RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 CACNA1FO60840 1977 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 PDIA6Q15084 440 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 PCDH11XQ9BZA7 1347 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 PCDH11YQ9BZA8 1340 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 C5P01031 1676 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 VPS53Q5VIR6 699 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 MTMR6Q9Y217 621 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 KAT6BQ8WYB5 2073 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 SHANK3Q9BYB0 1731 aa16.71■□□□□ 0.27
CCHCR1-203ENST00000396268 ADCY9O60503 1353 aa16.71■□□□□ 0.27
CCHCR1-203ENST00000396268 ZSCAN20P17040 1043 aaPredicted RBP16.71■□□□□ 0.27
CCHCR1-203ENST00000396268 FERMT3Q86UX7 667 aa16.71■□□□□ 0.27
CCHCR1-203ENST00000396268 DBF4Q9UBU7 674 aaPredicted RBP16.71■□□□□ 0.27
CCHCR1-203ENST00000396268 TOM1O60784 492 aa16.71■□□□□ 0.26
CCHCR1-203ENST00000396268 PTCD1O75127 700 aaKnown RBP16.71■□□□□ 0.26
CCHCR1-203ENST00000396268 HOXB7P09629 217 aa16.71■□□□□ 0.26
CCHCR1-203ENST00000396268 ME3Q16798 604 aa16.71■□□□□ 0.26
CCHCR1-203ENST00000396268 MTERF4Q7Z6M4 381 aaKnown RBP16.71■□□□□ 0.26
CCHCR1-203ENST00000396268 PARP4Q9UKK3 1724 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 TTC5Q8N0Z6 440 aa16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 ZSCAN31Q96LW9 406 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 FAM227BQ96M60 508 aa16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 SH2B1Q9NRF2 756 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 KDM4AO75164 1064 aa16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 TCEANC2Q96MN5 208 aa16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 ZSWIM6Q9HCJ5 1215 aa16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 RBM8AQ9Y5S9 174 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 LARP1BQ659C4 914 aaKnown RBP16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 EVI5LQ96CN4 794 aa16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 CCDC171Q6TFL3 1326 aa16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 ERC1Q8IUD2 1116 aa16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 PIBF1Q8WXW3 757 aa16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 SIL1Q9H173 461 aa16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 FAM173BQ6P4H8 233 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 G3BP1Q13283 466 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 CREB3L3Q68CJ9 461 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 BCL2L12Q9HB09 334 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 MRC1P22897 1456 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 U2AF2P26368 475 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 NMIQ13287 307 aaPredicted RBP16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 BOLA2Q9H3K6 86 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 TPCN1Q9ULQ1 816 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 KIF3AQ9Y496 699 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 COL22A1Q8NFW1 1626 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 MTX1Q13505 466 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 NECTIN1Q15223 517 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 KSR2Q6VAB6 950 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 TM6SF1Q9BZW5 370 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 DMTNQ08495 405 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 CAMK4Q16566 473 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 COL14A1Q05707 1796 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-203ENST00000396268 FSD1Q9BTV5 496 aa16.66■□□□□ 0.26
CCHCR1-203ENST00000396268 PYCARDQ9ULZ3 195 aa16.66■□□□□ 0.26
CCHCR1-203ENST00000396268 ALDH1L1O75891 902 aa16.66■□□□□ 0.26
CCHCR1-203ENST00000396268 EAF2Q96CJ1 260 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-203ENST00000396268 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-203ENST00000396268 CCDC192P0DO97 292 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 KRT85P78386 507 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 NKX1-1Q15270 411 aaPredicted RBP16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 CDC37L1Q7L3B6 337 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 SUCLG2Q96I99 432 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 FMNL2Q96PY5 1086 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 DDX21Q9NR30 783 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 TOGARAM1Q9Y4F4 1720 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 SNRPA1P09661 255 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 STK3Q13188 491 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 XAGE3Q8WTP9 111 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 FUCA2Q9BTY2 467 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 BICC1Q9H694 974 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 TLR7Q9NYK1 1049 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 ASAP1Q9ULH1 1129 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 GOLGA6L4A6NEF3 574 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 PSMA5P28066 241 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 PDE4CQ08493 712 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 COPS6Q7L5N1 327 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 TTC6Q86TZ1 520 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 GRM8O00222 908 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 SLC27A2O14975 620 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 SASH1O94885 1247 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 BLOC1S2Q6QNY1 142 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 KLHDC4Q8TBB5 520 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 GLI3P10071 1580 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 A0A0D9SFI3 127 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 RIOK3O14730 519 aaKnown RBP16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 AP5Z1O43299 807 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 LRP10Q7Z4F1 713 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 PDCL2Q8N4E4 241 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 PIGBQ92521 554 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 MAP4K1Q92918 833 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 CCDC9Q9Y3X0 531 aaKnown RBP16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 TFIP11Q9UBB9 837 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-203ENST00000396268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-203ENST00000396268 ERVV-2B6SEH9 535 aa16.63■□□□□ 0.25
CCHCR1-203ENST00000396268 HIP1O00291 1037 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms