RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 BABAM1Q9NWV8 329 aa7.52□□□□□ -1.21
HMGB1P20-201ENST00000402555 ERBB4Q15303 1308 aa7.52□□□□□ -1.21
HMGB1P20-201ENST00000402555 CACNA1SQ13698 1873 aa7.51□□□□□ -1.21
HMGB1P20-201ENST00000402555 ELL2O00472 640 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P20-201ENST00000402555 PDE6BP35913 854 aa7.51□□□□□ -1.21
HMGB1P20-201ENST00000402555 C9orf131Q5VYM1 1079 aa7.51□□□□□ -1.21
HMGB1P20-201ENST00000402555 DUSP27Q5VZP5 1158 aa7.51□□□□□ -1.21
HMGB1P20-201ENST00000402555 NUTM1Q86Y26 1132 aa7.51□□□□□ -1.21
HMGB1P20-201ENST00000402555 XAGE3Q8WTP9 111 aa7.51□□□□□ -1.21
HMGB1P20-201ENST00000402555 ZNF428Q96B54 188 aa7.51□□□□□ -1.21
HMGB1P20-201ENST00000402555 CFAP44Q96MT7 982 aa7.51□□□□□ -1.21
HMGB1P20-201ENST00000402555 CHPF2Q9P2E5 772 aa7.51□□□□□ -1.21
HMGB1P20-201ENST00000402555 UBN2Q6ZU65 1347 aa7.51□□□□□ -1.21
HMGB1P20-201ENST00000402555 TNRC6CQ9HCJ0 1690 aaKnown RBP7.51□□□□□ -1.21
HMGB1P20-201ENST00000402555 SLX4Q8IY92 1834 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 ABCC12Q96J65 1359 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 ERVV-1B6SEH8 477 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 C21orf2O43822 256 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 ZNF853P0CG23 659 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 SRGNP10124 158 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 PRELPP51888 382 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 HDGFL1Q5TGJ6 251 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 SUSD4Q5VX71 490 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 TPTE2Q6XPS3 522 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 COPS6Q7L5N1 327 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 GPBP1L1Q9HC44 474 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 IFT57Q9NWB7 429 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 RNF181Q9P0P0 153 aa7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 SALL2Q9Y467 1007 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P20-201ENST00000402555 SBF1O95248 1867 aa7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 NFKBIEO00221 500 aa7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 GTF2E1P29083 439 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 GNAI1P63096 354 aa7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 ERFEQ4G0M1 354 aa7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 PRPF40BQ6NWY9 871 aaKnown RBP7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 GIGYF2Q6Y7W6 1299 aaKnown RBP7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 ZNF34Q8IZ26 560 aa7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 FAM9BQ8IZU0 186 aa7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 C8orf58Q8NAV2 365 aa7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 TSR2Q969E8 191 aaKnown RBP7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 DDX21Q9NR30 783 aaKnown RBP eCLIP7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 PCDHGA4Q9Y5G9 962 aa7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 CCDC88AQ3V6T2 1871 aa7.49□□□□□ -1.21
HMGB1P20-201ENST00000402555 NTSR2O95665 410 aa7.48□□□□□ -1.21
HMGB1P20-201ENST00000402555 HOXB7P09629 217 aa7.48□□□□□ -1.21
HMGB1P20-201ENST00000402555 NUDT7P0C024 238 aa7.48□□□□□ -1.21
HMGB1P20-201ENST00000402555 CALD1Q05682 793 aaKnown RBP7.48□□□□□ -1.21
HMGB1P20-201ENST00000402555 STYK1Q6J9G0 422 aa7.48□□□□□ -1.21
HMGB1P20-201ENST00000402555 OLFM4Q6UX06 510 aa7.48□□□□□ -1.21
HMGB1P20-201ENST00000402555 SLC51AQ86UW1 340 aa7.48□□□□□ -1.21
HMGB1P20-201ENST00000402555 WWC1Q8IX03 1113 aa7.48□□□□□ -1.21
HMGB1P20-201ENST00000402555 TSPYL6Q8N831 410 aa7.48□□□□□ -1.21
HMGB1P20-201ENST00000402555 MASTLQ96GX5 879 aa7.48□□□□□ -1.21
HMGB1P20-201ENST00000402555 GPHNQ9NQX3 736 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P20-201ENST00000402555 PDZRN3Q9UPQ7 1066 aa7.48□□□□□ -1.21
HMGB1P20-201ENST00000402555 ANKRD36CQ5JPF3 1778 aa7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 ARFGEF2Q9Y6D5 1785 aa7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 KLRG2A4D1S0 409 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 TCERG1O14776 1098 aaKnown RBP7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 NPR1P16066 1061 aa7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 C1QTNF8P60827 252 aa7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 FOXK1P85037 733 aa7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 SYNE4Q8N205 404 aa7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 CNKSR1Q969H4 720 aa7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 NYXQ9GZU5 481 aa7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 PHAXQ9H814 394 aaKnown RBP7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 NMRK2Q9NPI5 230 aa7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 DBF4Q9UBU7 674 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 FER1L6Q2WGJ9 1857 aa7.47□□□□□ -1.21
HMGB1P20-201ENST00000402555 IBTKQ9P2D0 1353 aaPredicted RBP7.46□□□□□ -1.21
HMGB1P20-201ENST00000402555 ATP5J2-PTCD1G3V325 749 aa7.46□□□□□ -1.22
HMGB1P20-201ENST00000402555 LMNB1P20700 586 aa7.46□□□□□ -1.22
HMGB1P20-201ENST00000402555 TCIRG1Q13488 830 aa7.46□□□□□ -1.22
HMGB1P20-201ENST00000402555 CCDC27Q2M243 656 aa7.46□□□□□ -1.22
HMGB1P20-201ENST00000402555 PARP10Q53GL7 1025 aa7.46□□□□□ -1.22
HMGB1P20-201ENST00000402555 PPP1R42Q7Z4L9 355 aa7.46□□□□□ -1.22
HMGB1P20-201ENST00000402555 NLRP10Q86W26 655 aa7.46□□□□□ -1.22
HMGB1P20-201ENST00000402555 PTCD2Q8WV60 388 aaKnown RBP7.46□□□□□ -1.22
HMGB1P20-201ENST00000402555 C7orf43Q8WVR3 580 aa7.46□□□□□ -1.22
HMGB1P20-201ENST00000402555 UTP14AQ9BVJ6 771 aaKnown RBP7.46□□□□□ -1.22
HMGB1P20-201ENST00000402555 RYDENQ9NUL5 291 aaKnown RBP7.46□□□□□ -1.22
HMGB1P20-201ENST00000402555 TIAM2Q8IVF5 1701 aa7.46□□□□□ -1.22
HMGB1P20-201ENST00000402555 HCLS1P14317 486 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P20-201ENST00000402555 CRY2Q49AN0 593 aa7.45□□□□□ -1.22
HMGB1P20-201ENST00000402555 HSP90AB3PQ58FF7 597 aa7.45□□□□□ -1.22
HMGB1P20-201ENST00000402555 ANKRD13DQ6ZTN6 518 aa7.45□□□□□ -1.22
HMGB1P20-201ENST00000402555 PLBD2Q8NHP8 589 aa7.45□□□□□ -1.22
HMGB1P20-201ENST00000402555 RPGRQ92834 1020 aaKnown RBP7.45□□□□□ -1.22
HMGB1P20-201ENST00000402555 TAOK3Q9H2K8 898 aa7.45□□□□□ -1.22
HMGB1P20-201ENST00000402555 HYPKQ9NX55 129 aa7.45□□□□□ -1.22
HMGB1P20-201ENST00000402555 TRMT112Q9UI30 125 aaKnown RBP7.45□□□□□ -1.22
HMGB1P20-201ENST00000402555 LHX6Q9UPM6 363 aa7.45□□□□□ -1.22
HMGB1P20-201ENST00000402555 LAMB2P55268 1798 aa7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 ALDH1B1P30837 517 aa7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 TWISTNBQ3B726 338 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 CCDC93Q567U6 631 aa7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 RTL5Q5HYW3 569 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 RIC3Q7Z5B4 369 aa7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 PLPP6Q8IY26 295 aa7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 ISCA1Q9BUE6 129 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms