RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 GRAPLQ8TC17 118 aaPredicted RBP22.14■■□□□ 1.13
SMIM11A-202ENST00000399295 TMX4Q9H1E5 349 aaPredicted RBP22.14■■□□□ 1.13
SMIM11A-202ENST00000399295 DDX60Q8IY21 1712 aaKnown RBP22.14■■□□□ 1.13
SMIM11A-202ENST00000399295 SBF1O95248 1867 aa22.13■■□□□ 1.13
SMIM11A-202ENST00000399295 LTBP3Q9NS15 1303 aa22.13■■□□□ 1.13
SMIM11A-202ENST00000399295 PRELPP51888 382 aa22.13■■□□□ 1.13
SMIM11A-202ENST00000399295 CCDC152Q4G0S7 254 aa22.13■■□□□ 1.13
SMIM11A-202ENST00000399295 CACNA1SQ13698 1873 aa22.13■■□□□ 1.13
SMIM11A-202ENST00000399295 ALDH1L1O75891 902 aa22.12■■□□□ 1.13
SMIM11A-202ENST00000399295 SRCIN1Q9C0H9 1055 aa22.12■■□□□ 1.13
SMIM11A-202ENST00000399295 ATP6V0A2Q9Y487 856 aa22.12■■□□□ 1.13
SMIM11A-202ENST00000399295 BRPF1P55201 1214 aaPredicted RBP22.11■■□□□ 1.13
SMIM11A-202ENST00000399295 FKBP4Q02790 459 aaKnown RBP eCLIP22.11■■□□□ 1.13
SMIM11A-202ENST00000399295 NOB1Q9ULX3 412 aaKnown RBP22.11■■□□□ 1.13
SMIM11A-202ENST00000399295 LAMB2P55268 1798 aa22.11■■□□□ 1.13
SMIM11A-202ENST00000399295 NEFLP07196 543 aa22.1■■□□□ 1.13
SMIM11A-202ENST00000399295 CASP7P55210 303 aa22.1■■□□□ 1.13
SMIM11A-202ENST00000399295 CTSWP56202 376 aa22.1■■□□□ 1.13
SMIM11A-202ENST00000399295 SP8Q8IXZ3 490 aa22.1■■□□□ 1.13
SMIM11A-202ENST00000399295 CELF1Q92879 486 aaKnown RBP22.1■■□□□ 1.13
SMIM11A-202ENST00000399295 CCDC85AQ96PX6 553 aaPredicted RBP22.1■■□□□ 1.13
SMIM11A-202ENST00000399295 GPBP1L1Q9HC44 474 aaPredicted RBP22.1■■□□□ 1.13
SMIM11A-202ENST00000399295 SUPT16HQ9Y5B9 1047 aaKnown RBP22.1■■□□□ 1.13
SMIM11A-202ENST00000399295 FER1L6Q2WGJ9 1857 aa22.09■■□□□ 1.13
SMIM11A-202ENST00000399295 GRM8O00222 908 aa22.09■■□□□ 1.13
SMIM11A-202ENST00000399295 TMC4Q7Z404 712 aa22.09■■□□□ 1.13
SMIM11A-202ENST00000399295 SLC51AQ86UW1 340 aa22.09■■□□□ 1.13
SMIM11A-202ENST00000399295 SEC31BQ9NQW1 1179 aa22.09■■□□□ 1.13
SMIM11A-202ENST00000399295 C9orf78Q9NZ63 289 aaPredicted RBP22.09■■□□□ 1.13
SMIM11A-202ENST00000399295 GTF3C3Q9Y5Q9 886 aa22.09■■□□□ 1.13
SMIM11A-202ENST00000399295 RPS8P62241 208 aaKnown RBP22.08■■□□□ 1.13
SMIM11A-202ENST00000399295 TTLL11Q8NHH1 800 aa22.08■■□□□ 1.13
SMIM11A-202ENST00000399295 PSMD1Q99460 953 aa22.08■■□□□ 1.13
SMIM11A-202ENST00000399295 PLA2G12BQ9BX93 195 aa22.08■■□□□ 1.13
SMIM11A-202ENST00000399295 RCAN3Q9UKA8 241 aa22.08■■□□□ 1.13
SMIM11A-202ENST00000399295 ZNF526Q8TF50 670 aaPredicted RBP22.07■■□□□ 1.12
SMIM11A-202ENST00000399295 API5Q9BZZ5 524 aaKnown RBP22.07■■□□□ 1.12
SMIM11A-202ENST00000399295 ZNF277Q9NRM2 450 aaPredicted RBP22.07■■□□□ 1.12
SMIM11A-202ENST00000399295 KIF16BQ96L93 1317 aa22.06■■□□□ 1.12
SMIM11A-202ENST00000399295 SNED1Q8TER0 1413 aa22.06■■□□□ 1.12
SMIM11A-202ENST00000399295 CCDC88AQ3V6T2 1871 aa22.05■■□□□ 1.12
SMIM11A-202ENST00000399295 BCAR3O75815 825 aa22.05■■□□□ 1.12
SMIM11A-202ENST00000399295 GREM2Q9H772 168 aa22.05■■□□□ 1.12
SMIM11A-202ENST00000399295 DICER1Q9UPY3 1922 aaKnown RBP22.05■■□□□ 1.12
SMIM11A-202ENST00000399295 KDM2BQ8NHM5 1336 aa22.05■■□□□ 1.12
SMIM11A-202ENST00000399295 DPP8Q6V1X1 898 aaPredicted RBP22.04■■□□□ 1.12
SMIM11A-202ENST00000399295 MPNDQ8N594 471 aa22.04■■□□□ 1.12
SMIM11A-202ENST00000399295 ARHGAP45Q92619 1136 aa22.04■■□□□ 1.12
SMIM11A-202ENST00000399295 CDC5LQ99459 802 aaKnown RBP22.04■■□□□ 1.12
SMIM11A-202ENST00000399295 RTL9Q8NET4 1388 aa22.03■■□□□ 1.12
SMIM11A-202ENST00000399295 IPO8O15397 1037 aaKnown RBP22.03■■□□□ 1.12
SMIM11A-202ENST00000399295 CSF1RP07333 972 aa22.03■■□□□ 1.12
SMIM11A-202ENST00000399295 IARSP41252 1262 aaKnown RBP22.03■■□□□ 1.12
SMIM11A-202ENST00000399295 FOXO4P98177 505 aa22.03■■□□□ 1.12
SMIM11A-202ENST00000399295 ANKRD18AQ8IVF6 992 aa22.03■■□□□ 1.12
SMIM11A-202ENST00000399295 NBPF7P0C2Y1 421 aaPredicted RBP22.02■■□□□ 1.12
SMIM11A-202ENST00000399295 CCT4P50991 539 aaKnown RBP22.02■■□□□ 1.12
SMIM11A-202ENST00000399295 DPY19L2Q6NUT2 758 aa22.02■■□□□ 1.12
SMIM11A-202ENST00000399295 FRAT1Q92837 279 aaPredicted RBP22.02■■□□□ 1.12
SMIM11A-202ENST00000399295 VPS33BQ9H267 617 aa22.02■■□□□ 1.12
SMIM11A-202ENST00000399295 UTYO14607 1347 aa22.02■■□□□ 1.12
SMIM11A-202ENST00000399295 TAF1P21675 1872 aa22.01■■□□□ 1.11
SMIM11A-202ENST00000399295 SUPT20HQ8NEM7 779 aa22.01■■□□□ 1.11
SMIM11A-202ENST00000399295 RTFDC1Q9BY42 306 aaPredicted RBP22.01■■□□□ 1.11
SMIM11A-202ENST00000399295 NSFL1CQ9UNZ2 370 aaKnown RBP22.01■■□□□ 1.11
SMIM11A-202ENST00000399295 ITGA6P23229 1130 aa22■■□□□ 1.11
SMIM11A-202ENST00000399295 FAM161AQ3B820 660 aa22■■□□□ 1.11
SMIM11A-202ENST00000399295 EPHA10Q5JZY3 1008 aa22■■□□□ 1.11
SMIM11A-202ENST00000399295 COL4A1P02462 1669 aa22■■□□□ 1.11
SMIM11A-202ENST00000399295 LMBR1LQ6UX01 489 aa21.99■■□□□ 1.11
SMIM11A-202ENST00000399295 LARGE2Q8N3Y3 721 aa21.99■■□□□ 1.11
SMIM11A-202ENST00000399295 JDP2Q8WYK2 163 aa21.99■■□□□ 1.11
SMIM11A-202ENST00000399295 SUCLG2Q96I99 432 aa21.99■■□□□ 1.11
SMIM11A-202ENST00000399295 USP44Q9H0E7 712 aa21.99■■□□□ 1.11
SMIM11A-202ENST00000399295 CHMP3Q9Y3E7 222 aa21.99■■□□□ 1.11
SMIM11A-202ENST00000399295 GLTPD2A6NH11 291 aa21.98■■□□□ 1.11
SMIM11A-202ENST00000399295 GPSM2P81274 684 aa21.98■■□□□ 1.11
SMIM11A-202ENST00000399295 ATF7IPQ6VMQ6 1270 aa21.98■■□□□ 1.11
SMIM11A-202ENST00000399295 ANKRD18BA2A2Z9 1011 aa21.97■■□□□ 1.11
SMIM11A-202ENST00000399295 PPIP5K2O43314 1243 aa21.97■■□□□ 1.11
SMIM11A-202ENST00000399295 TRIM27P14373 513 aa21.97■■□□□ 1.11
SMIM11A-202ENST00000399295 IGHMBP2P38935 993 aaKnown RBP21.97■■□□□ 1.11
SMIM11A-202ENST00000399295 IFIT5Q13325 482 aaKnown RBP21.97■■□□□ 1.11
SMIM11A-202ENST00000399295 ERICH6BQ5W0A0 696 aa21.97■■□□□ 1.11
SMIM11A-202ENST00000399295 KAZALD1Q96I82 304 aa21.97■■□□□ 1.11
SMIM11A-202ENST00000399295 BSDC1Q9NW68 430 aaPredicted RBP21.97■■□□□ 1.11
SMIM11A-202ENST00000399295 ANKIB1Q9P2G1 1089 aa21.97■■□□□ 1.11
SMIM11A-202ENST00000399295 C1QTNF8P60827 252 aa21.96■■□□□ 1.11
SMIM11A-202ENST00000399295 AOC3Q16853 763 aa21.96■■□□□ 1.11
SMIM11A-202ENST00000399295 ZKSCAN2Q63HK3 967 aa21.96■■□□□ 1.11
SMIM11A-202ENST00000399295 MYH3P11055 1940 aa21.96■■□□□ 1.11
SMIM11A-202ENST00000399295 C6orf229H3BNL8 230 aa21.95■■□□□ 1.1
SMIM11A-202ENST00000399295 RRP1P56182 461 aaKnown RBP21.95■■□□□ 1.1
SMIM11A-202ENST00000399295 CCDC57Q2TAC2 916 aa21.95■■□□□ 1.1
SMIM11A-202ENST00000399295 INTS3Q68E01 1043 aaKnown RBP21.95■■□□□ 1.1
SMIM11A-202ENST00000399295 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.95■■□□□ 1.1
SMIM11A-202ENST00000399295 MPHOSPH8Q99549 860 aa21.95■■□□□ 1.1
SMIM11A-202ENST00000399295 BICC1Q9H694 974 aaKnown RBP21.95■■□□□ 1.1
SMIM11A-202ENST00000399295 NMRK2Q9NPI5 230 aa21.95■■□□□ 1.1
SMIM11A-202ENST00000399295 PODXL2Q9NZ53 605 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms