409469 EVI5LQ96CN4 794 aa12.02□□□□□ -0.48
CUL1-202ENST00000409469 SEC62Q99442 399 aaKnown RBP12.02□□□□□ -0.48
CUL1-202ENST00000409469 TAF6LQ9Y6J9 622 aa12.02□□□□□ -0.48
CUL1-202ENST00000409469 MAP3K15Q6ZN16 1313 aa12.02□□□□□ -0.49
CUL1-202ENST00000409469 MCCP23508 829 aa12.02□□□□□ -0.49
CUL1-202ENST00000409469 HSPA4P34932 840 aa12.02□□□□□ -0.49
CUL1-202ENST00000409469 ITPK1Q13572 414 aa12.02□□□□□ -0.49
CUL1-202ENST00000409469 PRPF40BQ6NWY9 871 aaKnown RBP12.02□□□□□ -0.49
CUL1-202ENST00000409469 DZIP3Q86Y13 1208 aaKnown RBP12.02□□□□□ -0.49
CUL1-202ENST00000409469 GSE1Q14687 1217 aa12.01□□□□□ -0.49
CUL1-202ENST00000409469 ADCK5Q3MIX3 580 aa12.01□□□□□ -0.49
CUL1-202ENST00000409469 GIGYF2Q6Y7W6 1299 aaKnown RBP12.01□□□□□ -0.49
CUL1-202ENST00000409469 CCDC129Q6ZRS4 1044 aa12.01□□□□□ -0.49
CUL1-202ENST00000409469 KIAA1211Q6ZU35 1233 aa12.01□□□□□ -0.49
CUL1-202ENST00000409469 TMX3Q96JJ7 454 aa12.01□□□□□ -0.49
CUL1-202ENST00000409469 SNX14Q9Y5W7 946 aa12.01□□□□□ -0.49
CUL1-202ENST00000409469 SECISBP2LQ93073 1101 aaKnown RBP12.01□□□□□ -0.49
CUL1-202ENST00000409469 UBN2Q6ZU65 1347 aa12.01□□□□□ -0.49
CUL1-202ENST00000409469 NRAPQ86VF7 1730 aa12.01□□□□□ -0.49
CUL1-202ENST00000409469 NLRP10Q86W26 655 aa12.01□□□□□ -0.49
CUL1-202ENST00000409469 TICAM2Q86XR7 235 aa12.01□□□□□ -0.49
CUL1-202ENST00000409469 TEX13AQ9BXU3 409 aaPredicted RBP12.01□□□□□ -0.49
CUL1-202ENST00000409469 CRKLP46109 303 aaKnown RBP12□□□□□ -0.49
CUL1-202ENST00000409469 CCDC57Q2TAC2 916 aa12□□□□□ -0.49
CUL1-202ENST00000409469 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
CUL1-202ENST00000409469 GREM2Q9H772 168 aa12□□□□□ -0.49
CUL1-202ENST00000409469 TRMT112Q9UI30 125 aaKnown RBP12□□□□□ -0.49
CUL1-202ENST00000409469 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
CUL1-202ENST00000409469 ADORA1P30542 326 aa12□□□□□ -0.49
CUL1-202ENST00000409469 SIK1P57059 783 aa12□□□□□ -0.49
CUL1-202ENST00000409469 RAB3GAP1Q15042 981 aa12□□□□□ -0.49
CUL1-202ENST00000409469 SNRKQ9NRH2 765 aa12□□□□□ -0.49
CUL1-202ENST00000409469 A0A1B0GUL7 405 aa11.99□□□□□ -0.49
CUL1-202ENST00000409469 EYA2O00167 538 aa11.99□□□□□ -0.49
CUL1-202ENST00000409469 PI16Q6UXB8 463 aa11.99□□□□□ -0.49
CUL1-202ENST00000409469 WNK3Q9BYP7 1800 aa11.99□□□□□ -0.49
CUL1-202ENST00000409469 GOLIM4O00461 696 aa11.99□□□□□ -0.49
CUL1-202ENST00000409469 HCLS1P14317 486 aaPredicted RBP11.99□□□□□ -0.49
CUL1-202ENST00000409469 CASTP20810 708 aaKnown RBP11.99□□□□□ -0.49
CUL1-202ENST00000409469 COL15A1P39059 1388 aa11.99□□□□□ -0.49
CUL1-202ENST00000409469 KCNJ4P48050 445 aa11.99□□□□□ -0.49
CUL1-202ENST00000409469 FOXD4L6Q3SYB3 417 aaPredicted RBP11.99□□□□□ -0.49
CUL1-202ENST00000409469 INTS5Q6P9B9 1019 aaKnown RBP11.99□□□□□ -0.49
CUL1-202ENST00000409469 FOXD4L3Q6VB84 417 aaPredicted RBP11.99□□□□□ -0.49
CUL1-202ENST00000409469 ZBTB38Q8NAP3 1195 aaPredicted RBP11.99□□□□□ -0.49
CUL1-202ENST00000409469 SLIT2O94813 1529 aa11.98□□□□□ -0.49
CUL1-202ENST00000409469 SNAP23O00161 211 aa11.98□□□□□ -0.49
CUL1-202ENST00000409469 RBM8AQ9Y5S9 174 aaKnown RBP11.98□□□□□ -0.49
CUL1-202ENST00000409469 HSP90AB3PQ58FF7 597 aa11.98□□□□□ -0.49
CUL1-202ENST00000409469 LRP6O75581 1613 aa11.98□□□□□ -0.49
CUL1-202ENST00000409469 PALLDQ8WX93 1383 aa11.97□□□□□ -0.49
CUL1-202ENST00000409469 CCDC171Q6TFL3 1326 aa11.97□□□□□ -0.49
CUL1-202ENST00000409469 IRS4O14654 1257 aaPredicted RBP11.97□□□□□ -0.49
CUL1-202ENST00000409469 PCCAP05165 728 aaPredicted RBP11.97□□□□□ -0.49
CUL1-202ENST00000409469 ATP5JP18859 108 aa11.97□□□□□ -0.49
CUL1-202ENST00000409469 ITGA6P23229 1130 aa11.97□□□□□ -0.49
CUL1-202ENST00000409469 JAKMIP1Q96N16 626 aaKnown RBP11.97□□□□□ -0.49
CUL1-202ENST00000409469 KCNG1Q9UIX4 513 aa11.97□□□□□ -0.49
CUL1-202ENST00000409469 LARGE1O95461 756 aa11.97□□□□□ -0.49
CUL1-202ENST00000409469 AK2P54819 239 aa11.97□□□□□ -0.49
CUL1-202ENST00000409469 HELBQ8NG08 1087 aaPredicted RBP11.97□□□□□ -0.49
CUL1-202ENST00000409469 TTLL11Q8NHH1 800 aa11.97□□□□□ -0.49
CUL1-202ENST00000409469 THRAP3Q9Y2W1 955 aaKnown RBP11.97□□□□□ -0.49
CUL1-202ENST00000409469 IL15P40933 162 aaPredicted RBP11.97□□□□□ -0.49
CUL1-202ENST00000409469 FKBP4Q02790 459 aaKnown RBP eCLIP11.97□□□□□ -0.49
CUL1-202ENST00000409469 IFIT5Q13325 482 aaKnown RBP11.97□□□□□ -0.49
CUL1-202ENST00000409469 SCARF1Q14162 830 aa11.97□□□□□ -0.49
CUL1-202ENST00000409469 GLIPR1L2Q4G1C9 344 aa11.97□□□□□ -0.49
CUL1-202ENST00000409469 RUFY2Q8WXA3 655 aa11.97□□□□□ -0.49
CUL1-202ENST00000409469 CCDC87Q9NVE4 849 aa11.97□□□□□ -0.49
CUL1-202ENST00000409469 BCL9LQ86UU0 1499 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms