RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 EVI5LQ96CN4 794 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 KCNQ2O43526 872 aa8.35□□□□□ -1.07
CX3CR1-202ENST00000399220 NTSR2O95665 410 aa8.35□□□□□ -1.07
CX3CR1-202ENST00000399220 SLC27A3Q5K4L6 730 aa8.35□□□□□ -1.07
CX3CR1-202ENST00000399220 PA2G4Q9UQ80 394 aaKnown RBP8.35□□□□□ -1.07
CX3CR1-202ENST00000399220 LAMA4Q16363 1823 aa8.35□□□□□ -1.07
CX3CR1-202ENST00000399220 DDIT3P35638 169 aa8.35□□□□□ -1.07
CX3CR1-202ENST00000399220 CTSWP56202 376 aa8.35□□□□□ -1.07
CX3CR1-202ENST00000399220 BECN1Q14457 450 aa8.35□□□□□ -1.07
CX3CR1-202ENST00000399220 TTLL11Q8NHH1 800 aa8.35□□□□□ -1.07
CX3CR1-202ENST00000399220 ZNF652Q9Y2D9 606 aa8.35□□□□□ -1.07
CX3CR1-202ENST00000399220 MAST2Q6P0Q8 1798 aa8.34□□□□□ -1.07
CX3CR1-202ENST00000399220 VGLL2Q8N8G2 317 aa8.34□□□□□ -1.07
CX3CR1-202ENST00000399220 NARFQ9UHQ1 456 aa8.34□□□□□ -1.07
CX3CR1-202ENST00000399220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.34□□□□□ -1.07
CX3CR1-202ENST00000399220 MED23Q9ULK4 1368 aa8.34□□□□□ -1.07
CX3CR1-202ENST00000399220 TNRC6CQ9HCJ0 1690 aaKnown RBP8.34□□□□□ -1.07
CX3CR1-202ENST00000399220 DUOX1Q9NRD9 1551 aa8.34□□□□□ -1.07
CX3CR1-202ENST00000399220 IL1RAPL2Q9NP60 686 aa8.34□□□□□ -1.07
CX3CR1-202ENST00000399220 RIPOR2Q9Y4F9 1068 aa8.34□□□□□ -1.07
CX3CR1-202ENST00000399220 LTBP1Q14766 1721 aa8.34□□□□□ -1.07
CX3CR1-202ENST00000399220 SGSM2O43147 1006 aa8.34□□□□□ -1.08
CX3CR1-202ENST00000399220 IFIT2P09913 472 aaKnown RBP8.34□□□□□ -1.08
CX3CR1-202ENST00000399220 ZNF772Q68DY9 489 aaPredicted RBP8.34□□□□□ -1.08
CX3CR1-202ENST00000399220 FAM196AQ6ZSG2 479 aa8.34□□□□□ -1.08
CX3CR1-202ENST00000399220 SEPT12Q8IYM1 358 aa8.34□□□□□ -1.08
CX3CR1-202ENST00000399220 ACSBG1Q96GR2 724 aa8.34□□□□□ -1.08
CX3CR1-202ENST00000399220 HAUS7Q99871 368 aa8.34□□□□□ -1.08
CX3CR1-202ENST00000399220 CCDC9Q9Y3X0 531 aaKnown RBP8.34□□□□□ -1.08
CX3CR1-202ENST00000399220 MFAP1P55081 439 aaKnown RBP8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 RABEP1Q15276 862 aa8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 SF3B3Q15393 1217 aaKnown RBP8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 NUTM1Q86Y26 1132 aa8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 IGSF3O75054 1194 aa8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 MEX3CQ5U5Q3 659 aaKnown RBP8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 AACSQ86V21 672 aa8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 UTP14AQ9BVJ6 771 aaKnown RBP8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 ANTXR1Q9H6X2 564 aa8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 BCL2L12Q9HB09 334 aa8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 DBNLQ9UJU6 430 aaKnown RBP8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 AKAP2Q9Y2D5 859 aa8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 SH3TC1Q8TE82 1336 aa8.33□□□□□ -1.08
CX3CR1-202ENST00000399220 TFCP2Q12800 502 aa8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 MROH5Q6ZUA9 1318 aa8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 COL4A1P02462 1669 aa8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 FGFR2P21802 821 aa8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 SUSD4Q5VX71 490 aa8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 SYTL4Q96C24 671 aaPredicted RBP8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 TBC1D2Q9BYX2 928 aa8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 QTRT2Q9H974 415 aaKnown RBP8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 IRS4O14654 1257 aaPredicted RBP8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 HSPA4P34932 840 aa8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 RBM6P78332 1123 aaKnown RBP8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 OS9Q13438 667 aaPredicted RBP8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 TSGA10IPQ3SY00 556 aa8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 RUFY2Q8WXA3 655 aa8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 LSG1Q9H089 658 aaKnown RBP8.32□□□□□ -1.08
CX3CR1-202ENST00000399220 PLSCR1O15162 318 aa8.31□□□□□ -1.08
CX3CR1-202ENST00000399220 CCDC57Q2TAC2 916 aa8.31□□□□□ -1.08
CX3CR1-202ENST00000399220 ALDH8A1Q9H2A2 487 aaPredicted RBP8.31□□□□□ -1.08
CX3CR1-202ENST00000399220 ANKRD18BA2A2Z9 1011 aa8.31□□□□□ -1.08
CX3CR1-202ENST00000399220 IFIT5Q13325 482 aaKnown RBP8.31□□□□□ -1.08
CX3CR1-202ENST00000399220 USPL1Q5W0Q7 1092 aa8.31□□□□□ -1.08
CX3CR1-202ENST00000399220 NYXQ9GZU5 481 aa8.31□□□□□ -1.08
CX3CR1-202ENST00000399220 MYH13Q9UKX3 1938 aa8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 FAM89AQ96GI7 184 aa8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 TLR7Q9NYK1 1049 aaKnown RBP8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 TIAM2Q8IVF5 1701 aa8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 ANKRD31Q8N7Z5 1873 aa8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 PDS5AQ29RF7 1337 aaKnown RBP8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 DEKP35659 375 aaKnown RBP8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 MCM2P49736 904 aa8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 TMED8Q6PL24 325 aaPredicted RBP8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 KRT27Q7Z3Y8 459 aa8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 KLHDC4Q8TBB5 520 aa8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 TM6SF1Q9BZW5 370 aa8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 TRMT112Q9UI30 125 aaKnown RBP8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 KAT6BQ8WYB5 2073 aa8.3□□□□□ -1.08
CX3CR1-202ENST00000399220 APBB1O00213 710 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 ITGA6P23229 1130 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 SSFA2P28290 1259 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 ARID4AP29374 1257 aaPredicted RBP8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 CIZ1Q9ULV3 898 aaPredicted RBP8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 TBC1D2BQ9UPU7 963 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 DLEC1Q9Y238 1755 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 LRRC24Q50LG9 513 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 PTF1AQ7RTS3 328 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 NPM2Q86SE8 214 aaKnown RBP8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 GREM2Q9H772 168 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 CCNL1Q9UK58 526 aaPredicted RBP8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 CCDC152Q4G0S7 254 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 KBTBD3Q8NAB2 608 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 MAP4K1Q92918 833 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 HELLSQ9NRZ9 838 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 CARMIL3Q8ND23 1372 aa8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 RPAP1Q9BWH6 1393 aaPredicted RBP8.29□□□□□ -1.08
CX3CR1-202ENST00000399220 PDE8BO95263 885 aa8.28□□□□□ -1.08
CX3CR1-202ENST00000399220 MCCP23508 829 aa8.28□□□□□ -1.08
CX3CR1-202ENST00000399220 TSHZ3Q63HK5 1081 aa8.28□□□□□ -1.08
CX3CR1-202ENST00000399220 ERICH6Q7L0X2 663 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms