RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 VAT1LQ9HCJ6 419 aa18.07■□□□□ 0.48
LSS-202ENST00000397728 PRPF40AO75400 957 aaKnown RBP18.07■□□□□ 0.48
LSS-202ENST00000397728 BMP2KLQ5H9B9 411 aa18.07■□□□□ 0.48
LSS-202ENST00000397728 ZNF594Q96JF6 807 aaPredicted RBP18.07■□□□□ 0.48
LSS-202ENST00000397728 LMOD1P29536 600 aaPredicted RBP18.07■□□□□ 0.48
LSS-202ENST00000397728 TIMM10P62072 90 aa18.07■□□□□ 0.48
LSS-202ENST00000397728 C16orf71Q8IYS4 520 aaPredicted RBP18.07■□□□□ 0.48
LSS-202ENST00000397728 MYCNP04198 464 aaPredicted RBP18.06■□□□□ 0.48
LSS-202ENST00000397728 EPS15P42566 896 aa18.06■□□□□ 0.48
LSS-202ENST00000397728 DPP8Q6V1X1 898 aaPredicted RBP18.06■□□□□ 0.48
LSS-202ENST00000397728 AATKQ6ZMQ8 1374 aa18.06■□□□□ 0.48
LSS-202ENST00000397728 GOLGA8BA8MQT2 603 aa18.06■□□□□ 0.48
LSS-202ENST00000397728 EYA2O00167 538 aa18.06■□□□□ 0.48
LSS-202ENST00000397728 LDHBP07195 334 aaKnown RBP18.06■□□□□ 0.48
LSS-202ENST00000397728 TMEM67Q5HYA8 995 aa18.06■□□□□ 0.48
LSS-202ENST00000397728 LARGE2Q8N3Y3 721 aa18.06■□□□□ 0.48
LSS-202ENST00000397728 PAG1Q9NWQ8 432 aa18.06■□□□□ 0.48
LSS-202ENST00000397728 KRT85P78386 507 aa18.06■□□□□ 0.48
LSS-202ENST00000397728 FERMT3Q86UX7 667 aa18.06■□□□□ 0.48
LSS-202ENST00000397728 TBC1D9Q6ZT07 1266 aa18.06■□□□□ 0.48
LSS-202ENST00000397728 MIGA1Q8NAN2 632 aa18.06■□□□□ 0.48
LSS-202ENST00000397728 LARP6Q9BRS8 491 aaKnown RBP18.06■□□□□ 0.48
LSS-202ENST00000397728 GGA1Q9UJY5 639 aa18.06■□□□□ 0.48
LSS-202ENST00000397728 GOLGA8AA7E2F4 631 aa18.05■□□□□ 0.48
LSS-202ENST00000397728 NUCB1Q02818 461 aa18.05■□□□□ 0.48
LSS-202ENST00000397728 ANKARQ7Z5J8 1434 aa18.05■□□□□ 0.48
LSS-202ENST00000397728 NF2P35240 595 aa18.05■□□□□ 0.48
LSS-202ENST00000397728 CCT2P78371 535 aaKnown RBP18.05■□□□□ 0.48
LSS-202ENST00000397728 GCKRQ14397 625 aa18.05■□□□□ 0.48
LSS-202ENST00000397728 KAT14Q9H8E8 782 aa18.05■□□□□ 0.48
LSS-202ENST00000397728 WWC2Q6AWC2 1192 aa18.05■□□□□ 0.48
LSS-202ENST00000397728 TTLL7Q6ZT98 887 aa18.05■□□□□ 0.48
LSS-202ENST00000397728 CCDC144CPQ8IYA2 1237 aa18.05■□□□□ 0.48
LSS-202ENST00000397728 IGSF1Q8N6C5 1336 aa18.05■□□□□ 0.48
LSS-202ENST00000397728 SDSP20132 328 aa18.04■□□□□ 0.48
LSS-202ENST00000397728 TCIRG1Q13488 830 aa18.04■□□□□ 0.48
LSS-202ENST00000397728 CDC42BPBQ9Y5S2 1711 aa18.04■□□□□ 0.48
LSS-202ENST00000397728 MICU3Q86XE3 530 aa18.04■□□□□ 0.48
LSS-202ENST00000397728 BCS1LQ9Y276 419 aa18.04■□□□□ 0.48
LSS-202ENST00000397728 TAF5LO75529 589 aa18.04■□□□□ 0.48
LSS-202ENST00000397728 RAB11FIP4Q86YS3 637 aa18.04■□□□□ 0.48
LSS-202ENST00000397728 NBPF7P0C2Y1 421 aaPredicted RBP18.03■□□□□ 0.48
LSS-202ENST00000397728 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
LSS-202ENST00000397728 NCOA7Q8NI08 942 aa18.03■□□□□ 0.48
LSS-202ENST00000397728 HIBADHP31937 336 aaKnown RBP18.03■□□□□ 0.48
LSS-202ENST00000397728 CRKLP46109 303 aaKnown RBP18.03■□□□□ 0.48
LSS-202ENST00000397728 ZBTB40Q9NUA8 1239 aa18.03■□□□□ 0.48
LSS-202ENST00000397728 MAGEB6P1A0A0J9YX57 407 aa18.03■□□□□ 0.48
LSS-202ENST00000397728 TSPY3P0CV98 308 aa18.03■□□□□ 0.48
LSS-202ENST00000397728 TSPY8P0CW00 308 aa18.03■□□□□ 0.48
LSS-202ENST00000397728 GPR162Q16538 588 aa18.03■□□□□ 0.48
LSS-202ENST00000397728 MAGEB6Q8N7X4 407 aa18.03■□□□□ 0.48
LSS-202ENST00000397728 A0A1B0GUL7 405 aa18.02■□□□□ 0.48
LSS-202ENST00000397728 RTL1A6NKG5 1358 aa18.02■□□□□ 0.48
LSS-202ENST00000397728 IQGAP3Q86VI3 1631 aa18.02■□□□□ 0.48
LSS-202ENST00000397728 GUCY1B3Q02153 619 aa18.02■□□□□ 0.47
LSS-202ENST00000397728 CUL5Q93034 780 aa18.02■□□□□ 0.47
LSS-202ENST00000397728 NAT10Q9H0A0 1025 aaKnown RBP18.02■□□□□ 0.47
LSS-202ENST00000397728 DCTPP1Q9H773 170 aa18.02■□□□□ 0.47
LSS-202ENST00000397728 MCM9Q9NXL9 1143 aa18.02■□□□□ 0.47
LSS-202ENST00000397728 FAM13BQ9NYF5 915 aa18.02■□□□□ 0.47
LSS-202ENST00000397728 SYNMO15061 1565 aa18.01■□□□□ 0.47
LSS-202ENST00000397728 IBSPP21815 317 aaPredicted RBP18.01■□□□□ 0.47
LSS-202ENST00000397728 MCMDC2Q4G0Z9 681 aa18.01■□□□□ 0.47
LSS-202ENST00000397728 NLGN1Q8N2Q7 840 aa18.01■□□□□ 0.47
LSS-202ENST00000397728 SUCLG2Q96I99 432 aa18.01■□□□□ 0.47
LSS-202ENST00000397728 NEK1Q96PY6 1258 aa18.01■□□□□ 0.47
LSS-202ENST00000397728 ZBTB1Q9Y2K1 713 aa18.01■□□□□ 0.47
LSS-202ENST00000397728 PPFIA3O75145 1194 aa18.01■□□□□ 0.47
LSS-202ENST00000397728 RNF17Q9BXT8 1623 aaKnown RBP18.01■□□□□ 0.47
LSS-202ENST00000397728 PLCG2P16885 1265 aa18.01■□□□□ 0.47
LSS-202ENST00000397728 KIF5BP33176 963 aa18.01■□□□□ 0.47
LSS-202ENST00000397728 C8orf76Q96K31 380 aa18.01■□□□□ 0.47
LSS-202ENST00000397728 PUM3Q15397 648 aaKnown RBP18.01■□□□□ 0.47
LSS-202ENST00000397728 OFD1O75665 1012 aa18■□□□□ 0.47
LSS-202ENST00000397728 MBD3O95983 291 aa18■□□□□ 0.47
LSS-202ENST00000397728 CAVIN1Q6NZI2 390 aaKnown RBP18■□□□□ 0.47
LSS-202ENST00000397728 HOMER1Q86YM7 354 aa18■□□□□ 0.47
LSS-202ENST00000397728 BMP2KQ9NSY1 1161 aaPredicted RBP18■□□□□ 0.47
LSS-202ENST00000397728 SPATA32Q96LK8 384 aa18■□□□□ 0.47
LSS-202ENST00000397728 CLTCL1P53675 1640 aa18■□□□□ 0.47
LSS-202ENST00000397728 ALDH1B1P30837 517 aa18■□□□□ 0.47
LSS-202ENST00000397728 RPS8P62241 208 aaKnown RBP18■□□□□ 0.47
LSS-202ENST00000397728 RNF214Q8ND24 703 aa18■□□□□ 0.47
LSS-202ENST00000397728 ESR2Q92731 530 aa18■□□□□ 0.47
LSS-202ENST00000397728 DENND2AQ9ULE3 1009 aa18■□□□□ 0.47
LSS-202ENST00000397728 PDE6BP35913 854 aa17.99■□□□□ 0.47
LSS-202ENST00000397728 EIF6P56537 245 aaKnown RBP17.99■□□□□ 0.47
LSS-202ENST00000397728 NLRP5P59047 1200 aa17.99■□□□□ 0.47
LSS-202ENST00000397728 TNIP1Q15025 636 aa17.99■□□□□ 0.47
LSS-202ENST00000397728 CFAP45Q9UL16 551 aa17.99■□□□□ 0.47
LSS-202ENST00000397728 ZBTB7BO15156 539 aaPredicted RBP17.99■□□□□ 0.47
LSS-202ENST00000397728 DIP2CQ9Y2E4 1556 aa17.99■□□□□ 0.47
LSS-202ENST00000397728 SH2B1Q9NRF2 756 aaPredicted RBP17.99■□□□□ 0.47
LSS-202ENST00000397728 LIMCH1Q9UPQ0 1083 aa17.99■□□□□ 0.47
LSS-202ENST00000397728 THRAP3Q9Y2W1 955 aaKnown RBP17.99■□□□□ 0.47
LSS-202ENST00000397728 AXIN2Q9Y2T1 843 aa17.98■□□□□ 0.47
LSS-202ENST00000397728 PTPRMP28827 1452 aa17.98■□□□□ 0.47
LSS-202ENST00000397728 HSPA1LP34931 641 aa17.98■□□□□ 0.47
LSS-202ENST00000397728 SSRP1Q08945 709 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms