RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 CCT2P78371 535 aaKnown RBP16.26■□□□□ 0.19
COL6A2-203ENST00000397763 IFFO2Q5TF58 517 aa16.26■□□□□ 0.19
COL6A2-203ENST00000397763 DDX46Q7L014 1031 aaKnown RBP16.26■□□□□ 0.19
COL6A2-203ENST00000397763 GOLGA6L6A8MZA4 724 aa16.26■□□□□ 0.19
COL6A2-203ENST00000397763 C1orf141Q5JVX7 400 aa16.26■□□□□ 0.19
COL6A2-203ENST00000397763 UTP14CQ5TAP6 766 aaKnown RBP16.26■□□□□ 0.19
COL6A2-203ENST00000397763 CACTINQ8WUQ7 758 aaKnown RBP16.26■□□□□ 0.19
COL6A2-203ENST00000397763 FMN2Q9NZ56 1722 aa16.26■□□□□ 0.19
COL6A2-203ENST00000397763 PSME1Q06323 249 aa16.25■□□□□ 0.19
COL6A2-203ENST00000397763 Q6ZUG5 572 aa16.25■□□□□ 0.19
COL6A2-203ENST00000397763 FILIP1Q7Z7B0 1213 aa16.25■□□□□ 0.19
COL6A2-203ENST00000397763 TM6SF1Q9BZW5 370 aa16.25■□□□□ 0.19
COL6A2-203ENST00000397763 TRMT1Q9NXH9 659 aaKnown RBP16.25■□□□□ 0.19
COL6A2-203ENST00000397763 ATP5J2-PTCD1G3V325 749 aa16.25■□□□□ 0.19
COL6A2-203ENST00000397763 PTCD1O75127 700 aaKnown RBP16.25■□□□□ 0.19
COL6A2-203ENST00000397763 USP27XA6NNY8 438 aa16.25■□□□□ 0.19
COL6A2-203ENST00000397763 PSMA5P28066 241 aa16.25■□□□□ 0.19
COL6A2-203ENST00000397763 MYD88Q99836 296 aa16.25■□□□□ 0.19
COL6A2-203ENST00000397763 NCOA5Q9HCD5 579 aaKnown RBP16.25■□□□□ 0.19
COL6A2-203ENST00000397763 CGNQ9P2M7 1197 aaKnown RBP16.25■□□□□ 0.19
COL6A2-203ENST00000397763 CLIP2Q9UDT6 1046 aa16.25■□□□□ 0.19
COL6A2-203ENST00000397763 NWD1Q149M9 1564 aa16.24■□□□□ 0.19
COL6A2-203ENST00000397763 PIK3C2AO00443 1686 aa16.24■□□□□ 0.19
COL6A2-203ENST00000397763 IGKV5-2P06315 115 aa16.24■□□□□ 0.19
COL6A2-203ENST00000397763 TNNT1P13805 278 aa16.24■□□□□ 0.19
COL6A2-203ENST00000397763 C11orf57Q6ZUT1 292 aaPredicted RBP16.24■□□□□ 0.19
COL6A2-203ENST00000397763 NALCNQ8IZF0 1738 aa16.24■□□□□ 0.19
COL6A2-203ENST00000397763 RNMTO43148 476 aaKnown RBP16.24■□□□□ 0.19
COL6A2-203ENST00000397763 EPB41L2O43491 1005 aaKnown RBP16.24■□□□□ 0.19
COL6A2-203ENST00000397763 GTF2F1P35269 517 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL6A2-203ENST00000397763 ZNF75DP51815 510 aa16.24■□□□□ 0.19
COL6A2-203ENST00000397763 TPD52L1Q16890 204 aaPredicted RBP16.24■□□□□ 0.19
COL6A2-203ENST00000397763 ZSCAN25Q6NSZ9 544 aa16.24■□□□□ 0.19
COL6A2-203ENST00000397763 RAB11FIP4Q86YS3 637 aa16.24■□□□□ 0.19
COL6A2-203ENST00000397763 IP6K1Q92551 441 aa16.24■□□□□ 0.19
COL6A2-203ENST00000397763 PHF8Q9UPP1 1060 aa16.24■□□□□ 0.19
COL6A2-203ENST00000397763 PLEKHG1Q9ULL1 1385 aa16.24■□□□□ 0.19
COL6A2-203ENST00000397763 CEMIPQ8WUJ3 1361 aa16.23■□□□□ 0.19
COL6A2-203ENST00000397763 AGLP35573 1532 aa16.23■□□□□ 0.19
COL6A2-203ENST00000397763 RNF20Q5VTR2 975 aa16.23■□□□□ 0.19
COL6A2-203ENST00000397763 USP42Q9H9J4 1324 aaKnown RBP16.23■□□□□ 0.19
COL6A2-203ENST00000397763 DIP2BQ9P265 1576 aa16.23■□□□□ 0.19
COL6A2-203ENST00000397763 COL15A1P39059 1388 aa16.23■□□□□ 0.19
COL6A2-203ENST00000397763 TAF5LO75529 589 aa16.23■□□□□ 0.19
COL6A2-203ENST00000397763 TFCP2Q12800 502 aa16.23■□□□□ 0.19
COL6A2-203ENST00000397763 ERC1Q8IUD2 1116 aa16.23■□□□□ 0.19
COL6A2-203ENST00000397763 GTPBP4Q9BZE4 634 aaKnown RBP16.23■□□□□ 0.19
COL6A2-203ENST00000397763 PDCP20941 246 aa16.22■□□□□ 0.19
COL6A2-203ENST00000397763 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
COL6A2-203ENST00000397763 MTX1Q13505 466 aa16.22■□□□□ 0.19
COL6A2-203ENST00000397763 PLEKHO1Q53GL0 409 aaPredicted RBP16.22■□□□□ 0.19
COL6A2-203ENST00000397763 XAGE3Q8WTP9 111 aa16.22■□□□□ 0.19
COL6A2-203ENST00000397763 SCAND2PQ9GZW5 306 aaPredicted RBP16.22■□□□□ 0.19
COL6A2-203ENST00000397763 DBNLQ9UJU6 430 aaKnown RBP16.22■□□□□ 0.19
COL6A2-203ENST00000397763 PXDNLA1KZ92 1463 aa16.22■□□□□ 0.19
COL6A2-203ENST00000397763 AKAP4Q5JQC9 854 aa16.21■□□□□ 0.19
COL6A2-203ENST00000397763 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
COL6A2-203ENST00000397763 COPS6Q7L5N1 327 aa16.21■□□□□ 0.19
COL6A2-203ENST00000397763 DBNDD2Q9BQY9 259 aa16.21■□□□□ 0.19
COL6A2-203ENST00000397763 CLSTN2Q9H4D0 955 aa16.21■□□□□ 0.19
COL6A2-203ENST00000397763 APOBRQ0VD83 1088 aa16.21■□□□□ 0.19
COL6A2-203ENST00000397763 LINS1Q8NG48 757 aa16.21■□□□□ 0.19
COL6A2-203ENST00000397763 NEK1Q96PY6 1258 aa16.21■□□□□ 0.19
COL6A2-203ENST00000397763 NPHP3Q7Z494 1330 aa16.21■□□□□ 0.18
COL6A2-203ENST00000397763 CYP21A2P08686 494 aa16.21■□□□□ 0.18
COL6A2-203ENST00000397763 NCBP1Q09161 790 aaKnown RBP16.21■□□□□ 0.18
COL6A2-203ENST00000397763 UBE3BQ7Z3V4 1068 aa16.21■□□□□ 0.18
COL6A2-203ENST00000397763 KCNB2Q92953 911 aa16.21■□□□□ 0.18
COL6A2-203ENST00000397763 NEUROD6Q96NK8 337 aa16.21■□□□□ 0.18
COL6A2-203ENST00000397763 TOPAZ1Q8N9V7 1692 aa16.21■□□□□ 0.18
COL6A2-203ENST00000397763 NPHP4O75161 1426 aaPredicted RBP16.2■□□□□ 0.18
COL6A2-203ENST00000397763 SCRN1Q12765 414 aa16.2■□□□□ 0.18
COL6A2-203ENST00000397763 FMNL2Q96PY5 1086 aa16.2■□□□□ 0.18
COL6A2-203ENST00000397763 AXIN2Q9Y2T1 843 aa16.2■□□□□ 0.18
COL6A2-203ENST00000397763 PXDNQ92626 1479 aa16.2■□□□□ 0.18
COL6A2-203ENST00000397763 ALDH1L1O75891 902 aa16.2■□□□□ 0.18
COL6A2-203ENST00000397763 ZC3H6P61129 1189 aaKnown RBP16.2■□□□□ 0.18
COL6A2-203ENST00000397763 GOLPH3LQ9H4A5 285 aa16.2■□□□□ 0.18
COL6A2-203ENST00000397763 BABAM1Q9NWV8 329 aa16.2■□□□□ 0.18
COL6A2-203ENST00000397763 TBX22Q9Y458 520 aa16.2■□□□□ 0.18
COL6A2-203ENST00000397763 DIP2AQ14689 1571 aa16.2■□□□□ 0.18
COL6A2-203ENST00000397763 ZBTB22O15209 634 aa16.19■□□□□ 0.18
COL6A2-203ENST00000397763 GPHNQ9NQX3 736 aaPredicted RBP16.19■□□□□ 0.18
COL6A2-203ENST00000397763 GOLGA6L19H0YKK7 550 aa16.19■□□□□ 0.18
COL6A2-203ENST00000397763 ISM2Q6H9L7 571 aa16.19■□□□□ 0.18
COL6A2-203ENST00000397763 STOX1Q6ZVD7 989 aa16.19■□□□□ 0.18
COL6A2-203ENST00000397763 CCAR1Q8IX12 1150 aaKnown RBP16.19■□□□□ 0.18
COL6A2-203ENST00000397763 GTF3C6Q969F1 213 aa16.19■□□□□ 0.18
COL6A2-203ENST00000397763 ORAI2Q96SN7 254 aa16.19■□□□□ 0.18
COL6A2-203ENST00000397763 RESTQ13127 1097 aa16.18■□□□□ 0.18
COL6A2-203ENST00000397763 NFATC2IPQ8NCF5 419 aa16.18■□□□□ 0.18
COL6A2-203ENST00000397763 GJB4Q9NTQ9 266 aa16.18■□□□□ 0.18
COL6A2-203ENST00000397763 DDX19AQ9NUU7 478 aaKnown RBP16.18■□□□□ 0.18
COL6A2-203ENST00000397763 UBR1Q8IWV7 1749 aa16.18■□□□□ 0.18
COL6A2-203ENST00000397763 PTPN21Q16825 1174 aa16.18■□□□□ 0.18
COL6A2-203ENST00000397763 ANKRD24Q8TF21 1146 aa16.18■□□□□ 0.18
COL6A2-203ENST00000397763 BBXQ8WY36 941 aaPredicted RBP16.18■□□□□ 0.18
COL6A2-203ENST00000397763 BECN2A8MW95 431 aa16.17■□□□□ 0.18
COL6A2-203ENST00000397763 KIF20AO95235 890 aa16.17■□□□□ 0.18
COL6A2-203ENST00000397763 PDIA6Q15084 440 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms