RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 SETDB2Q96T68 719 aa10.93□□□□□ -0.66
PTPN12-202ENST00000407343 CNTN3Q9P232 1028 aa10.93□□□□□ -0.66
PTPN12-202ENST00000407343 PHF24Q9UPV7 400 aa10.93□□□□□ -0.66
PTPN12-202ENST00000407343 PLCB3Q01970 1234 aa10.92□□□□□ -0.66
PTPN12-202ENST00000407343 ENOX2Q16206 610 aaKnown RBP10.92□□□□□ -0.66
PTPN12-202ENST00000407343 RAB44Q7Z6P3 723 aaPredicted RBP10.92□□□□□ -0.66
PTPN12-202ENST00000407343 TRERF1Q96PN7 1200 aa10.92□□□□□ -0.66
PTPN12-202ENST00000407343 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.92□□□□□ -0.66
PTPN12-202ENST00000407343 RNFT1Q5M7Z0 435 aa10.91□□□□□ -0.66
PTPN12-202ENST00000407343 MMP20O60882 483 aa10.9□□□□□ -0.66
PTPN12-202ENST00000407343 ZNF16P17020 682 aaPredicted RBP10.9□□□□□ -0.66
PTPN12-202ENST00000407343 NFKB1P19838 968 aa10.9□□□□□ -0.66
PTPN12-202ENST00000407343 KRT76Q01546 638 aa10.9□□□□□ -0.66
PTPN12-202ENST00000407343 NFX1Q12986 1120 aaKnown RBP10.9□□□□□ -0.66
PTPN12-202ENST00000407343 USPL1Q5W0Q7 1092 aa10.9□□□□□ -0.66
PTPN12-202ENST00000407343 FOXR1Q6PIV2 292 aa10.9□□□□□ -0.66
PTPN12-202ENST00000407343 KRT25Q7Z3Z0 450 aa10.9□□□□□ -0.66
PTPN12-202ENST00000407343 C1orf127Q8N9H9 656 aa10.9□□□□□ -0.66
PTPN12-202ENST00000407343 SNX29Q8TEQ0 813 aa10.9□□□□□ -0.66
PTPN12-202ENST00000407343 CSRNP1Q96S65 589 aa10.9□□□□□ -0.66
PTPN12-202ENST00000407343 BCL2L13Q9BXK5 485 aa10.9□□□□□ -0.66
PTPN12-202ENST00000407343 ABI2Q9NYB9 513 aaPredicted RBP10.9□□□□□ -0.66
PTPN12-202ENST00000407343 KLF15Q9UIH9 416 aa10.9□□□□□ -0.66
PTPN12-202ENST00000407343 WWC3Q9ULE0 1092 aa10.9□□□□□ -0.66
PTPN12-202ENST00000407343 UNCXA6NJT0 531 aa10.89□□□□□ -0.67
PTPN12-202ENST00000407343 EIF1AYO14602 144 aaKnown RBP10.89□□□□□ -0.67
PTPN12-202ENST00000407343 MAP3K6O95382 1288 aa10.89□□□□□ -0.67
PTPN12-202ENST00000407343 CYP2E1P05181 493 aaPredicted RBP10.89□□□□□ -0.67
PTPN12-202ENST00000407343 EFCC1Q9HA90 598 aa10.89□□□□□ -0.67
PTPN12-202ENST00000407343 ZFYVE28Q9HCC9 887 aa10.89□□□□□ -0.67
PTPN12-202ENST00000407343 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.89□□□□□ -0.67
PTPN12-202ENST00000407343 MAPK8P45983 427 aa10.88□□□□□ -0.67
PTPN12-202ENST00000407343 EAPPQ56P03 285 aaPredicted RBP10.88□□□□□ -0.67
PTPN12-202ENST00000407343 OR13H1Q8NG92 308 aa10.88□□□□□ -0.67
PTPN12-202ENST00000407343 GIPC2Q8TF65 315 aa10.88□□□□□ -0.67
PTPN12-202ENST00000407343 MDFIQ99750 246 aa10.88□□□□□ -0.67
PTPN12-202ENST00000407343 RNF19AQ9NV58 838 aa10.88□□□□□ -0.67
PTPN12-202ENST00000407343 PNMA6FA0A0J9YX94 578 aa10.87□□□□□ -0.67
PTPN12-202ENST00000407343 HOXD8P13378 290 aaPredicted RBP10.87□□□□□ -0.67
PTPN12-202ENST00000407343 ZNF468Q5VIY5 522 aaPredicted RBP10.87□□□□□ -0.67
PTPN12-202ENST00000407343 BHMTQ93088 406 aa10.87□□□□□ -0.67
PTPN12-202ENST00000407343 DNAJC25Q9H1X3 360 aa10.87□□□□□ -0.67
PTPN12-202ENST00000407343 EREGO14944 169 aa10.86□□□□□ -0.67
PTPN12-202ENST00000407343 RARAP10276 462 aa10.86□□□□□ -0.67
PTPN12-202ENST00000407343 TTC16Q8NEE8 873 aa10.86□□□□□ -0.67
PTPN12-202ENST00000407343 COL25A1Q9BXS0 654 aaPredicted RBP10.86□□□□□ -0.67
PTPN12-202ENST00000407343 MBIPQ9NS73 344 aa10.86□□□□□ -0.67
PTPN12-202ENST00000407343 TLR7Q9NYK1 1049 aaKnown RBP10.86□□□□□ -0.67
PTPN12-202ENST00000407343 CPNE3O75131 537 aaKnown RBP10.85□□□□□ -0.67
PTPN12-202ENST00000407343 PHACTR2O75167 634 aa10.85□□□□□ -0.67
PTPN12-202ENST00000407343 LDHBP07195 334 aaKnown RBP10.85□□□□□ -0.67
PTPN12-202ENST00000407343 MX2P20592 715 aa10.85□□□□□ -0.67
PTPN12-202ENST00000407343 SOX18P35713 384 aa10.85□□□□□ -0.67
PTPN12-202ENST00000407343 COL13A1Q5TAT6 717 aaPredicted RBP10.85□□□□□ -0.67
PTPN12-202ENST00000407343 ZBTB42B2RXF5 422 aa10.84□□□□□ -0.67
PTPN12-202ENST00000407343 BMP4P12644 408 aa10.84□□□□□ -0.67
PTPN12-202ENST00000407343 SYT9Q86SS6 491 aa10.84□□□□□ -0.67
PTPN12-202ENST00000407343 AVENQ9NQS1 362 aaPredicted RBP10.84□□□□□ -0.67
PTPN12-202ENST00000407343 PRPF40AO75400 957 aaKnown RBP10.83□□□□□ -0.68
PTPN12-202ENST00000407343 DHX32Q7L7V1 743 aaKnown RBP10.83□□□□□ -0.68
PTPN12-202ENST00000407343 SIN3BO75182 1162 aa10.82□□□□□ -0.68
PTPN12-202ENST00000407343 KIF4AO95239 1232 aa10.82□□□□□ -0.68
PTPN12-202ENST00000407343 NEFLP07196 543 aa10.82□□□□□ -0.68
PTPN12-202ENST00000407343 PCBP4P57723 403 aaKnown RBP10.82□□□□□ -0.68
PTPN12-202ENST00000407343 LCE2AQ5TA79 106 aaPredicted RBP10.82□□□□□ -0.68
PTPN12-202ENST00000407343 PNMA5Q96PV4 448 aa10.82□□□□□ -0.68
PTPN12-202ENST00000407343 KIAA1522Q9P206 1035 aaPredicted RBP10.82□□□□□ -0.68
PTPN12-202ENST00000407343 KANSL3Q9P2N6 904 aa10.82□□□□□ -0.68
PTPN12-202ENST00000407343 SALL4Q9UJQ4 1053 aa10.82□□□□□ -0.68
PTPN12-202ENST00000407343 IGF1RP08069 1367 aa10.81□□□□□ -0.68
PTPN12-202ENST00000407343 POLR3DP05423 398 aaPredicted RBP10.81□□□□□ -0.68
PTPN12-202ENST00000407343 ARAFP10398 606 aa10.81□□□□□ -0.68
PTPN12-202ENST00000407343 IRS1P35568 1242 aa10.81□□□□□ -0.68
PTPN12-202ENST00000407343 TTC39BQ5VTQ0 682 aaPredicted RBP10.81□□□□□ -0.68
PTPN12-202ENST00000407343 PI16Q6UXB8 463 aa10.81□□□□□ -0.68
PTPN12-202ENST00000407343 FCHSD1Q86WN1 690 aa10.81□□□□□ -0.68
PTPN12-202ENST00000407343 GALNT12Q8IXK2 581 aa10.81□□□□□ -0.68
PTPN12-202ENST00000407343 TRPM4Q8TD43 1214 aa10.81□□□□□ -0.68
PTPN12-202ENST00000407343 TNFRSF25Q93038 417 aa10.81□□□□□ -0.68
PTPN12-202ENST00000407343 CCDC74AQ96AQ1 378 aa10.81□□□□□ -0.68
PTPN12-202ENST00000407343 NRLP54845 237 aa10.8□□□□□ -0.68
PTPN12-202ENST00000407343 PEAR1Q5VY43 1037 aaPredicted RBP10.8□□□□□ -0.68
PTPN12-202ENST00000407343 FBF1Q8TES7 1133 aa10.8□□□□□ -0.68
PTPN12-202ENST00000407343 SLC16A10Q8TF71 515 aa10.8□□□□□ -0.68
PTPN12-202ENST00000407343 IRF7Q92985 503 aa10.8□□□□□ -0.68
PTPN12-202ENST00000407343 DUSP9Q99956 384 aaKnown RBP10.8□□□□□ -0.68
PTPN12-202ENST00000407343 PRR12Q9ULL5 1215 aa10.8□□□□□ -0.68
PTPN12-202ENST00000407343 CES1P23141 567 aa10.79□□□□□ -0.68
PTPN12-202ENST00000407343 MAP2K3P46734 347 aa10.79□□□□□ -0.68
PTPN12-202ENST00000407343 GPLD1P80108 840 aa10.79□□□□□ -0.68
PTPN12-202ENST00000407343 ALG1LQ6GMV1 187 aa10.79□□□□□ -0.68
PTPN12-202ENST00000407343 EPS8L3Q8TE67 593 aaKnown RBP10.79□□□□□ -0.68
PTPN12-202ENST00000407343 ZNF775Q96BV0 537 aaPredicted RBP10.79□□□□□ -0.68
PTPN12-202ENST00000407343 LATS2Q9NRM7 1088 aa10.79□□□□□ -0.68
PTPN12-202ENST00000407343 ADARB2-AS1A8MUL3 147 aa10.78□□□□□ -0.68
PTPN12-202ENST00000407343 PSAPP07602 524 aa10.78□□□□□ -0.68
PTPN12-202ENST00000407343 RBM25P49756 843 aaKnown RBP10.78□□□□□ -0.68
PTPN12-202ENST00000407343 PLAURQ03405 335 aa10.78□□□□□ -0.68
PTPN12-202ENST00000407343 PMEPA1Q969W9 287 aa10.78□□□□□ -0.68
PTPN12-202ENST00000407343 CNTNAP3BQ96NU0 1288 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms