RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 GRAPQ13588 217 aa22.53■■□□□ 1.2
TNFSF13-204ENST00000396542 GRAPLQ8TC17 118 aaPredicted RBP22.53■■□□□ 1.2
TNFSF13-204ENST00000396542 API5Q9BZZ5 524 aaKnown RBP22.53■■□□□ 1.2
TNFSF13-204ENST00000396542 CCDC88AQ3V6T2 1871 aa22.53■■□□□ 1.2
TNFSF13-204ENST00000396542 LTBP3Q9NS15 1303 aa22.53■■□□□ 1.2
TNFSF13-204ENST00000396542 GRM8O00222 908 aa22.52■■□□□ 1.2
TNFSF13-204ENST00000396542 PPEF1O14829 653 aaPredicted RBP22.52■■□□□ 1.2
TNFSF13-204ENST00000396542 CCDC93Q567U6 631 aa22.52■■□□□ 1.2
TNFSF13-204ENST00000396542 BBOX1O75936 387 aa22.51■■□□□ 1.19
TNFSF13-204ENST00000396542 YY1P25490 414 aa22.51■■□□□ 1.19
TNFSF13-204ENST00000396542 CTSWP56202 376 aa22.51■■□□□ 1.19
TNFSF13-204ENST00000396542 CCDC152Q4G0S7 254 aa22.51■■□□□ 1.19
TNFSF13-204ENST00000396542 CC2D2BQ6DHV5 1058 aa22.51■■□□□ 1.19
TNFSF13-204ENST00000396542 OLFM4Q6UX06 510 aa22.51■■□□□ 1.19
TNFSF13-204ENST00000396542 UTYO14607 1347 aa22.51■■□□□ 1.19
TNFSF13-204ENST00000396542 RTL9Q8NET4 1388 aa22.5■■□□□ 1.19
TNFSF13-204ENST00000396542 RASSF7Q02833 373 aa22.5■■□□□ 1.19
TNFSF13-204ENST00000396542 TTLL11Q8NHH1 800 aa22.5■■□□□ 1.19
TNFSF13-204ENST00000396542 DICER1Q9UPY3 1922 aaKnown RBP22.5■■□□□ 1.19
TNFSF13-204ENST00000396542 PRELPP51888 382 aa22.49■■□□□ 1.19
TNFSF13-204ENST00000396542 RTKN2Q8IZC4 609 aa22.49■■□□□ 1.19
TNFSF13-204ENST00000396542 CELF1Q92879 486 aaKnown RBP22.49■■□□□ 1.19
TNFSF13-204ENST00000396542 C9orf78Q9NZ63 289 aaPredicted RBP22.49■■□□□ 1.19
TNFSF13-204ENST00000396542 ATP6V0A2Q9Y487 856 aa22.49■■□□□ 1.19
TNFSF13-204ENST00000396542 IPO8O15397 1037 aaKnown RBP22.48■■□□□ 1.19
TNFSF13-204ENST00000396542 CSF1RP07333 972 aa22.48■■□□□ 1.19
TNFSF13-204ENST00000396542 CCT4P50991 539 aaKnown RBP22.48■■□□□ 1.19
TNFSF13-204ENST00000396542 GRIPAP1Q4V328 841 aa22.48■■□□□ 1.19
TNFSF13-204ENST00000396542 TMC4Q7Z404 712 aa22.48■■□□□ 1.19
TNFSF13-204ENST00000396542 SLC51AQ86UW1 340 aa22.48■■□□□ 1.19
TNFSF13-204ENST00000396542 TAOK3Q9H2K8 898 aa22.48■■□□□ 1.19
TNFSF13-204ENST00000396542 LMNB1P20700 586 aa22.47■■□□□ 1.19
TNFSF13-204ENST00000396542 SP8Q8IXZ3 490 aa22.47■■□□□ 1.19
TNFSF13-204ENST00000396542 SEC31BQ9NQW1 1179 aa22.47■■□□□ 1.19
TNFSF13-204ENST00000396542 TIAM2Q8IVF5 1701 aa22.47■■□□□ 1.19
TNFSF13-204ENST00000396542 LTBP1Q14766 1721 aa22.46■■□□□ 1.19
TNFSF13-204ENST00000396542 NBPF7P0C2Y1 421 aaPredicted RBP22.46■■□□□ 1.19
TNFSF13-204ENST00000396542 TRIM27P14373 513 aa22.46■■□□□ 1.19
TNFSF13-204ENST00000396542 FOXO4P98177 505 aa22.46■■□□□ 1.19
TNFSF13-204ENST00000396542 FKBP4Q02790 459 aaKnown RBP eCLIP22.46■■□□□ 1.19
TNFSF13-204ENST00000396542 C9orf131Q5VYM1 1079 aa22.46■■□□□ 1.19
TNFSF13-204ENST00000396542 ATF7IPQ6VMQ6 1270 aa22.46■■□□□ 1.19
TNFSF13-204ENST00000396542 CCDC85AQ96PX6 553 aaPredicted RBP22.46■■□□□ 1.19
TNFSF13-204ENST00000396542 SPEF2Q9C093 1822 aa22.45■■□□□ 1.19
TNFSF13-204ENST00000396542 RPS8P62241 208 aaKnown RBP22.45■■□□□ 1.18
TNFSF13-204ENST00000396542 FRAT1Q92837 279 aaPredicted RBP22.45■■□□□ 1.18
TNFSF13-204ENST00000396542 PSMD1Q99460 953 aa22.45■■□□□ 1.18
TNFSF13-204ENST00000396542 USP44Q9H0E7 712 aa22.45■■□□□ 1.18
TNFSF13-204ENST00000396542 GREM2Q9H772 168 aa22.45■■□□□ 1.18
TNFSF13-204ENST00000396542 EPHA10Q5JZY3 1008 aa22.44■■□□□ 1.18
TNFSF13-204ENST00000396542 INTS3Q68E01 1043 aaKnown RBP22.44■■□□□ 1.18
TNFSF13-204ENST00000396542 KAZALD1Q96I82 304 aa22.44■■□□□ 1.18
TNFSF13-204ENST00000396542 RNF181Q9P0P0 153 aa22.44■■□□□ 1.18
TNFSF13-204ENST00000396542 DUOX1Q9NRD9 1551 aa22.43■■□□□ 1.18
TNFSF13-204ENST00000396542 ZKSCAN2Q63HK3 967 aa22.43■■□□□ 1.18
TNFSF13-204ENST00000396542 SUCLG2Q96I99 432 aa22.42■■□□□ 1.18
TNFSF13-204ENST00000396542 YTHDC1Q96MU7 727 aaKnown RBP22.42■■□□□ 1.18
TNFSF13-204ENST00000396542 TMX4Q9H1E5 349 aaPredicted RBP22.42■■□□□ 1.18
TNFSF13-204ENST00000396542 TNNQ9UQP3 1299 aa22.42■■□□□ 1.18
TNFSF13-204ENST00000396542 ZC3H4Q9UPT8 1303 aaKnown RBP22.41■■□□□ 1.18
TNFSF13-204ENST00000396542 FAM161AQ3B820 660 aa22.41■■□□□ 1.18
TNFSF13-204ENST00000396542 CDC5LQ99459 802 aaKnown RBP22.41■■□□□ 1.18
TNFSF13-204ENST00000396542 RTFDC1Q9BY42 306 aaPredicted RBP22.41■■□□□ 1.18
TNFSF13-204ENST00000396542 ITGA6P23229 1130 aa22.4■■□□□ 1.18
TNFSF13-204ENST00000396542 LMBR1LQ6UX01 489 aa22.4■■□□□ 1.18
TNFSF13-204ENST00000396542 ANKRD18AQ8IVF6 992 aa22.4■■□□□ 1.18
TNFSF13-204ENST00000396542 RABL6Q3YEC7 729 aaPredicted RBP22.39■■□□□ 1.17
TNFSF13-204ENST00000396542 MPNDQ8N594 471 aa22.39■■□□□ 1.17
TNFSF13-204ENST00000396542 ZNF277Q9NRM2 450 aaPredicted RBP22.39■■□□□ 1.17
TNFSF13-204ENST00000396542 RCAN3Q9UKA8 241 aa22.39■■□□□ 1.17
TNFSF13-204ENST00000396542 DPP8Q6V1X1 898 aaPredicted RBP22.38■■□□□ 1.17
TNFSF13-204ENST00000396542 ZNF784Q8NCA9 323 aaPredicted RBP22.38■■□□□ 1.17
TNFSF13-204ENST00000396542 CLUAP1Q96AJ1 413 aa22.38■■□□□ 1.17
TNFSF13-204ENST00000396542 BSDC1Q9NW68 430 aaPredicted RBP22.38■■□□□ 1.17
TNFSF13-204ENST00000396542 COL4A5P29400 1685 aa22.37■■□□□ 1.17
TNFSF13-204ENST00000396542 IARSP41252 1262 aaKnown RBP22.37■■□□□ 1.17
TNFSF13-204ENST00000396542 ANKRD44Q8N8A2 993 aa22.37■■□□□ 1.17
TNFSF13-204ENST00000396542 BICC1Q9H694 974 aaKnown RBP22.37■■□□□ 1.17
TNFSF13-204ENST00000396542 A0A1B0GUL6 1792 aa22.37■■□□□ 1.17
TNFSF13-204ENST00000396542 ANKRD18BA2A2Z9 1011 aa22.36■■□□□ 1.17
TNFSF13-204ENST00000396542 GPSM2P81274 684 aa22.36■■□□□ 1.17
TNFSF13-204ENST00000396542 IFIT5Q13325 482 aaKnown RBP22.36■■□□□ 1.17
TNFSF13-204ENST00000396542 SUPT20HQ8NEM7 779 aa22.36■■□□□ 1.17
TNFSF13-204ENST00000396542 VPS33BQ9H267 617 aa22.36■■□□□ 1.17
TNFSF13-204ENST00000396542 PODXL2Q9NZ53 605 aa22.36■■□□□ 1.17
TNFSF13-204ENST00000396542 UBTFL1P0CB47 393 aaPredicted RBP22.35■■□□□ 1.17
TNFSF13-204ENST00000396542 TMEM57Q8N5G2 664 aa22.35■■□□□ 1.17
TNFSF13-204ENST00000396542 MEIS3Q99687 375 aa22.35■■□□□ 1.17
TNFSF13-204ENST00000396542 NSFL1CQ9UNZ2 370 aaKnown RBP22.35■■□□□ 1.17
TNFSF13-204ENST00000396542 IGHMBP2P38935 993 aaKnown RBP22.34■■□□□ 1.17
TNFSF13-204ENST00000396542 DZIP1LQ8IYY4 767 aaKnown RBP22.34■■□□□ 1.17
TNFSF13-204ENST00000396542 CHMP3Q9Y3E7 222 aa22.34■■□□□ 1.17
TNFSF13-204ENST00000396542 RLBP1P12271 317 aa22.33■■□□□ 1.17
TNFSF13-204ENST00000396542 CCDC57Q2TAC2 916 aa22.33■■□□□ 1.17
TNFSF13-204ENST00000396542 MINPP1Q9UNW1 487 aa22.33■■□□□ 1.17
TNFSF13-204ENST00000396542 GNAI3P08754 354 aa22.32■■□□□ 1.16
TNFSF13-204ENST00000396542 FTSJ3Q8IY81 847 aaKnown RBP22.32■■□□□ 1.16
TNFSF13-204ENST00000396542 POLLQ9UGP5 575 aa22.32■■□□□ 1.16
TNFSF13-204ENST00000396542 HDAC5Q9UQL6 1122 aa22.32■■□□□ 1.16
TNFSF13-204ENST00000396542 XDHP47989 1333 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms