RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 ORC3Q9UBD5 711 aaPredicted RBP17.6■□□□□ 0.41
CYLD-202ENST00000398568 FERMT3Q86UX7 667 aa17.59■□□□□ 0.41
CYLD-202ENST00000398568 LRRCC1Q9C099 1032 aa17.59■□□□□ 0.41
CYLD-202ENST00000398568 SEC31AO94979 1220 aaKnown RBP17.59■□□□□ 0.41
CYLD-202ENST00000398568 EXOC4Q96A65 974 aa17.59■□□□□ 0.41
CYLD-202ENST00000398568 ZSCAN31Q96LW9 406 aaPredicted RBP17.59■□□□□ 0.41
CYLD-202ENST00000398568 CPS1P31327 1500 aa17.58■□□□□ 0.41
CYLD-202ENST00000398568 KRT24Q2M2I5 525 aa17.58■□□□□ 0.41
CYLD-202ENST00000398568 TULP4Q9NRJ4 1543 aa17.58■□□□□ 0.41
CYLD-202ENST00000398568 NPHP3Q7Z494 1330 aa17.58■□□□□ 0.4
CYLD-202ENST00000398568 ZNF622Q969S3 477 aaKnown RBP eCLIP17.58■□□□□ 0.4
CYLD-202ENST00000398568 KNDC1Q76NI1 1749 aa17.58■□□□□ 0.4
CYLD-202ENST00000398568 HMOX1P09601 288 aa17.58■□□□□ 0.4
CYLD-202ENST00000398568 ACTN2P35609 894 aa17.58■□□□□ 0.4
CYLD-202ENST00000398568 LRRN4CLQ8ND94 238 aa17.58■□□□□ 0.4
CYLD-202ENST00000398568 CCDC34Q96HJ3 373 aa17.58■□□□□ 0.4
CYLD-202ENST00000398568 ZRANB1Q9UGI0 708 aa17.58■□□□□ 0.4
CYLD-202ENST00000398568 SNX14Q9Y5W7 946 aa17.58■□□□□ 0.4
CYLD-202ENST00000398568 FBLN1P23142 703 aa17.57■□□□□ 0.4
CYLD-202ENST00000398568 MAGEA9P43362 315 aa17.57■□□□□ 0.4
CYLD-202ENST00000398568 TTC14Q96N46 770 aa17.57■□□□□ 0.4
CYLD-202ENST00000398568 PUS7Q96PZ0 661 aaKnown RBP17.57■□□□□ 0.4
CYLD-202ENST00000398568 SRRTQ9BXP5 876 aaKnown RBP17.57■□□□□ 0.4
CYLD-202ENST00000398568 SH2B1Q9NRF2 756 aaPredicted RBP17.57■□□□□ 0.4
CYLD-202ENST00000398568 KCND1Q9NSA2 647 aa17.57■□□□□ 0.4
CYLD-202ENST00000398568 SYTL4Q96C24 671 aaPredicted RBP17.56■□□□□ 0.4
CYLD-202ENST00000398568 ATG3Q9NT62 314 aa17.56■□□□□ 0.4
CYLD-202ENST00000398568 NALCNQ8IZF0 1738 aa17.56■□□□□ 0.4
CYLD-202ENST00000398568 DTNBO60941 627 aa17.56■□□□□ 0.4
CYLD-202ENST00000398568 MYCNP04198 464 aaPredicted RBP17.56■□□□□ 0.4
CYLD-202ENST00000398568 GNL2Q13823 731 aaKnown RBP17.56■□□□□ 0.4
CYLD-202ENST00000398568 CCDC93Q567U6 631 aa17.56■□□□□ 0.4
CYLD-202ENST00000398568 PSD3Q9NYI0 1048 aa17.56■□□□□ 0.4
CYLD-202ENST00000398568 TFIP11Q9UBB9 837 aaKnown RBP17.56■□□□□ 0.4
CYLD-202ENST00000398568 ZNF853P0CG23 659 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 PDCP20941 246 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 BANK1Q8NDB2 785 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 CABLES1Q8TDN4 633 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 PPP1R13BQ96KQ4 1090 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 COL3A1P02461 1466 aaPredicted RBP17.55■□□□□ 0.4
CYLD-202ENST00000398568 URI1O94763 535 aaPredicted RBP17.55■□□□□ 0.4
CYLD-202ENST00000398568 PHACTR3Q96KR7 559 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 ARFGAP3Q9NP61 516 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 DNAI1Q9UI46 699 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 ADAM21Q9UKJ8 722 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 DLC1Q96QB1 1528 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 CCDC158Q5M9N0 1113 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 FAM173BQ6P4H8 233 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 RBM43Q6ZSC3 357 aaKnown RBP17.55■□□□□ 0.4
CYLD-202ENST00000398568 PDRG1Q9NUG6 133 aa17.55■□□□□ 0.4
CYLD-202ENST00000398568 CCP110O43303 1012 aa17.54■□□□□ 0.4
CYLD-202ENST00000398568 CCDC91Q7Z6B0 441 aa17.54■□□□□ 0.4
CYLD-202ENST00000398568 NWD1Q149M9 1564 aa17.54■□□□□ 0.4
CYLD-202ENST00000398568 SLC4A10Q6U841 1118 aa17.54■□□□□ 0.4
CYLD-202ENST00000398568 PSDA5PKW4 1024 aaPredicted RBP17.54■□□□□ 0.4
CYLD-202ENST00000398568 ATP2B1P20020 1258 aa17.54■□□□□ 0.4
CYLD-202ENST00000398568 STX1AQ16623 288 aa17.54■□□□□ 0.4
CYLD-202ENST00000398568 KRT28Q7Z3Y7 464 aa17.54■□□□□ 0.4
CYLD-202ENST00000398568 PPM1EQ8WY54 764 aa17.54■□□□□ 0.4
CYLD-202ENST00000398568 C1orf167Q5SNV9 1468 aa17.53■□□□□ 0.4
CYLD-202ENST00000398568 LARGE1O95461 756 aa17.53■□□□□ 0.4
CYLD-202ENST00000398568 TERF2IPQ9NYB0 399 aa17.53■□□□□ 0.4
CYLD-202ENST00000398568 PLEKHG2Q9H7P9 1386 aa17.53■□□□□ 0.4
CYLD-202ENST00000398568 EFCAB8A8MWE9 144 aa17.53■□□□□ 0.4
CYLD-202ENST00000398568 NR1I2O75469 434 aa17.53■□□□□ 0.4
CYLD-202ENST00000398568 HDGFL2Q7Z4V5 671 aaPredicted RBP17.53■□□□□ 0.4
CYLD-202ENST00000398568 IQUBQ8NA54 791 aa17.53■□□□□ 0.4
CYLD-202ENST00000398568 SMC2O95347 1197 aa17.52■□□□□ 0.4
CYLD-202ENST00000398568 EVCP57679 992 aa17.52■□□□□ 0.4
CYLD-202ENST00000398568 IQCB1Q15051 598 aa17.52■□□□□ 0.4
CYLD-202ENST00000398568 CCDC150Q8NCX0 1101 aa17.52■□□□□ 0.4
CYLD-202ENST00000398568 TBC1D8O95759 1140 aa17.52■□□□□ 0.4
CYLD-202ENST00000398568 SFPQP23246 707 aaKnown RBP eCLIP17.52■□□□□ 0.4
CYLD-202ENST00000398568 E4F1Q66K89 784 aaPredicted RBP17.52■□□□□ 0.4
CYLD-202ENST00000398568 CARD6Q9BX69 1037 aa17.52■□□□□ 0.4
CYLD-202ENST00000398568 UBXN6Q9BZV1 441 aa17.52■□□□□ 0.4
CYLD-202ENST00000398568 MST1RQ04912 1400 aa17.52■□□□□ 0.39
CYLD-202ENST00000398568 NUTM2BA6NNL0 878 aaPredicted RBP17.52■□□□□ 0.39
CYLD-202ENST00000398568 NUTM2EB1AL46 878 aaPredicted RBP17.52■□□□□ 0.39
CYLD-202ENST00000398568 FYB1O15117 783 aa17.52■□□□□ 0.39
CYLD-202ENST00000398568 CPA1P15085 419 aa17.52■□□□□ 0.39
CYLD-202ENST00000398568 ETF1P62495 437 aaKnown RBP17.52■□□□□ 0.39
CYLD-202ENST00000398568 CC2D1AQ6P1N0 951 aaPredicted RBP17.52■□□□□ 0.39
CYLD-202ENST00000398568 PACS2Q86VP3 889 aa17.52■□□□□ 0.39
CYLD-202ENST00000398568 NME9Q86XW9 330 aa17.52■□□□□ 0.39
CYLD-202ENST00000398568 NUTM2AQ8IVF1 878 aaPredicted RBP17.52■□□□□ 0.39
CYLD-202ENST00000398568 DHX8Q14562 1220 aaKnown RBP17.51■□□□□ 0.39
CYLD-202ENST00000398568 SART3Q15020 963 aaKnown RBP17.51■□□□□ 0.39
CYLD-202ENST00000398568 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
CYLD-202ENST00000398568 REXO1L1PQ8IX06 675 aa17.51■□□□□ 0.39
CYLD-202ENST00000398568 IMPACTQ9P2X3 320 aa17.51■□□□□ 0.39
CYLD-202ENST00000398568 RGPD8O14715 1765 aaPredicted RBP17.51■□□□□ 0.39
CYLD-202ENST00000398568 GNAI2P04899 355 aa17.51■□□□□ 0.39
CYLD-202ENST00000398568 LEO1Q8WVC0 666 aaPredicted RBP17.51■□□□□ 0.39
CYLD-202ENST00000398568 HYPKQ9NX55 129 aa17.51■□□□□ 0.39
CYLD-202ENST00000398568 CEP83Q9Y592 693 aa17.51■□□□□ 0.39
CYLD-202ENST00000398568 CYP46A1Q9Y6A2 500 aa17.51■□□□□ 0.39
CYLD-202ENST00000398568 XIRP1Q702N8 1843 aaKnown RBP17.51■□□□□ 0.39
CYLD-202ENST00000398568 TTC21BQ7Z4L5 1316 aa17.51■□□□□ 0.39
CYLD-202ENST00000398568 RASEFQ8IZ41 740 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms