RNA–Protein interactions for RNA: ENST00000408968.3

IFITM1-202, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFITM1, Length 855 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-202ENST00000408968 VPS33BQ9H267 617 aa16.99■□□□□ 0.31
IFITM1-202ENST00000408968 ATP6V0A2Q9Y487 856 aa16.99■□□□□ 0.31
IFITM1-202ENST00000408968 C3orf67Q6ZVT6 689 aa16.98■□□□□ 0.31
IFITM1-202ENST00000408968 C16orf71Q8IYS4 520 aaPredicted RBP16.98■□□□□ 0.31
IFITM1-202ENST00000408968 DNAAF4Q8WXU2 420 aa16.98■□□□□ 0.31
IFITM1-202ENST00000408968 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
IFITM1-202ENST00000408968 TAF1P21675 1872 aa16.98■□□□□ 0.31
IFITM1-202ENST00000408968 PDE8AO60658 829 aa16.97■□□□□ 0.31
IFITM1-202ENST00000408968 CT47B1P0C2W7 299 aaPredicted RBP16.97■□□□□ 0.31
IFITM1-202ENST00000408968 IARSP41252 1262 aaKnown RBP16.97■□□□□ 0.31
IFITM1-202ENST00000408968 CCDC152Q4G0S7 254 aa16.97■□□□□ 0.31
IFITM1-202ENST00000408968 KIF3CO14782 793 aa16.96■□□□□ 0.31
IFITM1-202ENST00000408968 SP8Q8IXZ3 490 aa16.96■□□□□ 0.31
IFITM1-202ENST00000408968 LINS1Q8NG48 757 aa16.96■□□□□ 0.31
IFITM1-202ENST00000408968 JDP2Q8WYK2 163 aa16.96■□□□□ 0.31
IFITM1-202ENST00000408968 LTBP1Q14766 1721 aa16.96■□□□□ 0.3
IFITM1-202ENST00000408968 NEURL1BA8MQ27 555 aa16.95■□□□□ 0.3
IFITM1-202ENST00000408968 TCERG1O14776 1098 aaKnown RBP16.95■□□□□ 0.3
IFITM1-202ENST00000408968 TOMM70O94826 608 aa16.95■□□□□ 0.3
IFITM1-202ENST00000408968 KCNA4P22459 653 aa16.95■□□□□ 0.3
IFITM1-202ENST00000408968 PRELPP51888 382 aa16.95■□□□□ 0.3
IFITM1-202ENST00000408968 SLFN5Q08AF3 891 aa16.95■□□□□ 0.3
IFITM1-202ENST00000408968 SPEF2Q9C093 1822 aa16.95■□□□□ 0.3
IFITM1-202ENST00000408968 RTL9Q8NET4 1388 aa16.94■□□□□ 0.3
IFITM1-202ENST00000408968 IGKV5-2P06315 115 aa16.94■□□□□ 0.3
IFITM1-202ENST00000408968 G2E3Q7L622 706 aa16.94■□□□□ 0.3
IFITM1-202ENST00000408968 SYNE4Q8N205 404 aa16.94■□□□□ 0.3
IFITM1-202ENST00000408968 ZNF277Q9NRM2 450 aaPredicted RBP16.94■□□□□ 0.3
IFITM1-202ENST00000408968 PTPRCP08575 1304 aa16.94■□□□□ 0.3
IFITM1-202ENST00000408968 IQCA1LA6NCM1 817 aa16.93■□□□□ 0.3
IFITM1-202ENST00000408968 VEGFAP15692 232 aaPredicted RBP16.93■□□□□ 0.3
IFITM1-202ENST00000408968 DPP8Q6V1X1 898 aaPredicted RBP16.93■□□□□ 0.3
IFITM1-202ENST00000408968 RBM46Q8TBY0 533 aaKnown RBP16.93■□□□□ 0.3
IFITM1-202ENST00000408968 RTFDC1Q9BY42 306 aaPredicted RBP16.93■□□□□ 0.3
IFITM1-202ENST00000408968 NMRK2Q9NPI5 230 aa16.93■□□□□ 0.3
IFITM1-202ENST00000408968 CTSWP56202 376 aa16.92■□□□□ 0.3
IFITM1-202ENST00000408968 GCKRQ14397 625 aa16.92■□□□□ 0.3
IFITM1-202ENST00000408968 ALDH1L2Q3SY69 923 aa16.92■□□□□ 0.3
IFITM1-202ENST00000408968 RTL5Q5HYW3 569 aaPredicted RBP16.92■□□□□ 0.3
IFITM1-202ENST00000408968 MPNDQ8N594 471 aa16.92■□□□□ 0.3
IFITM1-202ENST00000408968 CDC5LQ99459 802 aaKnown RBP16.92■□□□□ 0.3
IFITM1-202ENST00000408968 DUOX1Q9NRD9 1551 aa16.92■□□□□ 0.3
IFITM1-202ENST00000408968 EIF6P56537 245 aaKnown RBP16.91■□□□□ 0.3
IFITM1-202ENST00000408968 CWF19L2Q2TBE0 894 aaKnown RBP16.91■□□□□ 0.3
IFITM1-202ENST00000408968 OLFM4Q6UX06 510 aa16.91■□□□□ 0.3
IFITM1-202ENST00000408968 NIM1KQ8IY84 436 aa16.91■□□□□ 0.3
IFITM1-202ENST00000408968 LARGE2Q8N3Y3 721 aa16.91■□□□□ 0.3
IFITM1-202ENST00000408968 L3MBTL3Q96JM7 780 aaPredicted RBP16.91■□□□□ 0.3
IFITM1-202ENST00000408968 FZD9O00144 591 aa16.9■□□□□ 0.3
IFITM1-202ENST00000408968 PPIP5K2O43314 1243 aa16.9■□□□□ 0.3
IFITM1-202ENST00000408968 RPS8P62241 208 aaKnown RBP16.9■□□□□ 0.3
IFITM1-202ENST00000408968 FSTL1Q12841 308 aa16.9■□□□□ 0.3
IFITM1-202ENST00000408968 UBE3BQ7Z3V4 1068 aa16.9■□□□□ 0.3
IFITM1-202ENST00000408968 PLA2G12BQ9BX93 195 aa16.9■□□□□ 0.3
IFITM1-202ENST00000408968 H7C1W4 665 aa16.89■□□□□ 0.29
IFITM1-202ENST00000408968 ALDH1L1O75891 902 aa16.89■□□□□ 0.29
IFITM1-202ENST00000408968 ANKRD18AQ8IVF6 992 aa16.89■□□□□ 0.29
IFITM1-202ENST00000408968 TRMT2AQ8IZ69 625 aaKnown RBP16.89■□□□□ 0.29
IFITM1-202ENST00000408968 GPC2Q8N158 579 aa16.89■□□□□ 0.29
IFITM1-202ENST00000408968 EYA3Q99504 573 aa16.89■□□□□ 0.29
IFITM1-202ENST00000408968 RRAGCQ9HB90 399 aa16.89■□□□□ 0.29
IFITM1-202ENST00000408968 KIAA2012Q0VF49 1180 aa16.88■□□□□ 0.29
IFITM1-202ENST00000408968 MIER1Q8N108 512 aa16.88■□□□□ 0.29
IFITM1-202ENST00000408968 SMC1BQ8NDV3 1235 aa16.88■□□□□ 0.29
IFITM1-202ENST00000408968 CELF1Q92879 486 aaKnown RBP16.88■□□□□ 0.29
IFITM1-202ENST00000408968 PSME4Q14997 1843 aa16.87■□□□□ 0.29
IFITM1-202ENST00000408968 BEND3Q5T5X7 828 aa16.87■□□□□ 0.29
IFITM1-202ENST00000408968 SRCIN1Q9C0H9 1055 aa16.87■□□□□ 0.29
IFITM1-202ENST00000408968 COL4A5P29400 1685 aa16.87■□□□□ 0.29
IFITM1-202ENST00000408968 COL4A1P02462 1669 aa16.86■□□□□ 0.29
IFITM1-202ENST00000408968 AOC3Q16853 763 aa16.86■□□□□ 0.29
IFITM1-202ENST00000408968 MRPL50Q8N5N7 158 aaKnown RBP16.86■□□□□ 0.29
IFITM1-202ENST00000408968 TTLL11Q8NHH1 800 aa16.86■□□□□ 0.29
IFITM1-202ENST00000408968 SMC4Q9NTJ3 1288 aa16.86■□□□□ 0.29
IFITM1-202ENST00000408968 PODXL2Q9NZ53 605 aa16.86■□□□□ 0.29
IFITM1-202ENST00000408968 KIF16BQ96L93 1317 aa16.86■□□□□ 0.29
IFITM1-202ENST00000408968 ZNF541Q9H0D2 1346 aa16.86■□□□□ 0.29
IFITM1-202ENST00000408968 A0A1B0GUL6 1792 aa16.86■□□□□ 0.29
IFITM1-202ENST00000408968 F6X3S4 739 aa16.85■□□□□ 0.29
IFITM1-202ENST00000408968 GRM8O00222 908 aa16.85■□□□□ 0.29
IFITM1-202ENST00000408968 DDNO94850 711 aaPredicted RBP16.85■□□□□ 0.29
IFITM1-202ENST00000408968 HSPA6P17066 643 aa16.85■□□□□ 0.29
IFITM1-202ENST00000408968 NSFL1CQ9UNZ2 370 aaKnown RBP16.85■□□□□ 0.29
IFITM1-202ENST00000408968 XDHP47989 1333 aa16.85■□□□□ 0.29
IFITM1-202ENST00000408968 ADAMTSL1Q8N6G6 1762 aa16.84■□□□□ 0.29
IFITM1-202ENST00000408968 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
IFITM1-202ENST00000408968 IGHMBP2P38935 993 aaKnown RBP16.84■□□□□ 0.29
IFITM1-202ENST00000408968 CASP7P55210 303 aa16.84■□□□□ 0.29
IFITM1-202ENST00000408968 SLC4A10Q6U841 1118 aa16.84■□□□□ 0.29
IFITM1-202ENST00000408968 SSH1Q8WYL5 1049 aa16.84■□□□□ 0.29
IFITM1-202ENST00000408968 CDCA7LQ96GN5 454 aa16.84■□□□□ 0.29
IFITM1-202ENST00000408968 SEC31BQ9NQW1 1179 aa16.84■□□□□ 0.29
IFITM1-202ENST00000408968 C9orf78Q9NZ63 289 aaPredicted RBP16.84■□□□□ 0.29
IFITM1-202ENST00000408968 ANKIB1Q9P2G1 1089 aa16.84■□□□□ 0.29
IFITM1-202ENST00000408968 HACL1Q9UJ83 578 aa16.84■□□□□ 0.29
IFITM1-202ENST00000408968 ZNRF3Q9ULT6 936 aa16.84■□□□□ 0.29
IFITM1-202ENST00000408968 BRPF1P55201 1214 aaPredicted RBP16.83■□□□□ 0.28
IFITM1-202ENST00000408968 WASHC4Q2M389 1173 aa16.83■□□□□ 0.28
IFITM1-202ENST00000408968 PNMA8AQ86V59 439 aaPredicted RBP16.83■□□□□ 0.28
IFITM1-202ENST00000408968 BSDC1Q9NW68 430 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms