RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ESPNB1AK53 854 aa15.78■□□□□ 0.12
VAPA-202ENST00000400000 TRIM27P14373 513 aa15.78■□□□□ 0.12
VAPA-202ENST00000400000 OGFOD1Q8N543 542 aa15.78■□□□□ 0.12
VAPA-202ENST00000400000 ZKSCAN3Q9BRR0 538 aa15.78■□□□□ 0.12
VAPA-202ENST00000400000 TNPO1Q92973 898 aaKnown RBP15.77■□□□□ 0.12
VAPA-202ENST00000400000 ACEP12821 1306 aa15.77■□□□□ 0.12
VAPA-202ENST00000400000 GCOM1H8Y6P7 765 aaPredicted RBP15.77■□□□□ 0.12
VAPA-202ENST00000400000 MYZAPP0CAP1 466 aa15.77■□□□□ 0.12
VAPA-202ENST00000400000 TBC1D9Q6ZT07 1266 aa15.77■□□□□ 0.12
VAPA-202ENST00000400000 EVI5LQ96CN4 794 aa15.77■□□□□ 0.12
VAPA-202ENST00000400000 CRNKL1Q9BZJ0 848 aaKnown RBP15.77■□□□□ 0.12
VAPA-202ENST00000400000 KIF5BP33176 963 aa15.77■□□□□ 0.12
VAPA-202ENST00000400000 CCDC152Q4G0S7 254 aa15.77■□□□□ 0.12
VAPA-202ENST00000400000 DAPK1P53355 1430 aa15.77■□□□□ 0.12
VAPA-202ENST00000400000 HARSP12081 509 aaKnown RBP15.77■□□□□ 0.11
VAPA-202ENST00000400000 IDI1Q13907 227 aa15.77■□□□□ 0.11
VAPA-202ENST00000400000 CETN1Q12798 172 aa15.77■□□□□ 0.11
VAPA-202ENST00000400000 WTAPQ15007 396 aa15.77■□□□□ 0.11
VAPA-202ENST00000400000 GPIHBP1Q8IV16 184 aa15.77■□□□□ 0.11
VAPA-202ENST00000400000 MBIPQ9NS73 344 aa15.77■□□□□ 0.11
VAPA-202ENST00000400000 PHAXQ9H814 394 aaKnown RBP15.77■□□□□ 0.11
VAPA-202ENST00000400000 ADCY5O95622 1261 aa15.76■□□□□ 0.11
VAPA-202ENST00000400000 STAT6P42226 847 aa15.76■□□□□ 0.11
VAPA-202ENST00000400000 CTR9Q6PD62 1173 aa15.76■□□□□ 0.11
VAPA-202ENST00000400000 KIF18AQ8NI77 898 aa15.76■□□□□ 0.11
VAPA-202ENST00000400000 EEF2P13639 858 aaKnown RBP15.76■□□□□ 0.11
VAPA-202ENST00000400000 ZYXQ15942 572 aaKnown RBP15.76■□□□□ 0.11
VAPA-202ENST00000400000 ZCRB1Q8TBF4 217 aaKnown RBP15.76■□□□□ 0.11
VAPA-202ENST00000400000 XAGE3Q8WTP9 111 aa15.76■□□□□ 0.11
VAPA-202ENST00000400000 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
VAPA-202ENST00000400000 NSFL1CQ9UNZ2 370 aaKnown RBP15.76■□□□□ 0.11
VAPA-202ENST00000400000 SSX2IPQ9Y2D8 614 aa15.76■□□□□ 0.11
VAPA-202ENST00000400000 NCOA7Q8NI08 942 aa15.76■□□□□ 0.11
VAPA-202ENST00000400000 A0A1W2PRG0 241 aa15.76■□□□□ 0.11
VAPA-202ENST00000400000 EIF6P56537 245 aaKnown RBP15.76■□□□□ 0.11
VAPA-202ENST00000400000 SIRT1Q96EB6 747 aa15.76■□□□□ 0.11
VAPA-202ENST00000400000 GTF2F1P35269 517 aaKnown RBP eCLIP15.75■□□□□ 0.11
VAPA-202ENST00000400000 HFM1A2PYH4 1435 aa15.75■□□□□ 0.11
VAPA-202ENST00000400000 PARP3Q9Y6F1 533 aa15.75■□□□□ 0.11
VAPA-202ENST00000400000 HMGB1P09429 215 aaKnown RBP15.75■□□□□ 0.11
VAPA-202ENST00000400000 AMPD3Q01432 767 aa15.75■□□□□ 0.11
VAPA-202ENST00000400000 IPO4Q8TEX9 1081 aaKnown RBP15.75■□□□□ 0.11
VAPA-202ENST00000400000 HDAC9Q9UKV0 1011 aa15.75■□□□□ 0.11
VAPA-202ENST00000400000 STX6O43752 255 aa15.75■□□□□ 0.11
VAPA-202ENST00000400000 DTNBO60941 627 aa15.75■□□□□ 0.11
VAPA-202ENST00000400000 FNBP4Q8N3X1 1017 aaPredicted RBP15.75■□□□□ 0.11
VAPA-202ENST00000400000 BRF1Q92994 677 aa15.75■□□□□ 0.11
VAPA-202ENST00000400000 ALS2CR12Q96Q35 445 aa15.75■□□□□ 0.11
VAPA-202ENST00000400000 NAPAP54920 295 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 COPS6Q7L5N1 327 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 UTP14AQ9BVJ6 771 aaKnown RBP15.74■□□□□ 0.11
VAPA-202ENST00000400000 CC2D2AQ9P2K1 1620 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 KRT13P13646 458 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 CCDC63Q8NA47 563 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 SCAND2PQ9GZW5 306 aaPredicted RBP15.74■□□□□ 0.11
VAPA-202ENST00000400000 CNPY2Q9Y2B0 182 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 CCDC12Q8WUD4 166 aaPredicted RBP15.74■□□□□ 0.11
VAPA-202ENST00000400000 HECW1Q76N89 1606 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 TTF1Q15361 905 aaPredicted RBP15.74■□□□□ 0.11
VAPA-202ENST00000400000 DDB1Q16531 1140 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 FSD2A1L4K1 749 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 GSTA5Q7RTV2 222 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 SMARCC2Q8TAQ2 1214 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 TSNARE1Q96NA8 513 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 ALG1Q9BT22 464 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 RPGRIP1LQ68CZ1 1315 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 N4BP3O15049 544 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 ANKRD13DQ6ZTN6 518 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 CCDC50Q8IVM0 306 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 ECHDC1Q9NTX5 307 aa15.74■□□□□ 0.11
VAPA-202ENST00000400000 NCKAP5LQ9HCH0 1330 aa15.73■□□□□ 0.11
VAPA-202ENST00000400000 SUPT6HQ7KZ85 1726 aaKnown RBP15.73■□□□□ 0.11
VAPA-202ENST00000400000 DHX58Q96C10 678 aa15.73■□□□□ 0.11
VAPA-202ENST00000400000 CAPZA3Q96KX2 299 aa15.73■□□□□ 0.11
VAPA-202ENST00000400000 SH2B1Q9NRF2 756 aaPredicted RBP15.73■□□□□ 0.11
VAPA-202ENST00000400000 EHBP1L1Q8N3D4 1523 aa15.73■□□□□ 0.11
VAPA-202ENST00000400000 POLD1P28340 1107 aa15.73■□□□□ 0.11
VAPA-202ENST00000400000 Q6ZUG5 572 aa15.73■□□□□ 0.11
VAPA-202ENST00000400000 MAGEB6Q8N7X4 407 aa15.73■□□□□ 0.11
VAPA-202ENST00000400000 TBC1D2Q9BYX2 928 aa15.73■□□□□ 0.11
VAPA-202ENST00000400000 MCM7P33993 719 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 MAP9Q49MG5 647 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 IKBKGQ9Y6K9 419 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 IGHDP01880 384 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 STX17P56962 302 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 NAA16Q6N069 864 aaPredicted RBP15.72■□□□□ 0.11
VAPA-202ENST00000400000 LDHCP07864 332 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 FERP16591 822 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 RAB3GAP1Q15042 981 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 EP400NLQ6ZTU2 488 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 ZMYND15Q9H091 742 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 SNRPA1P09661 255 aaKnown RBP15.72■□□□□ 0.11
VAPA-202ENST00000400000 MXRA7P84157 204 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 STX1AQ16623 288 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 MAEAQ7L5Y9 396 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 GPATCH11Q8N954 259 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 TBC1D5Q92609 795 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 GINS2Q9Y248 185 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 MSH6P52701 1360 aa15.72■□□□□ 0.11
VAPA-202ENST00000400000 TOM1O60784 492 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms