RNA–Protein interactions for RNA: ENST00000397010.6

PPARG-205, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-205ENST00000397010 PDE8AO60658 829 aa17.4■□□□□ 0.38
PPARG-205ENST00000397010 NYXQ9GZU5 481 aa17.4■□□□□ 0.38
PPARG-205ENST00000397010 COL4A1P02462 1669 aa17.39■□□□□ 0.37
PPARG-205ENST00000397010 SURF6O75683 361 aaKnown RBP17.39■□□□□ 0.37
PPARG-205ENST00000397010 TM4SF1P30408 202 aa17.39■□□□□ 0.37
PPARG-205ENST00000397010 TTLL11Q8NHH1 800 aa17.39■□□□□ 0.37
PPARG-205ENST00000397010 SIL1Q9H173 461 aa17.39■□□□□ 0.37
PPARG-205ENST00000397010 RFX5P48382 616 aaPredicted RBP17.38■□□□□ 0.37
PPARG-205ENST00000397010 ANKRD45Q5TZF3 282 aa17.38■□□□□ 0.37
PPARG-205ENST00000397010 TPTE2Q6XPS3 522 aa17.38■□□□□ 0.37
PPARG-205ENST00000397010 C3orf67Q6ZVT6 689 aa17.38■□□□□ 0.37
PPARG-205ENST00000397010 GREM2Q9H772 168 aa17.38■□□□□ 0.37
PPARG-205ENST00000397010 POLRMTO00411 1230 aaKnown RBP17.38■□□□□ 0.37
PPARG-205ENST00000397010 CNBD1Q8NA66 436 aa17.38■□□□□ 0.37
PPARG-205ENST00000397010 LNPKQ9C0E8 428 aa17.38■□□□□ 0.37
PPARG-205ENST00000397010 SMARCA5O60264 1052 aaPredicted RBP17.37■□□□□ 0.37
PPARG-205ENST00000397010 SERPINB2P05120 415 aa17.37■□□□□ 0.37
PPARG-205ENST00000397010 CSF1RP07333 972 aa17.37■□□□□ 0.37
PPARG-205ENST00000397010 PTPN12Q05209 780 aaKnown RBP17.37■□□□□ 0.37
PPARG-205ENST00000397010 PRR5LQ6MZQ0 368 aa17.37■□□□□ 0.37
PPARG-205ENST00000397010 NLGN1Q8N2Q7 840 aa17.37■□□□□ 0.37
PPARG-205ENST00000397010 ZNF594Q96JF6 807 aaPredicted RBP17.37■□□□□ 0.37
PPARG-205ENST00000397010 NUCB1Q02818 461 aa17.37■□□□□ 0.37
PPARG-205ENST00000397010 MMP10P09238 476 aa17.36■□□□□ 0.37
PPARG-205ENST00000397010 RGS3P49796 1198 aa17.36■□□□□ 0.37
PPARG-205ENST00000397010 ITGA6P23229 1130 aa17.35■□□□□ 0.37
PPARG-205ENST00000397010 OS9Q13438 667 aaPredicted RBP17.35■□□□□ 0.37
PPARG-205ENST00000397010 CCDC57Q2TAC2 916 aa17.35■□□□□ 0.37
PPARG-205ENST00000397010 CHD1LQ86WJ1 897 aa17.35■□□□□ 0.37
PPARG-205ENST00000397010 LRP5O75197 1615 aa17.35■□□□□ 0.37
PPARG-205ENST00000397010 COPRSQ9NQ92 184 aa17.35■□□□□ 0.37
PPARG-205ENST00000397010 NOP58Q9Y2X3 529 aaKnown RBP17.35■□□□□ 0.37
PPARG-205ENST00000397010 CACNA1SQ13698 1873 aa17.34■□□□□ 0.37
PPARG-205ENST00000397010 A0A1B0GUL6 1792 aa17.34■□□□□ 0.37
PPARG-205ENST00000397010 COL11A2P13942 1736 aaPredicted RBP17.34■□□□□ 0.37
PPARG-205ENST00000397010 PDE4AP27815 886 aa17.34■□□□□ 0.37
PPARG-205ENST00000397010 IFIT5Q13325 482 aaKnown RBP17.34■□□□□ 0.37
PPARG-205ENST00000397010 HSP90B1P14625 803 aaKnown RBP17.33■□□□□ 0.37
PPARG-205ENST00000397010 SLC10A5Q5PT55 438 aa17.33■□□□□ 0.37
PPARG-205ENST00000397010 LRRCC1Q9C099 1032 aa17.33■□□□□ 0.37
PPARG-205ENST00000397010 IL1RAPL2Q9NP60 686 aa17.33■□□□□ 0.37
PPARG-205ENST00000397010 SEC31BQ9NQW1 1179 aa17.33■□□□□ 0.37
PPARG-205ENST00000397010 SRCAPQ6ZRS2 3230 aa17.33■□□□□ 0.36
PPARG-205ENST00000397010 R3HDM1Q15032 1099 aaKnown RBP17.33■□□□□ 0.36
PPARG-205ENST00000397010 CCDC152Q4G0S7 254 aa17.33■□□□□ 0.36
PPARG-205ENST00000397010 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.33■□□□□ 0.36
PPARG-205ENST00000397010 ST5P78524 1137 aa17.32■□□□□ 0.36
PPARG-205ENST00000397010 G3BP1Q13283 466 aaKnown RBP eCLIP17.32■□□□□ 0.36
PPARG-205ENST00000397010 TAF7LQ5H9L4 462 aa17.32■□□□□ 0.36
PPARG-205ENST00000397010 PUS3Q9BZE2 481 aaKnown RBP17.32■□□□□ 0.36
PPARG-205ENST00000397010 ANKRD18BA2A2Z9 1011 aa17.31■□□□□ 0.36
PPARG-205ENST00000397010 LRRC24Q50LG9 513 aa17.31■□□□□ 0.36
PPARG-205ENST00000397010 C16orf71Q8IYS4 520 aaPredicted RBP17.31■□□□□ 0.36
PPARG-205ENST00000397010 RHPN1Q8TCX5 695 aa17.31■□□□□ 0.36
PPARG-205ENST00000397010 NLRP3Q96P20 1036 aa17.31■□□□□ 0.36
PPARG-205ENST00000397010 ZBTB47Q9UFB7 747 aaPredicted RBP17.31■□□□□ 0.36
PPARG-205ENST00000397010 PARP3Q9Y6F1 533 aa17.31■□□□□ 0.36
PPARG-205ENST00000397010 RAB11FIP3O75154 756 aa17.31■□□□□ 0.36
PPARG-205ENST00000397010 SASH1O94885 1247 aa17.31■□□□□ 0.36
PPARG-205ENST00000397010 HSP90AB4PQ58FF6 505 aa17.31■□□□□ 0.36
PPARG-205ENST00000397010 OTUD7AQ8TE49 926 aaPredicted RBP17.31■□□□□ 0.36
PPARG-205ENST00000397010 KIF1BPQ96EK5 621 aa17.31■□□□□ 0.36
PPARG-205ENST00000397010 RIC1Q4ADV7 1423 aa17.31■□□□□ 0.36
PPARG-205ENST00000397010 RTL9Q8NET4 1388 aa17.31■□□□□ 0.36
PPARG-205ENST00000397010 PSDA5PKW4 1024 aaPredicted RBP17.3■□□□□ 0.36
PPARG-205ENST00000397010 SF3B3Q15393 1217 aaKnown RBP17.3■□□□□ 0.36
PPARG-205ENST00000397010 ATG9AQ7Z3C6 839 aa17.3■□□□□ 0.36
PPARG-205ENST00000397010 EYA2O00167 538 aa17.29■□□□□ 0.36
PPARG-205ENST00000397010 ZBTB7AO95365 584 aa17.29■□□□□ 0.36
PPARG-205ENST00000397010 ERC1Q8IUD2 1116 aa17.28■□□□□ 0.36
PPARG-205ENST00000397010 TFCP2Q12800 502 aa17.28■□□□□ 0.36
PPARG-205ENST00000397010 LDHAL6AQ6ZMR3 332 aa17.28■□□□□ 0.36
PPARG-205ENST00000397010 CNNM1Q9NRU3 951 aa17.27■□□□□ 0.36
PPARG-205ENST00000397010 CIAO1O76071 339 aa17.26■□□□□ 0.35
PPARG-205ENST00000397010 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
PPARG-205ENST00000397010 CELF1Q92879 486 aaKnown RBP17.26■□□□□ 0.35
PPARG-205ENST00000397010 IL15P40933 162 aaPredicted RBP17.26■□□□□ 0.35
PPARG-205ENST00000397010 AK9Q5TCS8 1911 aa17.25■□□□□ 0.35
PPARG-205ENST00000397010 TSHZ3Q63HK5 1081 aa17.25■□□□□ 0.35
PPARG-205ENST00000397010 CDC5LQ99459 802 aaKnown RBP17.25■□□□□ 0.35
PPARG-205ENST00000397010 MPHOSPH8Q99549 860 aa17.25■□□□□ 0.35
PPARG-205ENST00000397010 IGHMBP2P38935 993 aaKnown RBP17.25■□□□□ 0.35
PPARG-205ENST00000397010 CRY2Q49AN0 593 aa17.25■□□□□ 0.35
PPARG-205ENST00000397010 DDX46Q7L014 1031 aaKnown RBP17.25■□□□□ 0.35
PPARG-205ENST00000397010 AACSQ86V21 672 aa17.25■□□□□ 0.35
PPARG-205ENST00000397010 CLASRPQ8N2M8 674 aaKnown RBP17.25■□□□□ 0.35
PPARG-205ENST00000397010 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
PPARG-205ENST00000397010 RIPOR2Q9Y4F9 1068 aa17.25■□□□□ 0.35
PPARG-205ENST00000397010 KIF13BQ9NQT8 1826 aa17.24■□□□□ 0.35
PPARG-205ENST00000397010 ARAP2Q8WZ64 1704 aa17.24■□□□□ 0.35
PPARG-205ENST00000397010 SLC51AQ86UW1 340 aa17.24■□□□□ 0.35
PPARG-205ENST00000397010 ANKRD18AQ8IVF6 992 aa17.24■□□□□ 0.35
PPARG-205ENST00000397010 PLEKHM2Q8IWE5 1019 aa17.24■□□□□ 0.35
PPARG-205ENST00000397010 RPGRQ92834 1020 aaKnown RBP17.24■□□□□ 0.35
PPARG-205ENST00000397010 EAF2Q96CJ1 260 aaPredicted RBP17.24■□□□□ 0.35
PPARG-205ENST00000397010 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
PPARG-205ENST00000397010 TLR7Q9NYK1 1049 aaKnown RBP17.24■□□□□ 0.35
PPARG-205ENST00000397010 ZNF609O15014 1411 aa17.24■□□□□ 0.35
PPARG-205ENST00000397010 SALL3Q9BXA9 1300 aa17.24■□□□□ 0.35
PPARG-205ENST00000397010 METTL24Q5JXM2 366 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms