RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CDHR2Q9BYE9 1310 aa22.1■■□□□ 1.13
CHMP3-203ENST00000409225 SHTN1A0MZ66 631 aa22.1■■□□□ 1.13
CHMP3-203ENST00000409225 NOGQ13253 232 aa22.1■■□□□ 1.13
CHMP3-203ENST00000409225 TNIP1Q15025 636 aa22.1■■□□□ 1.13
CHMP3-203ENST00000409225 UTP14AQ9BVJ6 771 aaKnown RBP22.1■■□□□ 1.13
CHMP3-203ENST00000409225 HUNKP57058 714 aa22.09■■□□□ 1.13
CHMP3-203ENST00000409225 KIAA2012Q0VF49 1180 aa22.09■■□□□ 1.13
CHMP3-203ENST00000409225 USP48Q86UV5 1035 aa22.09■■□□□ 1.13
CHMP3-203ENST00000409225 MPNDQ8N594 471 aa22.09■■□□□ 1.13
CHMP3-203ENST00000409225 CNOT7Q9UIV1 285 aaKnown RBP22.09■■□□□ 1.13
CHMP3-203ENST00000409225 SLC10A5Q5PT55 438 aa22.08■■□□□ 1.13
CHMP3-203ENST00000409225 DLK2Q6UY11 383 aa22.08■■□□□ 1.13
CHMP3-203ENST00000409225 SP8Q8IXZ3 490 aa22.08■■□□□ 1.13
CHMP3-203ENST00000409225 THUMPD2Q9BTF0 503 aaKnown RBP22.08■■□□□ 1.13
CHMP3-203ENST00000409225 BBOX1O75936 387 aa22.07■■□□□ 1.12
CHMP3-203ENST00000409225 DLG5Q8TDM6 1919 aa22.06■■□□□ 1.12
CHMP3-203ENST00000409225 H7C1D1 291 aa22.06■■□□□ 1.12
CHMP3-203ENST00000409225 NEFMP07197 916 aa22.06■■□□□ 1.12
CHMP3-203ENST00000409225 MICALL2Q8IY33 904 aa22.06■■□□□ 1.12
CHMP3-203ENST00000409225 YDJCA8MPS7 323 aa22.05■■□□□ 1.12
CHMP3-203ENST00000409225 HCLS1P14317 486 aaPredicted RBP22.05■■□□□ 1.12
CHMP3-203ENST00000409225 ERBB4Q15303 1308 aa22.05■■□□□ 1.12
CHMP3-203ENST00000409225 ZBTB12Q9Y330 459 aaPredicted RBP22.04■■□□□ 1.12
CHMP3-203ENST00000409225 TNRC18O15417 2968 aaPredicted RBP22.04■■□□□ 1.12
CHMP3-203ENST00000409225 LAMB2P55268 1798 aa22.03■■□□□ 1.12
CHMP3-203ENST00000409225 EIF2S2P20042 333 aaKnown RBP22.03■■□□□ 1.12
CHMP3-203ENST00000409225 SOX10P56693 466 aa22.03■■□□□ 1.12
CHMP3-203ENST00000409225 DDX46Q7L014 1031 aaKnown RBP22.03■■□□□ 1.12
CHMP3-203ENST00000409225 ANXA1P04083 346 aa22.02■■□□□ 1.12
CHMP3-203ENST00000409225 GRAPQ13588 217 aa22.02■■□□□ 1.12
CHMP3-203ENST00000409225 RGMBQ6NW40 437 aa22.02■■□□□ 1.12
CHMP3-203ENST00000409225 SAMD7Q7Z3H4 446 aa22.02■■□□□ 1.12
CHMP3-203ENST00000409225 LRP10Q7Z4F1 713 aa22.02■■□□□ 1.12
CHMP3-203ENST00000409225 GRAPLQ8TC17 118 aaPredicted RBP22.02■■□□□ 1.12
CHMP3-203ENST00000409225 FAM155AB1AL88 458 aaPredicted RBP22.01■■□□□ 1.11
CHMP3-203ENST00000409225 PDIA6Q15084 440 aa22.01■■□□□ 1.11
CHMP3-203ENST00000409225 NFE2L2Q16236 605 aa22.01■■□□□ 1.11
CHMP3-203ENST00000409225 PROSER3Q2NL68 480 aa22.01■■□□□ 1.11
CHMP3-203ENST00000409225 TBC1D10BQ4KMP7 808 aaPredicted RBP22.01■■□□□ 1.11
CHMP3-203ENST00000409225 KRT26Q7Z3Y9 468 aa22.01■■□□□ 1.11
CHMP3-203ENST00000409225 GBA2Q9HCG7 927 aaPredicted RBP22.01■■□□□ 1.11
CHMP3-203ENST00000409225 PDE4DIPQ5VU43 2346 aa22.01■■□□□ 1.11
CHMP3-203ENST00000409225 PSMD14O00487 310 aa22■■□□□ 1.11
CHMP3-203ENST00000409225 KIF23Q02241 960 aaPredicted RBP22■■□□□ 1.11
CHMP3-203ENST00000409225 C2orf69Q8N8R5 385 aa22■■□□□ 1.11
CHMP3-203ENST00000409225 SAGE1Q9NXZ1 904 aa22■■□□□ 1.11
CHMP3-203ENST00000409225 DUOX1Q9NRD9 1551 aa21.99■■□□□ 1.11
CHMP3-203ENST00000409225 ANKRD36CQ5JPF3 1778 aa21.99■■□□□ 1.11
CHMP3-203ENST00000409225 ADM5C9JUS6 153 aa21.99■■□□□ 1.11
CHMP3-203ENST00000409225 NLRP10Q86W26 655 aa21.99■■□□□ 1.11
CHMP3-203ENST00000409225 DPF2Q92785 391 aa21.99■■□□□ 1.11
CHMP3-203ENST00000409225 TRMT112Q9UI30 125 aaKnown RBP21.99■■□□□ 1.11
CHMP3-203ENST00000409225 TSPYL4Q9UJ04 414 aa21.99■■□□□ 1.11
CHMP3-203ENST00000409225 TRPA1O75762 1119 aa21.98■■□□□ 1.11
CHMP3-203ENST00000409225 EGFRP00533 1210 aa21.98■■□□□ 1.11
CHMP3-203ENST00000409225 ZNF157P51786 506 aaPredicted RBP21.98■■□□□ 1.11
CHMP3-203ENST00000409225 RBM26Q5T8P6 1007 aaKnown RBP21.98■■□□□ 1.11
CHMP3-203ENST00000409225 CCDC102AQ96A19 550 aa21.98■■□□□ 1.11
CHMP3-203ENST00000409225 ZNF428Q96B54 188 aa21.98■■□□□ 1.11
CHMP3-203ENST00000409225 PLEKHF1Q96S99 279 aa21.98■■□□□ 1.11
CHMP3-203ENST00000409225 DBNDD1Q9H9R9 158 aa21.98■■□□□ 1.11
CHMP3-203ENST00000409225 RNF186Q9NXI6 227 aa21.98■■□□□ 1.11
CHMP3-203ENST00000409225 TAF1P21675 1872 aa21.98■■□□□ 1.11
CHMP3-203ENST00000409225 AIMP1Q12904 312 aaKnown RBP21.97■■□□□ 1.11
CHMP3-203ENST00000409225 HSP90AB3PQ58FF7 597 aa21.97■■□□□ 1.11
CHMP3-203ENST00000409225 DCPSQ96C86 337 aaKnown RBP21.97■■□□□ 1.11
CHMP3-203ENST00000409225 RIMBP2O15034 1052 aa21.96■■□□□ 1.11
CHMP3-203ENST00000409225 WASHC4Q2M389 1173 aa21.96■■□□□ 1.11
CHMP3-203ENST00000409225 COPS6Q7L5N1 327 aa21.96■■□□□ 1.11
CHMP3-203ENST00000409225 NECTIN2Q92692 538 aa21.96■■□□□ 1.11
CHMP3-203ENST00000409225 SH3TC1Q8TE82 1336 aa21.96■■□□□ 1.11
CHMP3-203ENST00000409225 TMC4Q7Z404 712 aa21.95■■□□□ 1.1
CHMP3-203ENST00000409225 XAGE3Q8WTP9 111 aa21.95■■□□□ 1.1
CHMP3-203ENST00000409225 NSFL1CQ9UNZ2 370 aaKnown RBP21.94■■□□□ 1.1
CHMP3-203ENST00000409225 POLR2AP24928 1970 aaKnown RBP21.94■■□□□ 1.1
CHMP3-203ENST00000409225 LRRC37AA6NMS7 1700 aa21.93■■□□□ 1.1
CHMP3-203ENST00000409225 C6orf229H3BNL8 230 aa21.93■■□□□ 1.1
CHMP3-203ENST00000409225 SLC10A3P09131 477 aa21.93■■□□□ 1.1
CHMP3-203ENST00000409225 RPS12P25398 132 aaKnown RBP21.93■■□□□ 1.1
CHMP3-203ENST00000409225 TCIRG1Q13488 830 aa21.93■■□□□ 1.1
CHMP3-203ENST00000409225 KCNQ5Q9NR82 932 aa21.93■■□□□ 1.1
CHMP3-203ENST00000409225 MAPK8IP3Q9UPT6 1336 aa21.93■■□□□ 1.1
CHMP3-203ENST00000409225 ECE2O60344 883 aa21.92■■□□□ 1.1
CHMP3-203ENST00000409225 DOK7Q18PE1 504 aa21.92■■□□□ 1.1
CHMP3-203ENST00000409225 CTU1Q7Z7A3 348 aaKnown RBP21.92■■□□□ 1.1
CHMP3-203ENST00000409225 CSRNP1Q96S65 589 aa21.92■■□□□ 1.1
CHMP3-203ENST00000409225 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
CHMP3-203ENST00000409225 AKAP11Q9UKA4 1901 aa21.91■■□□□ 1.1
CHMP3-203ENST00000409225 KIF4BQ2VIQ3 1234 aa21.91■■□□□ 1.1
CHMP3-203ENST00000409225 CELF1Q92879 486 aaKnown RBP21.91■■□□□ 1.1
CHMP3-203ENST00000409225 GGA3Q9NZ52 723 aa21.91■■□□□ 1.1
CHMP3-203ENST00000409225 POLLQ9UGP5 575 aa21.91■■□□□ 1.1
CHMP3-203ENST00000409225 GPSM2P81274 684 aa21.9■■□□□ 1.1
CHMP3-203ENST00000409225 SULF1Q8IWU6 871 aa21.9■■□□□ 1.1
CHMP3-203ENST00000409225 ASTN2O75129 1339 aaPredicted RBP21.89■■□□□ 1.1
CHMP3-203ENST00000409225 PRPF38BQ5VTL8 546 aaKnown RBP21.89■■□□□ 1.09
CHMP3-203ENST00000409225 CDCA5Q96FF9 252 aa21.89■■□□□ 1.09
CHMP3-203ENST00000409225 EYA3Q99504 573 aa21.89■■□□□ 1.09
CHMP3-203ENST00000409225 PNNQ9H307 717 aaKnown RBP21.88■■□□□ 1.09
CHMP3-203ENST00000409225 DDX60Q8IY21 1712 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms