RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.88■□□□□ 0.13
COL6A2-204ENST00000409416 KDRP35968 1356 aa15.88■□□□□ 0.13
COL6A2-204ENST00000409416 F13A1P00488 732 aa15.88■□□□□ 0.13
COL6A2-204ENST00000409416 ARHGEF25Q86VW2 580 aa15.88■□□□□ 0.13
COL6A2-204ENST00000409416 HYPKQ9NX55 129 aa15.88■□□□□ 0.13
COL6A2-204ENST00000409416 ATP6V1DQ9Y5K8 247 aa15.88■□□□□ 0.13
COL6A2-204ENST00000409416 CNNM1Q9NRU3 951 aa15.88■□□□□ 0.13
COL6A2-204ENST00000409416 TTLL5Q6EMB2 1281 aa15.87■□□□□ 0.13
COL6A2-204ENST00000409416 LINS1Q8NG48 757 aa15.87■□□□□ 0.13
COL6A2-204ENST00000409416 PDLIM2Q96JY6 352 aa15.87■□□□□ 0.13
COL6A2-204ENST00000409416 SETD1AO15047 1707 aaKnown RBP15.87■□□□□ 0.13
COL6A2-204ENST00000409416 AGLP35573 1532 aa15.87■□□□□ 0.13
COL6A2-204ENST00000409416 SASH1O94885 1247 aa15.87■□□□□ 0.13
COL6A2-204ENST00000409416 SF3A1Q15459 793 aaKnown RBP15.87■□□□□ 0.13
COL6A2-204ENST00000409416 LRRC24Q50LG9 513 aa15.87■□□□□ 0.13
COL6A2-204ENST00000409416 A0A0G2JLW4 131 aa15.87■□□□□ 0.13
COL6A2-204ENST00000409416 ZRSR1Q15695 479 aaKnown RBP15.87■□□□□ 0.13
COL6A2-204ENST00000409416 FAM182BQ5T319 152 aa15.87■□□□□ 0.13
COL6A2-204ENST00000409416 DIP2BQ9P265 1576 aa15.86■□□□□ 0.13
COL6A2-204ENST00000409416 CSPP1Q1MSJ5 1256 aa15.86■□□□□ 0.13
COL6A2-204ENST00000409416 CREB3L3Q68CJ9 461 aa15.86■□□□□ 0.13
COL6A2-204ENST00000409416 C19orf44Q9H6X5 657 aa15.86■□□□□ 0.13
COL6A2-204ENST00000409416 POLR3DP05423 398 aaPredicted RBP15.85■□□□□ 0.13
COL6A2-204ENST00000409416 IGKV5-2P06315 115 aa15.85■□□□□ 0.13
COL6A2-204ENST00000409416 SNRPA1P09661 255 aaKnown RBP15.85■□□□□ 0.13
COL6A2-204ENST00000409416 POLA2Q14181 598 aa15.85■□□□□ 0.13
COL6A2-204ENST00000409416 CCDC57Q2TAC2 916 aa15.85■□□□□ 0.13
COL6A2-204ENST00000409416 HSP90AA4PQ58FG1 418 aa15.85■□□□□ 0.13
COL6A2-204ENST00000409416 DDX21Q9NR30 783 aaKnown RBP eCLIP15.85■□□□□ 0.13
COL6A2-204ENST00000409416 ZHX1Q9UKY1 873 aaPredicted RBP15.85■□□□□ 0.13
COL6A2-204ENST00000409416 UBE2HP62256 183 aa15.85■□□□□ 0.13
COL6A2-204ENST00000409416 FTOQ9C0B1 505 aaKnown RBP eCLIP15.85■□□□□ 0.13
COL6A2-204ENST00000409416 GPHNQ9NQX3 736 aaPredicted RBP15.85■□□□□ 0.13
COL6A2-204ENST00000409416 IFIT1P09914 478 aaKnown RBP15.85■□□□□ 0.13
COL6A2-204ENST00000409416 RNF20Q5VTR2 975 aa15.85■□□□□ 0.13
COL6A2-204ENST00000409416 CYP27B1O15528 508 aa15.84■□□□□ 0.13
COL6A2-204ENST00000409416 APOBRQ0VD83 1088 aa15.84■□□□□ 0.13
COL6A2-204ENST00000409416 ME3Q16798 604 aa15.84■□□□□ 0.13
COL6A2-204ENST00000409416 TTC39AQ5SRH9 613 aa15.84■□□□□ 0.13
COL6A2-204ENST00000409416 VPS53Q5VIR6 699 aa15.84■□□□□ 0.13
COL6A2-204ENST00000409416 AKAP12Q02952 1782 aa15.84■□□□□ 0.13
COL6A2-204ENST00000409416 RPAP1Q9BWH6 1393 aaPredicted RBP15.84■□□□□ 0.13
COL6A2-204ENST00000409416 HS1BP3Q53T59 392 aa15.84■□□□□ 0.13
COL6A2-204ENST00000409416 GCKRQ14397 625 aa15.84■□□□□ 0.13
COL6A2-204ENST00000409416 PRDM10Q9NQV6 1147 aa15.84■□□□□ 0.13
COL6A2-204ENST00000409416 SSH2Q76I76 1423 aa15.83■□□□□ 0.13
COL6A2-204ENST00000409416 BIN1O00499 593 aa15.83■□□□□ 0.13
COL6A2-204ENST00000409416 CDC37L1Q7L3B6 337 aa15.83■□□□□ 0.13
COL6A2-204ENST00000409416 SLC52A2Q9HAB3 445 aa15.83■□□□□ 0.13
COL6A2-204ENST00000409416 CEP126Q9P2H0 1117 aa15.83■□□□□ 0.13
COL6A2-204ENST00000409416 NRKQ7Z2Y5 1582 aa15.83■□□□□ 0.12
COL6A2-204ENST00000409416 AOX1Q06278 1338 aa15.83■□□□□ 0.12
COL6A2-204ENST00000409416 NEURL1BA8MQ27 555 aa15.83■□□□□ 0.12
COL6A2-204ENST00000409416 CPLX1O14810 134 aa15.83■□□□□ 0.12
COL6A2-204ENST00000409416 GJB4Q9NTQ9 266 aa15.83■□□□□ 0.12
COL6A2-204ENST00000409416 ZNF500O60304 480 aaPredicted RBP15.82■□□□□ 0.12
COL6A2-204ENST00000409416 Q6ZUG5 572 aa15.82■□□□□ 0.12
COL6A2-204ENST00000409416 DNAJC10Q8IXB1 793 aa15.82■□□□□ 0.12
COL6A2-204ENST00000409416 ZCRB1Q8TBF4 217 aaKnown RBP15.82■□□□□ 0.12
COL6A2-204ENST00000409416 TTC14Q96N46 770 aa15.82■□□□□ 0.12
COL6A2-204ENST00000409416 TMOD3Q9NYL9 352 aa15.82■□□□□ 0.12
COL6A2-204ENST00000409416 ASAP1Q9ULH1 1129 aa15.82■□□□□ 0.12
COL6A2-204ENST00000409416 TPCN1Q9ULQ1 816 aa15.82■□□□□ 0.12
COL6A2-204ENST00000409416 METTL24Q5JXM2 366 aa15.82■□□□□ 0.12
COL6A2-204ENST00000409416 NFXL1Q6ZNB6 911 aa15.82■□□□□ 0.12
COL6A2-204ENST00000409416 EVI5LQ96CN4 794 aa15.82■□□□□ 0.12
COL6A2-204ENST00000409416 ABCF2Q9UG63 623 aa15.82■□□□□ 0.12
COL6A2-204ENST00000409416 DBNLQ9UJU6 430 aaKnown RBP15.82■□□□□ 0.12
COL6A2-204ENST00000409416 NPHP3Q7Z494 1330 aa15.82■□□□□ 0.12
COL6A2-204ENST00000409416 PHKG2P15735 406 aa15.81■□□□□ 0.12
COL6A2-204ENST00000409416 ERC1Q8IUD2 1116 aa15.81■□□□□ 0.12
COL6A2-204ENST00000409416 SPATA32Q96LK8 384 aa15.81■□□□□ 0.12
COL6A2-204ENST00000409416 CCDC171Q6TFL3 1326 aa15.81■□□□□ 0.12
COL6A2-204ENST00000409416 TCHHQ07283 1943 aa15.81■□□□□ 0.12
COL6A2-204ENST00000409416 PDCL3Q9H2J4 239 aa15.81■□□□□ 0.12
COL6A2-204ENST00000409416 MTMR6Q9Y217 621 aa15.81■□□□□ 0.12
COL6A2-204ENST00000409416 ADCY9O60503 1353 aa15.81■□□□□ 0.12
COL6A2-204ENST00000409416 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
COL6A2-204ENST00000409416 TMEM94Q12767 1356 aa15.8■□□□□ 0.12
COL6A2-204ENST00000409416 TAF5LO75529 589 aa15.8■□□□□ 0.12
COL6A2-204ENST00000409416 ME1P48163 572 aa15.8■□□□□ 0.12
COL6A2-204ENST00000409416 KRT85P78386 507 aa15.8■□□□□ 0.12
COL6A2-204ENST00000409416 BBXQ8WY36 941 aaPredicted RBP15.8■□□□□ 0.12
COL6A2-204ENST00000409416 BTG4Q9NY30 223 aa15.8■□□□□ 0.12
COL6A2-204ENST00000409416 TRMT112Q9UI30 125 aaKnown RBP15.8■□□□□ 0.12
COL6A2-204ENST00000409416 ERBB3P21860 1342 aa15.8■□□□□ 0.12
COL6A2-204ENST00000409416 SLC27A2O14975 620 aa15.8■□□□□ 0.12
COL6A2-204ENST00000409416 ADORA1P30542 326 aa15.8■□□□□ 0.12
COL6A2-204ENST00000409416 SASS6Q6UVJ0 657 aa15.8■□□□□ 0.12
COL6A2-204ENST00000409416 LDHAL6AQ6ZMR3 332 aa15.8■□□□□ 0.12
COL6A2-204ENST00000409416 CHMP4AQ9BY43 222 aa15.8■□□□□ 0.12
COL6A2-204ENST00000409416 TRIM5Q9C035 493 aa15.79■□□□□ 0.12
COL6A2-204ENST00000409416 PTPN21Q16825 1174 aa15.79■□□□□ 0.12
COL6A2-204ENST00000409416 ZSCAN31Q96LW9 406 aaPredicted RBP15.79■□□□□ 0.12
COL6A2-204ENST00000409416 MYL10Q9BUA6 226 aa15.79■□□□□ 0.12
COL6A2-204ENST00000409416 HDAC5Q9UQL6 1122 aa15.79■□□□□ 0.12
COL6A2-204ENST00000409416 RGPD8O14715 1765 aaPredicted RBP15.78■□□□□ 0.12
COL6A2-204ENST00000409416 PSMA5P28066 241 aa15.78■□□□□ 0.12
COL6A2-204ENST00000409416 ZKSCAN3Q9BRR0 538 aa15.78■□□□□ 0.12
COL6A2-204ENST00000409416 CCDC192P0DO97 292 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms