RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 RBM17Q96I25 401 aaKnown RBP17.85■□□□□ 0.45
VAMP2-202ENST00000404970 YY1P25490 414 aa17.84■□□□□ 0.45
VAMP2-202ENST00000404970 CELF1Q92879 486 aaKnown RBP17.84■□□□□ 0.45
VAMP2-202ENST00000404970 CCDC85AQ96PX6 553 aaPredicted RBP17.84■□□□□ 0.45
VAMP2-202ENST00000404970 SEC31BQ9NQW1 1179 aa17.84■□□□□ 0.45
VAMP2-202ENST00000404970 COL4A5P29400 1685 aa17.84■□□□□ 0.45
VAMP2-202ENST00000404970 PPEF1O14829 653 aaPredicted RBP17.83■□□□□ 0.45
VAMP2-202ENST00000404970 PDE8AO60658 829 aa17.83■□□□□ 0.45
VAMP2-202ENST00000404970 ALDH1B1P30837 517 aa17.83■□□□□ 0.45
VAMP2-202ENST00000404970 SRCIN1Q9C0H9 1055 aa17.83■□□□□ 0.45
VAMP2-202ENST00000404970 A0A1B0GUL6 1792 aa17.83■□□□□ 0.45
VAMP2-202ENST00000404970 ALDH1L1O75891 902 aa17.82■□□□□ 0.44
VAMP2-202ENST00000404970 CTSWP56202 376 aa17.82■□□□□ 0.44
VAMP2-202ENST00000404970 GRAPQ13588 217 aa17.82■□□□□ 0.44
VAMP2-202ENST00000404970 EPHA10Q5JZY3 1008 aa17.82■□□□□ 0.44
VAMP2-202ENST00000404970 GRAPLQ8TC17 118 aaPredicted RBP17.82■□□□□ 0.44
VAMP2-202ENST00000404970 TTLL11Q8NHH1 800 aa17.82■□□□□ 0.44
VAMP2-202ENST00000404970 PLA2G12BQ9BX93 195 aa17.82■□□□□ 0.44
VAMP2-202ENST00000404970 KIF16BQ96L93 1317 aa17.81■□□□□ 0.44
VAMP2-202ENST00000404970 GRM8O00222 908 aa17.81■□□□□ 0.44
VAMP2-202ENST00000404970 FOXO4P98177 505 aa17.81■□□□□ 0.44
VAMP2-202ENST00000404970 CCDC93Q567U6 631 aa17.81■□□□□ 0.44
VAMP2-202ENST00000404970 C9orf131Q5VYM1 1079 aa17.81■□□□□ 0.44
VAMP2-202ENST00000404970 DDX46Q7L014 1031 aaKnown RBP17.81■□□□□ 0.44
VAMP2-202ENST00000404970 KAZALD1Q96I82 304 aa17.81■□□□□ 0.44
VAMP2-202ENST00000404970 YTHDC1Q96MU7 727 aaKnown RBP17.81■□□□□ 0.44
VAMP2-202ENST00000404970 UTYO14607 1347 aa17.8■□□□□ 0.44
VAMP2-202ENST00000404970 LTBP3Q9NS15 1303 aa17.8■□□□□ 0.44
VAMP2-202ENST00000404970 NBPF7P0C2Y1 421 aaPredicted RBP17.8■□□□□ 0.44
VAMP2-202ENST00000404970 GREM2Q9H772 168 aa17.8■□□□□ 0.44
VAMP2-202ENST00000404970 TRIM27P14373 513 aa17.79■□□□□ 0.44
VAMP2-202ENST00000404970 SUCLG2Q96I99 432 aa17.79■□□□□ 0.44
VAMP2-202ENST00000404970 RNF181Q9P0P0 153 aa17.79■□□□□ 0.44
VAMP2-202ENST00000404970 ATP6V0A2Q9Y487 856 aa17.79■□□□□ 0.44
VAMP2-202ENST00000404970 RTL9Q8NET4 1388 aa17.79■□□□□ 0.44
VAMP2-202ENST00000404970 FAM161AQ3B820 660 aa17.78■□□□□ 0.44
VAMP2-202ENST00000404970 CCDC152Q4G0S7 254 aa17.78■□□□□ 0.44
VAMP2-202ENST00000404970 USP44Q9H0E7 712 aa17.78■□□□□ 0.44
VAMP2-202ENST00000404970 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
VAMP2-202ENST00000404970 CSF1RP07333 972 aa17.77■□□□□ 0.44
VAMP2-202ENST00000404970 FKBP4Q02790 459 aaKnown RBP eCLIP17.77■□□□□ 0.44
VAMP2-202ENST00000404970 SOGA3Q5TF21 947 aa17.77■□□□□ 0.44
VAMP2-202ENST00000404970 ARHGAP45Q92619 1136 aa17.77■□□□□ 0.44
VAMP2-202ENST00000404970 FRAT1Q92837 279 aaPredicted RBP17.77■□□□□ 0.44
VAMP2-202ENST00000404970 API5Q9BZZ5 524 aaKnown RBP17.77■□□□□ 0.44
VAMP2-202ENST00000404970 BBOX1O75936 387 aa17.76■□□□□ 0.43
VAMP2-202ENST00000404970 LMNB1P20700 586 aa17.76■□□□□ 0.43
VAMP2-202ENST00000404970 ZNF277Q9NRM2 450 aaPredicted RBP17.76■□□□□ 0.43
VAMP2-202ENST00000404970 C9orf78Q9NZ63 289 aaPredicted RBP17.76■□□□□ 0.43
VAMP2-202ENST00000404970 ATF7IPQ6VMQ6 1270 aa17.75■□□□□ 0.43
VAMP2-202ENST00000404970 SP8Q8IXZ3 490 aa17.75■□□□□ 0.43
VAMP2-202ENST00000404970 ZNF784Q8NCA9 323 aaPredicted RBP17.75■□□□□ 0.43
VAMP2-202ENST00000404970 HSP90B1P14625 803 aaKnown RBP17.75■□□□□ 0.43
VAMP2-202ENST00000404970 RPS8P62241 208 aaKnown RBP17.75■□□□□ 0.43
VAMP2-202ENST00000404970 RTKN2Q8IZC4 609 aa17.75■□□□□ 0.43
VAMP2-202ENST00000404970 ANKRD44Q8N8A2 993 aa17.75■□□□□ 0.43
VAMP2-202ENST00000404970 CLUAP1Q96AJ1 413 aa17.75■□□□□ 0.43
VAMP2-202ENST00000404970 PSMD1Q99460 953 aa17.75■□□□□ 0.43
VAMP2-202ENST00000404970 RLBP1P12271 317 aa17.74■□□□□ 0.43
VAMP2-202ENST00000404970 CCT4P50991 539 aaKnown RBP17.74■□□□□ 0.43
VAMP2-202ENST00000404970 INTS3Q68E01 1043 aaKnown RBP17.74■□□□□ 0.43
VAMP2-202ENST00000404970 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
VAMP2-202ENST00000404970 ITGA6P23229 1130 aa17.73■□□□□ 0.43
VAMP2-202ENST00000404970 GPSM2P81274 684 aa17.73■□□□□ 0.43
VAMP2-202ENST00000404970 CC2D2BQ6DHV5 1058 aa17.73■□□□□ 0.43
VAMP2-202ENST00000404970 MEIS3Q99687 375 aa17.73■□□□□ 0.43
VAMP2-202ENST00000404970 BICC1Q9H694 974 aaKnown RBP17.73■□□□□ 0.43
VAMP2-202ENST00000404970 WTIPA6NIX2 430 aaPredicted RBP17.72■□□□□ 0.43
VAMP2-202ENST00000404970 ZKSCAN2Q63HK3 967 aa17.72■□□□□ 0.43
VAMP2-202ENST00000404970 RTFDC1Q9BY42 306 aaPredicted RBP17.72■□□□□ 0.43
VAMP2-202ENST00000404970 TMC4Q7Z404 712 aa17.71■□□□□ 0.43
VAMP2-202ENST00000404970 ANKRD18AQ8IVF6 992 aa17.71■□□□□ 0.43
VAMP2-202ENST00000404970 TMEM57Q8N5G2 664 aa17.71■□□□□ 0.43
VAMP2-202ENST00000404970 ZNF526Q8TF50 670 aaPredicted RBP17.71■□□□□ 0.43
VAMP2-202ENST00000404970 GPR101Q96P66 508 aaPredicted RBP17.71■□□□□ 0.43
VAMP2-202ENST00000404970 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
VAMP2-202ENST00000404970 IARSP41252 1262 aaKnown RBP17.7■□□□□ 0.42
VAMP2-202ENST00000404970 RABL6Q3YEC7 729 aaPredicted RBP17.7■□□□□ 0.42
VAMP2-202ENST00000404970 MPNDQ8N594 471 aa17.7■□□□□ 0.42
VAMP2-202ENST00000404970 ZNF594Q96JF6 807 aaPredicted RBP17.7■□□□□ 0.42
VAMP2-202ENST00000404970 POLLQ9UGP5 575 aa17.7■□□□□ 0.42
VAMP2-202ENST00000404970 RCAN3Q9UKA8 241 aa17.7■□□□□ 0.42
VAMP2-202ENST00000404970 ZNF646O15015 1829 aaPredicted RBP17.7■□□□□ 0.42
VAMP2-202ENST00000404970 DPP8Q6V1X1 898 aaPredicted RBP17.69■□□□□ 0.42
VAMP2-202ENST00000404970 CDC5LQ99459 802 aaKnown RBP17.69■□□□□ 0.42
VAMP2-202ENST00000404970 CHMP3Q9Y3E7 222 aa17.69■□□□□ 0.42
VAMP2-202ENST00000404970 ZNF541Q9H0D2 1346 aa17.69■□□□□ 0.42
VAMP2-202ENST00000404970 SCN9AQ15858 1988 aa17.69■□□□□ 0.42
VAMP2-202ENST00000404970 PLIN1O60240 522 aa17.69■□□□□ 0.42
VAMP2-202ENST00000404970 AOC3Q16853 763 aa17.69■□□□□ 0.42
VAMP2-202ENST00000404970 BSDC1Q9NW68 430 aaPredicted RBP17.69■□□□□ 0.42
VAMP2-202ENST00000404970 MINPP1Q9UNW1 487 aa17.69■□□□□ 0.42
VAMP2-202ENST00000404970 WDR90Q96KV7 1748 aa17.69■□□□□ 0.42
VAMP2-202ENST00000404970 NSFL1CQ9UNZ2 370 aaKnown RBP17.68■□□□□ 0.42
VAMP2-202ENST00000404970 ANKRD18BA2A2Z9 1011 aa17.67■□□□□ 0.42
VAMP2-202ENST00000404970 IFIT5Q13325 482 aaKnown RBP17.67■□□□□ 0.42
VAMP2-202ENST00000404970 GRIPAP1Q4V328 841 aa17.67■□□□□ 0.42
VAMP2-202ENST00000404970 TBC1D16Q8TBP0 767 aa17.67■□□□□ 0.42
VAMP2-202ENST00000404970 PANK1Q8TE04 598 aa17.67■□□□□ 0.42
VAMP2-202ENST00000404970 PODXL2Q9NZ53 605 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms