RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 BRPF1P55201 1214 aaPredicted RBP8.24□□□□□ -1.09
RPA3-204ENST00000406109 CXCL9Q07325 125 aa8.24□□□□□ -1.09
RPA3-204ENST00000406109 TTLL7Q6ZT98 887 aa8.24□□□□□ -1.09
RPA3-204ENST00000406109 PAXIP1Q6ZW49 1069 aaPredicted RBP8.24□□□□□ -1.09
RPA3-204ENST00000406109 HHIPL1Q96JK4 782 aa8.24□□□□□ -1.09
RPA3-204ENST00000406109 ADARB2Q9NS39 739 aaKnown RBP8.24□□□□□ -1.09
RPA3-204ENST00000406109 MIS18AQ9NYP9 233 aa8.24□□□□□ -1.09
RPA3-204ENST00000406109 CA12O43570 354 aa8.23□□□□□ -1.09
RPA3-204ENST00000406109 AOC3Q16853 763 aa8.23□□□□□ -1.09
RPA3-204ENST00000406109 GRIPAP1Q4V328 841 aa8.23□□□□□ -1.09
RPA3-204ENST00000406109 SUSD4Q5VX71 490 aa8.23□□□□□ -1.09
RPA3-204ENST00000406109 CIAPIN1Q6FI81 312 aa8.23□□□□□ -1.09
RPA3-204ENST00000406109 DLK2Q6UY11 383 aa8.23□□□□□ -1.09
RPA3-204ENST00000406109 ZNF34Q8IZ26 560 aa8.23□□□□□ -1.09
RPA3-204ENST00000406109 DCBLD2Q96PD2 775 aa8.23□□□□□ -1.09
RPA3-204ENST00000406109 CRAMP1Q96RY5 1269 aa8.23□□□□□ -1.09
RPA3-204ENST00000406109 RTFDC1Q9BY42 306 aaPredicted RBP8.23□□□□□ -1.09
RPA3-204ENST00000406109 GLIS2Q9BZE0 524 aaPredicted RBP8.23□□□□□ -1.09
RPA3-204ENST00000406109 NYXQ9GZU5 481 aa8.23□□□□□ -1.09
RPA3-204ENST00000406109 MAP3K15Q6ZN16 1313 aa8.23□□□□□ -1.09
RPA3-204ENST00000406109 IBTKQ9P2D0 1353 aaPredicted RBP8.22□□□□□ -1.09
RPA3-204ENST00000406109 CEP290O15078 2479 aa8.22□□□□□ -1.09
RPA3-204ENST00000406109 SHTN1A0MZ66 631 aa8.22□□□□□ -1.09
RPA3-204ENST00000406109 TCERG1O14776 1098 aaKnown RBP8.22□□□□□ -1.09
RPA3-204ENST00000406109 PPEF1O14829 653 aaPredicted RBP8.22□□□□□ -1.09
RPA3-204ENST00000406109 PPIP5K2O43314 1243 aa8.22□□□□□ -1.09
RPA3-204ENST00000406109 NTSR2O95665 410 aa8.22□□□□□ -1.09
RPA3-204ENST00000406109 GPTP24298 496 aa8.22□□□□□ -1.09
RPA3-204ENST00000406109 GTF2E1P29083 439 aaPredicted RBP8.22□□□□□ -1.09
RPA3-204ENST00000406109 GMPSP49915 693 aaPredicted RBP8.22□□□□□ -1.09
RPA3-204ENST00000406109 TAF7Q15545 349 aaPredicted RBP8.22□□□□□ -1.09
RPA3-204ENST00000406109 NGEFQ8N5V2 710 aa8.22□□□□□ -1.09
RPA3-204ENST00000406109 TRPM4Q8TD43 1214 aa8.22□□□□□ -1.09
RPA3-204ENST00000406109 RPGRQ92834 1020 aaKnown RBP8.22□□□□□ -1.09
RPA3-204ENST00000406109 LAMB4A4D0S4 1761 aa8.22□□□□□ -1.09
RPA3-204ENST00000406109 FAM155AB1AL88 458 aaPredicted RBP8.21□□□□□ -1.1
RPA3-204ENST00000406109 HTATSF1O43719 755 aaKnown RBP8.21□□□□□ -1.1
RPA3-204ENST00000406109 PPP2R1AP30153 589 aa8.21□□□□□ -1.1
RPA3-204ENST00000406109 DGKZQ13574 1117 aa8.21□□□□□ -1.1
RPA3-204ENST00000406109 LRP10Q7Z4F1 713 aa8.21□□□□□ -1.1
RPA3-204ENST00000406109 NIM1KQ8IY84 436 aa8.21□□□□□ -1.1
RPA3-204ENST00000406109 ZC3H15Q8WU90 426 aaKnown RBP8.21□□□□□ -1.1
RPA3-204ENST00000406109 RTF1Q92541 710 aaKnown RBP8.21□□□□□ -1.1
RPA3-204ENST00000406109 RBM17Q96I25 401 aaKnown RBP8.21□□□□□ -1.1
RPA3-204ENST00000406109 VPS33BQ9H267 617 aa8.21□□□□□ -1.1
RPA3-204ENST00000406109 ZNRF3Q9ULT6 936 aa8.21□□□□□ -1.1
RPA3-204ENST00000406109 ATP6V0A2Q9Y487 856 aa8.21□□□□□ -1.1
RPA3-204ENST00000406109 TAF1P21675 1872 aa8.21□□□□□ -1.1
RPA3-204ENST00000406109 KDM3BQ7LBC6 1761 aa8.2□□□□□ -1.1
RPA3-204ENST00000406109 YDJCA8MPS7 323 aa8.2□□□□□ -1.1
RPA3-204ENST00000406109 EIF4A1P60842 406 aaKnown RBP8.2□□□□□ -1.1
RPA3-204ENST00000406109 SLC10A5Q5PT55 438 aa8.2□□□□□ -1.1
RPA3-204ENST00000406109 CFAP53Q96M91 514 aa8.2□□□□□ -1.1
RPA3-204ENST00000406109 ZBTB3Q9H5J0 574 aa8.2□□□□□ -1.1
RPA3-204ENST00000406109 RRP7AQ9Y3A4 280 aaKnown RBP8.2□□□□□ -1.1
RPA3-204ENST00000406109 DLG5Q8TDM6 1919 aa8.2□□□□□ -1.1
RPA3-204ENST00000406109 ABCC4O15439 1325 aa8.2□□□□□ -1.1
RPA3-204ENST00000406109 LAMA2P24043 3122 aaKnown RBP8.19□□□□□ -1.1
RPA3-204ENST00000406109 RAD17O75943 681 aa8.19□□□□□ -1.1
RPA3-204ENST00000406109 EGFRP00533 1210 aa8.19□□□□□ -1.1
RPA3-204ENST00000406109 U2AF1L5P0DN76 240 aaPredicted RBP8.19□□□□□ -1.1
RPA3-204ENST00000406109 MYL6BP14649 208 aa8.19□□□□□ -1.1
RPA3-204ENST00000406109 U2AF1Q01081 240 aaKnown RBP eCLIP8.19□□□□□ -1.1
RPA3-204ENST00000406109 KIAA2012Q0VF49 1180 aa8.19□□□□□ -1.1
RPA3-204ENST00000406109 NOGQ13253 232 aa8.19□□□□□ -1.1
RPA3-204ENST00000406109 PDIA6Q15084 440 aa8.19□□□□□ -1.1
RPA3-204ENST00000406109 GIGYF2Q6Y7W6 1299 aaKnown RBP8.19□□□□□ -1.1
RPA3-204ENST00000406109 CDC37L1Q7L3B6 337 aa8.19□□□□□ -1.1
RPA3-204ENST00000406109 USP48Q86UV5 1035 aa8.19□□□□□ -1.1
RPA3-204ENST00000406109 CFAP44Q96MT7 982 aa8.19□□□□□ -1.1
RPA3-204ENST00000406109 ZNF408Q9H9D4 720 aa8.19□□□□□ -1.1
RPA3-204ENST00000406109 LAMB2P55268 1798 aa8.19□□□□□ -1.1
RPA3-204ENST00000406109 KIAA0100Q14667 2235 aaKnown RBP8.19□□□□□ -1.1
RPA3-204ENST00000406109 DUOX1Q9NRD9 1551 aa8.18□□□□□ -1.1
RPA3-204ENST00000406109 ANKRD36CQ5JPF3 1778 aa8.18□□□□□ -1.1
RPA3-204ENST00000406109 GALR2O43603 387 aaPredicted RBP8.18□□□□□ -1.1
RPA3-204ENST00000406109 HUNKP57058 714 aa8.18□□□□□ -1.1
RPA3-204ENST00000406109 RALBP1Q15311 655 aa8.18□□□□□ -1.1
RPA3-204ENST00000406109 KIF6Q6ZMV9 814 aa8.18□□□□□ -1.1
RPA3-204ENST00000406109 SP8Q8IXZ3 490 aa8.18□□□□□ -1.1
RPA3-204ENST00000406109 NLRP3Q96P20 1036 aa8.18□□□□□ -1.1
RPA3-204ENST00000406109 CNOT7Q9UIV1 285 aaKnown RBP8.18□□□□□ -1.1
RPA3-204ENST00000406109 NUDCQ9Y266 331 aa8.18□□□□□ -1.1
RPA3-204ENST00000406109 AKAP11Q9UKA4 1901 aa8.18□□□□□ -1.1
RPA3-204ENST00000406109 CDHR2Q9BYE9 1310 aa8.18□□□□□ -1.1
RPA3-204ENST00000406109 BBOX1O75936 387 aa8.17□□□□□ -1.1
RPA3-204ENST00000406109 SOX10P56693 466 aa8.17□□□□□ -1.1
RPA3-204ENST00000406109 PROSER3Q2NL68 480 aa8.17□□□□□ -1.1
RPA3-204ENST00000406109 DPP8Q6V1X1 898 aaPredicted RBP8.17□□□□□ -1.1
RPA3-204ENST00000406109 SAMD7Q7Z3H4 446 aa8.17□□□□□ -1.1
RPA3-204ENST00000406109 MICALL2Q8IY33 904 aa8.17□□□□□ -1.1
RPA3-204ENST00000406109 THUMPD2Q9BTF0 503 aaKnown RBP8.17□□□□□ -1.1
RPA3-204ENST00000406109 UTP14AQ9BVJ6 771 aaKnown RBP8.17□□□□□ -1.1
RPA3-204ENST00000406109 KCNQ5Q9NR82 932 aa8.17□□□□□ -1.1
RPA3-204ENST00000406109 RNF186Q9NXI6 227 aa8.17□□□□□ -1.1
RPA3-204ENST00000406109 SAGE1Q9NXZ1 904 aa8.17□□□□□ -1.1
RPA3-204ENST00000406109 PSMD14O00487 310 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 TRPA1O75762 1119 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 COL4A1P02462 1669 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 HCLS1P14317 486 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms