RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 TMEM51Q9NW97 253 aa21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 XRN1Q8IZH2 1706 aaKnown RBP21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 SBNO1A3KN83 1393 aa21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 KCNQ3O43525 872 aa21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 KINO60870 393 aaKnown RBP21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 G3BP1Q13283 466 aaKnown RBP eCLIP21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 ZNF589Q86UQ0 364 aaPredicted RBP21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 AOPEPQ8N6M6 819 aa21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 EDC3Q96F86 508 aaKnown RBP21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 TLR7Q9NYK1 1049 aaKnown RBP21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 USP6P35125 1406 aa21.34■■□□□ 1.01
HERPUD2-202ENST00000396081 RIMBP3CA6NJZ7 1639 aa21.34■■□□□ 1.01
HERPUD2-202ENST00000396081 RIMBP3BA6NNM3 1639 aa21.34■■□□□ 1.01
HERPUD2-202ENST00000396081 RIMBP3Q9UFD9 1639 aa21.34■■□□□ 1.01
HERPUD2-202ENST00000396081 HIP1O00291 1037 aa21.34■■□□□ 1.01
HERPUD2-202ENST00000396081 CAVIN2O95810 425 aa21.34■■□□□ 1.01
HERPUD2-202ENST00000396081 ERCC6LQ2NKX8 1250 aa21.34■■□□□ 1.01
HERPUD2-202ENST00000396081 EAF2Q96CJ1 260 aaPredicted RBP21.34■■□□□ 1.01
HERPUD2-202ENST00000396081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.34■■□□□ 1.01
HERPUD2-202ENST00000396081 ROBO2Q9HCK4 1378 aa21.34■■□□□ 1.01
HERPUD2-202ENST00000396081 RESTQ13127 1097 aa21.34■■□□□ 1.01
HERPUD2-202ENST00000396081 CWF19L2Q2TBE0 894 aaKnown RBP21.34■■□□□ 1.01
HERPUD2-202ENST00000396081 KDRP35968 1356 aa21.33■■□□□ 1.01
HERPUD2-202ENST00000396081 PLEKHG3A1L390 1219 aa21.33■■□□□ 1.01
HERPUD2-202ENST00000396081 CCZ1BP86790 482 aa21.33■■□□□ 1.01
HERPUD2-202ENST00000396081 CCZ1P86791 482 aaPredicted RBP21.33■■□□□ 1.01
HERPUD2-202ENST00000396081 C14orf37Q86TY3 774 aa21.33■■□□□ 1.01
HERPUD2-202ENST00000396081 ERC1Q8IUD2 1116 aa21.33■■□□□ 1.01
HERPUD2-202ENST00000396081 FMNL2Q96PY5 1086 aa21.33■■□□□ 1
HERPUD2-202ENST00000396081 ITSN1Q15811 1721 aa21.33■■□□□ 1
HERPUD2-202ENST00000396081 SNW1Q13573 536 aaKnown RBP21.32■■□□□ 1
HERPUD2-202ENST00000396081 GUCY1B3Q02153 619 aa21.32■■□□□ 1
HERPUD2-202ENST00000396081 SARM1Q6SZW1 724 aa21.32■■□□□ 1
HERPUD2-202ENST00000396081 MAP3K2Q9Y2U5 619 aa21.32■■□□□ 1
HERPUD2-202ENST00000396081 SYT10Q6XYQ8 523 aa21.32■■□□□ 1
HERPUD2-202ENST00000396081 SMC2O95347 1197 aa21.31■■□□□ 1
HERPUD2-202ENST00000396081 ME1P48163 572 aa21.31■■□□□ 1
HERPUD2-202ENST00000396081 Q6ZUG5 572 aa21.31■■□□□ 1
HERPUD2-202ENST00000396081 TIGD1Q96MW7 591 aa21.31■■□□□ 1
HERPUD2-202ENST00000396081 LGR6Q9HBX8 967 aa21.31■■□□□ 1
HERPUD2-202ENST00000396081 USP31Q70CQ4 1352 aa21.31■■□□□ 1
HERPUD2-202ENST00000396081 ZRSR1Q15695 479 aaKnown RBP21.31■■□□□ 1
HERPUD2-202ENST00000396081 CEP57L1Q8IYX8 460 aa21.31■■□□□ 1
HERPUD2-202ENST00000396081 GOLPH3LQ9H4A5 285 aa21.31■■□□□ 1
HERPUD2-202ENST00000396081 ANO10Q9NW15 660 aa21.31■■□□□ 1
HERPUD2-202ENST00000396081 PXDNLA1KZ92 1463 aa21.3■■□□□ 1
HERPUD2-202ENST00000396081 SDF4Q9BRK5 362 aa21.3■■□□□ 1
HERPUD2-202ENST00000396081 NOL10Q9BSC4 688 aaKnown RBP21.3■■□□□ 1
HERPUD2-202ENST00000396081 ESF1Q9H501 851 aaKnown RBP21.3■■□□□ 1
HERPUD2-202ENST00000396081 HOMER1Q86YM7 354 aa21.3■■□□□ 1
HERPUD2-202ENST00000396081 KLHDC4Q8TBB5 520 aa21.3■■□□□ 1
HERPUD2-202ENST00000396081 NDUFB9Q9Y6M9 179 aa21.3■■□□□ 1
HERPUD2-202ENST00000396081 FSIP1Q8NA03 581 aa21.3■■□□□ 1
HERPUD2-202ENST00000396081 NEK1Q96PY6 1258 aa21.3■■□□□ 1
HERPUD2-202ENST00000396081 ZNF446Q9NWS9 450 aa21.3■■□□□ 1
HERPUD2-202ENST00000396081 EIF4A1P60842 406 aaKnown RBP21.29■■□□□ 1
HERPUD2-202ENST00000396081 LRRN4CLQ8ND94 238 aa21.29■■□□□ 1
HERPUD2-202ENST00000396081 CCDC9Q9Y3X0 531 aaKnown RBP21.29■■□□□ 1
HERPUD2-202ENST00000396081 CTAGE5O15320 804 aa21.29■■□□□ 1
HERPUD2-202ENST00000396081 SASH1O94885 1247 aa21.29■■□□□ 1
HERPUD2-202ENST00000396081 HDGFP51858 240 aaKnown RBP21.29■■□□□ 1
HERPUD2-202ENST00000396081 DHX40Q8IX18 779 aaKnown RBP21.29■■□□□ 1
HERPUD2-202ENST00000396081 ZSCAN16Q9H4T2 348 aaPredicted RBP21.29■■□□□ 1
HERPUD2-202ENST00000396081 TMC6Q7Z403 805 aa21.28■■□□□ 1
HERPUD2-202ENST00000396081 FAM208AQ9UK61 1670 aaKnown RBP21.28■■□□□ 1
HERPUD2-202ENST00000396081 IRX5P78411 483 aaPredicted RBP21.28■■□□□ 1
HERPUD2-202ENST00000396081 AIMP1Q12904 312 aaKnown RBP21.28■■□□□ 1
HERPUD2-202ENST00000396081 BMS1Q14692 1282 aaKnown RBP21.28■■□□□ 1
HERPUD2-202ENST00000396081 CCDC129Q6ZRS4 1044 aa21.28■■□□□ 1
HERPUD2-202ENST00000396081 TEFQ10587 303 aa21.27■■□□□ 1
HERPUD2-202ENST00000396081 USP28Q96RU2 1077 aa21.27■■□□□ 1
HERPUD2-202ENST00000396081 CCT2P78371 535 aaKnown RBP21.27■■□□□ 1
HERPUD2-202ENST00000396081 AKAP12Q02952 1782 aa21.27■■□□□ 1
HERPUD2-202ENST00000396081 CHGBP05060 677 aa21.27■□□□□ 0.99
HERPUD2-202ENST00000396081 HOXC9P31274 260 aa21.27■□□□□ 0.99
HERPUD2-202ENST00000396081 ARHGAP29Q52LW3 1261 aa21.27■□□□□ 0.99
HERPUD2-202ENST00000396081 SIRT1Q96EB6 747 aa21.27■□□□□ 0.99
HERPUD2-202ENST00000396081 SLC26A8Q96RN1 970 aa21.27■□□□□ 0.99
HERPUD2-202ENST00000396081 HMG20BQ9P0W2 317 aa21.26■□□□□ 0.99
HERPUD2-202ENST00000396081 BIN1O00499 593 aa21.26■□□□□ 0.99
HERPUD2-202ENST00000396081 POLR3GO15318 223 aaPredicted RBP21.26■□□□□ 0.99
HERPUD2-202ENST00000396081 GSDMDP57764 484 aa21.26■□□□□ 0.99
HERPUD2-202ENST00000396081 KIF2AO00139 706 aaPredicted RBP21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 TAF5LO75529 589 aa21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 SCRN1Q12765 414 aa21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 NAT10Q9H0A0 1025 aaKnown RBP21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 CALCOCO1Q9P1Z2 691 aa21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 ERBB3P21860 1342 aa21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 ADCY9O60503 1353 aa21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 RGPD1P0DJD0 1748 aa21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 PROSER3Q2NL68 480 aa21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 SUCLG2Q96I99 432 aa21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 BICC1Q9H694 974 aaKnown RBP21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 IFNKQ9P0W0 207 aa21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 SPATA31D1Q6ZQQ2 1576 aa21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 NPHP4O75161 1426 aaPredicted RBP21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 SFPQP23246 707 aaKnown RBP eCLIP21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 MTX1Q13505 466 aa21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 E4F1Q66K89 784 aaPredicted RBP21.25■□□□□ 0.99
HERPUD2-202ENST00000396081 BTBD11A6QL63 1104 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms