RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ARMC10Q8N2F6 343 aa5.83□□□□□ -1.48
CD47-203ENST00000398258 TPCN2Q8NHX9 752 aa5.83□□□□□ -1.48
CD47-203ENST00000398258 TRPM4Q8TD43 1214 aa5.83□□□□□ -1.48
CD47-203ENST00000398258 RAXQ9Y2V3 346 aa5.83□□□□□ -1.48
CD47-203ENST00000398258 TARSP26639 723 aaKnown RBP5.82□□□□□ -1.48
CD47-203ENST00000398258 DHX32Q7L7V1 743 aaKnown RBP5.82□□□□□ -1.48
CD47-203ENST00000398258 KRT25Q7Z3Z0 450 aa5.82□□□□□ -1.48
CD47-203ENST00000398258 DTX1Q86Y01 620 aa5.82□□□□□ -1.48
CD47-203ENST00000398258 TTC9Q92623 222 aa5.82□□□□□ -1.48
CD47-203ENST00000398258 IFT43Q96FT9 208 aa5.82□□□□□ -1.48
CD47-203ENST00000398258 PNMA5Q96PV4 448 aa5.82□□□□□ -1.48
CD47-203ENST00000398258 SMG9Q9H0W8 520 aaKnown RBP5.82□□□□□ -1.48
CD47-203ENST00000398258 EFCC1Q9HA90 598 aa5.82□□□□□ -1.48
CD47-203ENST00000398258 GTF3C3Q9Y5Q9 886 aa5.82□□□□□ -1.48
CD47-203ENST00000398258 DKK1O94907 266 aa5.81□□□□□ -1.48
CD47-203ENST00000398258 MAP3K6O95382 1288 aa5.81□□□□□ -1.48
CD47-203ENST00000398258 KRTAP1-1Q07627 177 aa5.81□□□□□ -1.48
CD47-203ENST00000398258 SETDB1Q15047 1291 aa5.81□□□□□ -1.48
CD47-203ENST00000398258 ELMSAN1Q6PJG2 1045 aa5.81□□□□□ -1.48
CD47-203ENST00000398258 TSEN2Q8NCE0 465 aaKnown RBP5.81□□□□□ -1.48
CD47-203ENST00000398258 USP17L5A8MUK1 530 aa5.8□□□□□ -1.48
CD47-203ENST00000398258 WISP1O95388 367 aa5.8□□□□□ -1.48
CD47-203ENST00000398258 CCDC102BQ68D86 513 aa5.8□□□□□ -1.48
CD47-203ENST00000398258 GAS2L2Q8NHY3 880 aa5.8□□□□□ -1.48
CD47-203ENST00000398258 NGLY1Q96IV0 654 aa5.8□□□□□ -1.48
CD47-203ENST00000398258 C2orf49Q9BVC5 232 aaPredicted RBP5.8□□□□□ -1.48
CD47-203ENST00000398258 MRPL18Q9H0U6 180 aaKnown RBP5.8□□□□□ -1.48
CD47-203ENST00000398258 ALG2Q9H553 416 aa5.8□□□□□ -1.48
CD47-203ENST00000398258 TM4SF5O14894 197 aa5.79□□□□□ -1.48
CD47-203ENST00000398258 PPP1R12BO60237 982 aaPredicted RBP5.79□□□□□ -1.48
CD47-203ENST00000398258 GLB1P16278 677 aa5.79□□□□□ -1.48
CD47-203ENST00000398258 INPP5BP32019 993 aa5.79□□□□□ -1.48
CD47-203ENST00000398258 GPLD1P80108 840 aa5.79□□□□□ -1.48
CD47-203ENST00000398258 IER5Q5VY09 327 aa5.79□□□□□ -1.48
CD47-203ENST00000398258 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.79□□□□□ -1.48
CD47-203ENST00000398258 NFIAQ12857 509 aa5.78□□□□□ -1.48
CD47-203ENST00000398258 ERICH6Q7L0X2 663 aa5.78□□□□□ -1.48
CD47-203ENST00000398258 GALNT11Q8NCW6 608 aa5.78□□□□□ -1.48
CD47-203ENST00000398258 C7orf69Q9H7B7 122 aa5.78□□□□□ -1.48
CD47-203ENST00000398258 STOML1Q9UBI4 398 aa5.78□□□□□ -1.48
CD47-203ENST00000398258 HMX2A2RU54 273 aa5.77□□□□□ -1.49
CD47-203ENST00000398258 TGFBR3LH3BV60 316 aa5.77□□□□□ -1.49
CD47-203ENST00000398258 J3QW42 95 aa5.77□□□□□ -1.49
CD47-203ENST00000398258 PTCD1O75127 700 aaKnown RBP5.77□□□□□ -1.49
CD47-203ENST00000398258 SASH3O75995 380 aa5.77□□□□□ -1.49
CD47-203ENST00000398258 HOXA10P31260 410 aaPredicted RBP5.77□□□□□ -1.49
CD47-203ENST00000398258 SOX11P35716 441 aa5.77□□□□□ -1.49
CD47-203ENST00000398258 WASHC4Q2M389 1173 aa5.77□□□□□ -1.49
CD47-203ENST00000398258 NFXL1Q6ZNB6 911 aa5.77□□□□□ -1.49
CD47-203ENST00000398258 TRIM42Q8IWZ5 723 aa5.77□□□□□ -1.49
CD47-203ENST00000398258 ABI1Q8IZP0 508 aa5.77□□□□□ -1.49
CD47-203ENST00000398258 NFATC2IPQ8NCF5 419 aa5.77□□□□□ -1.49
CD47-203ENST00000398258 COL26A1Q96A83 441 aa5.77□□□□□ -1.49
CD47-203ENST00000398258 KCNK4Q9NYG8 393 aa5.77□□□□□ -1.49
CD47-203ENST00000398258 LZTS3O60299 673 aaPredicted RBP5.76□□□□□ -1.49
CD47-203ENST00000398258 GDF6Q6KF10 455 aaPredicted RBP5.76□□□□□ -1.49
CD47-203ENST00000398258 ADAMTSL4Q6UY14 1074 aa5.76□□□□□ -1.49
CD47-203ENST00000398258 POU5F2Q8N7G0 328 aa5.76□□□□□ -1.49
CD47-203ENST00000398258 USP20Q9Y2K6 914 aa5.76□□□□□ -1.49
CD47-203ENST00000398258 ATAD2Q6PL18 1390 aa5.76□□□□□ -1.49
CD47-203ENST00000398258 M0R2N6 131 aa5.75□□□□□ -1.49
CD47-203ENST00000398258 GSC2O15499 205 aa5.75□□□□□ -1.49
CD47-203ENST00000398258 LGR5O75473 907 aa5.75□□□□□ -1.49
CD47-203ENST00000398258 EIF2AK2P19525 551 aaKnown RBP5.75□□□□□ -1.49
CD47-203ENST00000398258 IDH3AP50213 366 aa5.75□□□□□ -1.49
CD47-203ENST00000398258 COL19A1Q14993 1142 aa5.75□□□□□ -1.49
CD47-203ENST00000398258 STAG2Q8N3U4 1231 aa5.75□□□□□ -1.49
CD47-203ENST00000398258 IL22RA1Q8N6P7 574 aa5.75□□□□□ -1.49
CD47-203ENST00000398258 PLD4Q96BZ4 506 aa5.75□□□□□ -1.49
CD47-203ENST00000398258 KLK14Q9P0G3 267 aa5.75□□□□□ -1.49
CD47-203ENST00000398258 TRIM33Q9UPN9 1127 aa5.75□□□□□ -1.49
CD47-203ENST00000398258 WNT11O96014 354 aa5.74□□□□□ -1.49
CD47-203ENST00000398258 RARAP10276 462 aa5.74□□□□□ -1.49
CD47-203ENST00000398258 ADAMTS19Q8TE59 1207 aa5.74□□□□□ -1.49
CD47-203ENST00000398258 CHMP7Q8WUX9 453 aaPredicted RBP5.74□□□□□ -1.49
CD47-203ENST00000398258 SCG3Q8WXD2 468 aaKnown RBP5.74□□□□□ -1.49
CD47-203ENST00000398258 PRM3Q9NNZ6 103 aa5.74□□□□□ -1.49
CD47-203ENST00000398258 TIMELESSQ9UNS1 1208 aa5.74□□□□□ -1.49
CD47-203ENST00000398258 CHMP3Q9Y3E7 222 aa5.74□□□□□ -1.49
CD47-203ENST00000398258 NRLP54845 237 aa5.73□□□□□ -1.49
CD47-203ENST00000398258 PCSK7Q16549 785 aa5.73□□□□□ -1.49
CD47-203ENST00000398258 RTN1Q16799 776 aa5.73□□□□□ -1.49
CD47-203ENST00000398258 RNF43Q68DV7 783 aa5.73□□□□□ -1.49
CD47-203ENST00000398258 INTS5Q6P9B9 1019 aaKnown RBP5.73□□□□□ -1.49
CD47-203ENST00000398258 OGFOD1Q8N543 542 aa5.73□□□□□ -1.49
CD47-203ENST00000398258 SHKBP1Q8TBC3 707 aa5.73□□□□□ -1.49
CD47-203ENST00000398258 FAM46AQ96IP4 442 aaKnown RBP5.73□□□□□ -1.49
CD47-203ENST00000398258 UCN2Q96RP3 112 aa5.73□□□□□ -1.49
CD47-203ENST00000398258 USP17L3A6NCW0 530 aa5.72□□□□□ -1.49
CD47-203ENST00000398258 USP17L4A6NCW7 530 aa5.72□□□□□ -1.49
CD47-203ENST00000398258 DHX15O43143 795 aaKnown RBP5.72□□□□□ -1.49
CD47-203ENST00000398258 USP17L2Q6R6M4 530 aa5.72□□□□□ -1.49
CD47-203ENST00000398258 CBLL1Q75N03 491 aa5.72□□□□□ -1.49
CD47-203ENST00000398258 USP17L1Q7RTZ2 530 aa5.72□□□□□ -1.49
CD47-203ENST00000398258 SIX5Q8N196 739 aa5.72□□□□□ -1.49
CD47-203ENST00000398258 DBNDD2Q9BQY9 259 aa5.72□□□□□ -1.49
CD47-203ENST00000398258 TLR7Q9NYK1 1049 aaKnown RBP5.72□□□□□ -1.49
CD47-203ENST00000398258 NCANO14594 1321 aa5.72□□□□□ -1.49
CD47-203ENST00000398258 OPLAHO14841 1288 aa5.71□□□□□ -1.5
CD47-203ENST00000398258 RASA1P20936 1047 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms