RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FKBP5Q13451 457 aaPredicted RBP32.4■■■□□ 2.78
U2AF1-203ENST00000398137 SH3TC1Q8TE82 1336 aa32.4■■■□□ 2.78
U2AF1-203ENST00000398137 ATP5J2-PTCD1G3V325 749 aa32.39■■■□□ 2.78
U2AF1-203ENST00000398137 FZD9O00144 591 aa32.39■■■□□ 2.78
U2AF1-203ENST00000398137 RIC3Q7Z5B4 369 aa32.39■■■□□ 2.78
U2AF1-203ENST00000398137 L3MBTL3Q96JM7 780 aaPredicted RBP32.38■■■□□ 2.77
U2AF1-203ENST00000398137 SCN4AP35499 1836 aa32.37■■■□□ 2.77
U2AF1-203ENST00000398137 POTEIP0CG38 1075 aa32.37■■■□□ 2.77
U2AF1-203ENST00000398137 POTEJP0CG39 1038 aa32.37■■■□□ 2.77
U2AF1-203ENST00000398137 COL4A1P02462 1669 aa32.37■■■□□ 2.77
U2AF1-203ENST00000398137 PI4KAP2A4QPH2 592 aa32.36■■■□□ 2.77
U2AF1-203ENST00000398137 PI4KAP1Q8N8J0 262 aa32.36■■■□□ 2.77
U2AF1-203ENST00000398137 MAP3K2Q9Y2U5 619 aa32.36■■■□□ 2.77
U2AF1-203ENST00000398137 ATP6V0A2Q9Y487 856 aa32.36■■■□□ 2.77
U2AF1-203ENST00000398137 KSR2Q6VAB6 950 aa32.35■■■□□ 2.77
U2AF1-203ENST00000398137 FAM89AQ96GI7 184 aa32.34■■■□□ 2.77
U2AF1-203ENST00000398137 TRIM28Q13263 835 aaKnown RBP32.33■■■□□ 2.77
U2AF1-203ENST00000398137 BCAR3O75815 825 aa32.32■■■□□ 2.76
U2AF1-203ENST00000398137 GRIPAP1Q4V328 841 aa32.32■■■□□ 2.76
U2AF1-203ENST00000398137 LRRC37AA6NMS7 1700 aa32.3■■■□□ 2.76
U2AF1-203ENST00000398137 F6X3S4 739 aa32.3■■■□□ 2.76
U2AF1-203ENST00000398137 BRPF1P55201 1214 aaPredicted RBP32.3■■■□□ 2.76
U2AF1-203ENST00000398137 MYD88Q99836 296 aa32.3■■■□□ 2.76
U2AF1-203ENST00000398137 METTL22Q9BUU2 404 aaPredicted RBP32.3■■■□□ 2.76
U2AF1-203ENST00000398137 TAF1DQ9H5J8 278 aaPredicted RBP32.3■■■□□ 2.76
U2AF1-203ENST00000398137 ADAMTSL1Q8N6G6 1762 aa32.3■■■□□ 2.76
U2AF1-203ENST00000398137 PTPRCP08575 1304 aa32.29■■■□□ 2.76
U2AF1-203ENST00000398137 KIF16BQ96L93 1317 aa32.29■■■□□ 2.76
U2AF1-203ENST00000398137 LTBP1Q14766 1721 aa32.29■■■□□ 2.76
U2AF1-203ENST00000398137 BBOX1O75936 387 aa32.29■■■□□ 2.76
U2AF1-203ENST00000398137 DNAAF4Q8WXU2 420 aa32.29■■■□□ 2.76
U2AF1-203ENST00000398137 GRAPQ13588 217 aa32.28■■■□□ 2.76
U2AF1-203ENST00000398137 RTL5Q5HYW3 569 aaPredicted RBP32.28■■■□□ 2.76
U2AF1-203ENST00000398137 SP8Q8IXZ3 490 aa32.28■■■□□ 2.76
U2AF1-203ENST00000398137 GRAPLQ8TC17 118 aaPredicted RBP32.28■■■□□ 2.76
U2AF1-203ENST00000398137 RTFDC1Q9BY42 306 aaPredicted RBP32.28■■■□□ 2.76
U2AF1-203ENST00000398137 NOB1Q9ULX3 412 aaKnown RBP32.28■■■□□ 2.76
U2AF1-203ENST00000398137 DUOX1Q9NRD9 1551 aa32.28■■■□□ 2.76
U2AF1-203ENST00000398137 SF3B3Q15393 1217 aaKnown RBP32.27■■■□□ 2.76
U2AF1-203ENST00000398137 DDX46Q7L014 1031 aaKnown RBP32.27■■■□□ 2.76
U2AF1-203ENST00000398137 IQCA1LA6NCM1 817 aa32.26■■■□□ 2.75
U2AF1-203ENST00000398137 LARGE2Q8N3Y3 721 aa32.26■■■□□ 2.75
U2AF1-203ENST00000398137 JDP2Q8WYK2 163 aa32.26■■■□□ 2.75
U2AF1-203ENST00000398137 RCAN3Q9UKA8 241 aa32.26■■■□□ 2.75
U2AF1-203ENST00000398137 CHADLQ6NUI6 762 aa32.25■■■□□ 2.75
U2AF1-203ENST00000398137 GPC2Q8N158 579 aa32.25■■■□□ 2.75
U2AF1-203ENST00000398137 NEXNQ0ZGT2 675 aa32.24■■■□□ 2.75
U2AF1-203ENST00000398137 AOC3Q16853 763 aa32.24■■■□□ 2.75
U2AF1-203ENST00000398137 CELF1Q92879 486 aaKnown RBP32.24■■■□□ 2.75
U2AF1-203ENST00000398137 KLRG1Q96E93 195 aa32.24■■■□□ 2.75
U2AF1-203ENST00000398137 IRS4O14654 1257 aaPredicted RBP32.23■■■□□ 2.75
U2AF1-203ENST00000398137 FRAT1Q92837 279 aaPredicted RBP32.23■■■□□ 2.75
U2AF1-203ENST00000398137 PPIP5K2O43314 1243 aa32.22■■■□□ 2.75
U2AF1-203ENST00000398137 IGKV5-2P06315 115 aa32.22■■■□□ 2.75
U2AF1-203ENST00000398137 SLC4A10Q6U841 1118 aa32.22■■■□□ 2.75
U2AF1-203ENST00000398137 ZBTB38Q8NAP3 1195 aaPredicted RBP32.22■■■□□ 2.75
U2AF1-203ENST00000398137 HACL1Q9UJ83 578 aa32.22■■■□□ 2.75
U2AF1-203ENST00000398137 EPHX2P34913 555 aa32.2■■■□□ 2.75
U2AF1-203ENST00000398137 EIF6P56537 245 aaKnown RBP32.2■■■□□ 2.75
U2AF1-203ENST00000398137 CWF19L2Q2TBE0 894 aaKnown RBP32.2■■■□□ 2.75
U2AF1-203ENST00000398137 LDHDQ86WU2 507 aa32.2■■■□□ 2.75
U2AF1-203ENST00000398137 MPNDQ8N594 471 aa32.2■■■□□ 2.75
U2AF1-203ENST00000398137 CCDC191Q8NCU4 936 aa32.2■■■□□ 2.75
U2AF1-203ENST00000398137 DPP8Q6V1X1 898 aaPredicted RBP32.19■■■□□ 2.74
U2AF1-203ENST00000398137 JARID2Q92833 1246 aaPredicted RBP32.19■■■□□ 2.74
U2AF1-203ENST00000398137 API5Q9BZZ5 524 aaKnown RBP32.19■■■□□ 2.74
U2AF1-203ENST00000398137 VPS33BQ9H267 617 aa32.19■■■□□ 2.74
U2AF1-203ENST00000398137 NEURL1BA8MQ27 555 aa32.18■■■□□ 2.74
U2AF1-203ENST00000398137 SCNN1DP51172 638 aa32.18■■■□□ 2.74
U2AF1-203ENST00000398137 NIM1KQ8IY84 436 aa32.18■■■□□ 2.74
U2AF1-203ENST00000398137 LINS1Q8NG48 757 aa32.18■■■□□ 2.74
U2AF1-203ENST00000398137 CWC25Q9NXE8 425 aaPredicted RBP32.18■■■□□ 2.74
U2AF1-203ENST00000398137 GJA3Q9Y6H8 435 aa32.18■■■□□ 2.74
U2AF1-203ENST00000398137 IPO8O15397 1037 aaKnown RBP32.17■■■□□ 2.74
U2AF1-203ENST00000398137 BEND3Q5T5X7 828 aa32.17■■■□□ 2.74
U2AF1-203ENST00000398137 JMYQ8N9B5 988 aa32.17■■■□□ 2.74
U2AF1-203ENST00000398137 ARHGAP45Q92619 1136 aa32.17■■■□□ 2.74
U2AF1-203ENST00000398137 TMX4Q9H1E5 349 aaPredicted RBP32.17■■■□□ 2.74
U2AF1-203ENST00000398137 PASKQ96RG2 1323 aa32.17■■■□□ 2.74
U2AF1-203ENST00000398137 PCNTO95613 3336 aa32.16■■■□□ 2.74
U2AF1-203ENST00000398137 PCCAP05165 728 aaPredicted RBP32.16■■■□□ 2.74
U2AF1-203ENST00000398137 KIAA2012Q0VF49 1180 aa32.16■■■□□ 2.74
U2AF1-203ENST00000398137 EAPPQ56P03 285 aaPredicted RBP32.16■■■□□ 2.74
U2AF1-203ENST00000398137 TMC4Q7Z404 712 aa32.16■■■□□ 2.74
U2AF1-203ENST00000398137 SUPT20HQ8NEM7 779 aa32.16■■■□□ 2.74
U2AF1-203ENST00000398137 TNNQ9UQP3 1299 aa32.16■■■□□ 2.74
U2AF1-203ENST00000398137 ITGBL1O95965 494 aaPredicted RBP32.15■■■□□ 2.74
U2AF1-203ENST00000398137 TRIM27P14373 513 aa32.15■■■□□ 2.74
U2AF1-203ENST00000398137 ZKSCAN2Q63HK3 967 aa32.15■■■□□ 2.74
U2AF1-203ENST00000398137 ATF7IPQ6VMQ6 1270 aa32.15■■■□□ 2.74
U2AF1-203ENST00000398137 CXCL9Q07325 125 aa32.14■■■□□ 2.74
U2AF1-203ENST00000398137 SEC31BQ9NQW1 1179 aa32.14■■■□□ 2.74
U2AF1-203ENST00000398137 EPS15P42566 896 aa32.13■■■□□ 2.73
U2AF1-203ENST00000398137 SRCIN1Q9C0H9 1055 aa32.13■■■□□ 2.73
U2AF1-203ENST00000398137 ZNRF3Q9ULT6 936 aa32.13■■■□□ 2.73
U2AF1-203ENST00000398137 YDJCA8MPS7 323 aa32.11■■■□□ 2.73
U2AF1-203ENST00000398137 GPSM2P81274 684 aa32.11■■■□□ 2.73
U2AF1-203ENST00000398137 GCKRQ14397 625 aa32.11■■■□□ 2.73
U2AF1-203ENST00000398137 CLUAP1Q96AJ1 413 aa32.11■■■□□ 2.73
U2AF1-203ENST00000398137 PDE8AO60658 829 aa32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms