RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 NGLY1Q96IV0 654 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 TMX3Q96JJ7 454 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 CCDC171Q6TFL3 1326 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 ZNF609O15014 1411 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 LOC102724428A0A0B4J2F2 783 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 SIK1P57059 783 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 TAF7LQ5H9L4 462 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 CDHR2Q9BYE9 1310 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 PUS3Q9BZE2 481 aaKnown RBP14.64□□□□□ -0.07
ITGB1-202ENST00000396033 JCADQ9P266 1359 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 A0A0D9SFI3 127 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 ERVV-1B6SEH8 477 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 GBP4Q96PP9 640 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 CCDC87Q9NVE4 849 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 NDUFB9Q9Y6M9 179 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 PALLDQ8WX93 1383 aa14.64□□□□□ -0.07
ITGB1-202ENST00000396033 RASEFQ8IZ41 740 aa14.63□□□□□ -0.07
ITGB1-202ENST00000396033 SYNE4Q8N205 404 aa14.63□□□□□ -0.07
ITGB1-202ENST00000396033 ZGPATQ8N5A5 531 aaKnown RBP14.63□□□□□ -0.07
ITGB1-202ENST00000396033 CWC22Q9HCG8 908 aaKnown RBP14.63□□□□□ -0.07
ITGB1-202ENST00000396033 DDX11L8A8MPP1 907 aa14.63□□□□□ -0.07
ITGB1-202ENST00000396033 SSFA2P28290 1259 aa14.63□□□□□ -0.07
ITGB1-202ENST00000396033 IFIT5Q13325 482 aaKnown RBP14.63□□□□□ -0.07
ITGB1-202ENST00000396033 HAUS7Q99871 368 aa14.63□□□□□ -0.07
ITGB1-202ENST00000396033 CRKLP46109 303 aaKnown RBP14.63□□□□□ -0.07
ITGB1-202ENST00000396033 TIMM10P62072 90 aa14.63□□□□□ -0.07
ITGB1-202ENST00000396033 PRPF40BQ6NWY9 871 aaKnown RBP14.63□□□□□ -0.07
ITGB1-202ENST00000396033 TRMT112Q9UI30 125 aaKnown RBP14.63□□□□□ -0.07
ITGB1-202ENST00000396033 NUP98P52948 1817 aa14.63□□□□□ -0.07
ITGB1-202ENST00000396033 CSF1RP07333 972 aa14.62□□□□□ -0.07
ITGB1-202ENST00000396033 KCNJ4P48050 445 aa14.62□□□□□ -0.07
ITGB1-202ENST00000396033 CEP126Q9P2H0 1117 aa14.62□□□□□ -0.07
ITGB1-202ENST00000396033 INTS5Q6P9B9 1019 aaKnown RBP14.62□□□□□ -0.07
ITGB1-202ENST00000396033 EIF5P55010 431 aaKnown RBP14.62□□□□□ -0.07
ITGB1-202ENST00000396033 VPS72Q15906 364 aa14.62□□□□□ -0.07
ITGB1-202ENST00000396033 FAM43AQ8N2R8 423 aa14.62□□□□□ -0.07
ITGB1-202ENST00000396033 RFX7Q2KHR2 1363 aa14.62□□□□□ -0.07
ITGB1-202ENST00000396033 MED23Q9ULK4 1368 aa14.62□□□□□ -0.07
ITGB1-202ENST00000396033 BCL9LQ86UU0 1499 aa14.62□□□□□ -0.07
ITGB1-202ENST00000396033 A0A1B0GUL7 405 aa14.61□□□□□ -0.07
ITGB1-202ENST00000396033 IRS4O14654 1257 aaPredicted RBP14.61□□□□□ -0.07
ITGB1-202ENST00000396033 NUCB2P80303 420 aa14.61□□□□□ -0.07
ITGB1-202ENST00000396033 SNRKQ9NRH2 765 aa14.61□□□□□ -0.07
ITGB1-202ENST00000396033 FBXO3Q9UK99 471 aa14.61□□□□□ -0.07
ITGB1-202ENST00000396033 ITPK1Q13572 414 aa14.61□□□□□ -0.07
ITGB1-202ENST00000396033 DDX46Q7L014 1031 aaKnown RBP14.61□□□□□ -0.07
ITGB1-202ENST00000396033 RBM8AQ9Y5S9 174 aaKnown RBP14.61□□□□□ -0.07
ITGB1-202ENST00000396033 UBN2Q6ZU65 1347 aa14.61□□□□□ -0.07
ITGB1-202ENST00000396033 KCNQ2O43526 872 aa14.61□□□□□ -0.07
ITGB1-202ENST00000396033 CTSWP56202 376 aa14.61□□□□□ -0.07
ITGB1-202ENST00000396033 SMARCC1Q92922 1105 aaPredicted RBP14.61□□□□□ -0.07
ITGB1-202ENST00000396033 CASTP20810 708 aaKnown RBP14.6□□□□□ -0.07
ITGB1-202ENST00000396033 ZNF589Q86UQ0 364 aaPredicted RBP14.6□□□□□ -0.07
ITGB1-202ENST00000396033 ZNF34Q8IZ26 560 aa14.6□□□□□ -0.07
ITGB1-202ENST00000396033 TTLL11Q8NHH1 800 aa14.6□□□□□ -0.07
ITGB1-202ENST00000396033 GREM2Q9H772 168 aa14.6□□□□□ -0.07
ITGB1-202ENST00000396033 ZKSCAN1P17029 563 aaPredicted RBP14.59□□□□□ -0.07
ITGB1-202ENST00000396033 ITGA6P23229 1130 aa14.59□□□□□ -0.07
ITGB1-202ENST00000396033 CUL4AQ13619 759 aa14.59□□□□□ -0.07
ITGB1-202ENST00000396033 NECTIN1Q15223 517 aa14.59□□□□□ -0.07
ITGB1-202ENST00000396033 MAP4K1Q92918 833 aa14.59□□□□□ -0.07
ITGB1-202ENST00000396033 AKAP2Q9Y2D5 859 aa14.59□□□□□ -0.07
ITGB1-202ENST00000396033 CICQ96RK0 1608 aaPredicted RBP14.59□□□□□ -0.07
ITGB1-202ENST00000396033 JAKMIP1Q96N16 626 aaKnown RBP14.59□□□□□ -0.07
ITGB1-202ENST00000396033 PAG1Q9NWQ8 432 aa14.59□□□□□ -0.07
ITGB1-202ENST00000396033 RREB1Q92766 1687 aa14.59□□□□□ -0.07
ITGB1-202ENST00000396033 MYH3P11055 1940 aa14.59□□□□□ -0.07
ITGB1-202ENST00000396033 GOLIM4O00461 696 aa14.59□□□□□ -0.07
ITGB1-202ENST00000396033 CREB3L3Q68CJ9 461 aa14.59□□□□□ -0.07
ITGB1-202ENST00000396033 KBTBD3Q8NAB2 608 aa14.59□□□□□ -0.07
ITGB1-202ENST00000396033 KCNB2Q92953 911 aa14.59□□□□□ -0.07
ITGB1-202ENST00000396033 ANKRD18BA2A2Z9 1011 aa14.58□□□□□ -0.07
ITGB1-202ENST00000396033 IFIT1P09914 478 aaKnown RBP14.58□□□□□ -0.07
ITGB1-202ENST00000396033 TTC14Q96N46 770 aa14.58□□□□□ -0.07
ITGB1-202ENST00000396033 PDE8AO60658 829 aa14.58□□□□□ -0.08
ITGB1-202ENST00000396033 PKP1Q13835 747 aa14.58□□□□□ -0.08
ITGB1-202ENST00000396033 TRAK2O60296 914 aa14.58□□□□□ -0.08
ITGB1-202ENST00000396033 GORABQ5T7V8 394 aa14.58□□□□□ -0.08
ITGB1-202ENST00000396033 RIC1Q4ADV7 1423 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 CYP2E1P05181 493 aaPredicted RBP14.57□□□□□ -0.08
ITGB1-202ENST00000396033 AK2P54819 239 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 ADCK5Q3MIX3 580 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 INTS4Q96HW7 963 aaKnown RBP14.57□□□□□ -0.08
ITGB1-202ENST00000396033 CPA1P15085 419 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 METTL24Q5JXM2 366 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 RNF20Q5VTR2 975 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 LDHAL6AQ6ZMR3 332 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 SLC27A2O14975 620 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 CAMTA2O94983 1202 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 CHGBP05060 677 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 CCDC158Q5M9N0 1113 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 TTC39AQ5SRH9 613 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 FNBP4Q8N3X1 1017 aaPredicted RBP14.57□□□□□ -0.08
ITGB1-202ENST00000396033 CNNM1Q9NRU3 951 aa14.57□□□□□ -0.08
ITGB1-202ENST00000396033 MYH14Q7Z406 1995 aaKnown RBP14.57□□□□□ -0.08
ITGB1-202ENST00000396033 FAM177BA6PVY3 158 aa14.56□□□□□ -0.08
ITGB1-202ENST00000396033 ADORA1P30542 326 aa14.56□□□□□ -0.08
ITGB1-202ENST00000396033 XAGE2Q96GT9 111 aa14.56□□□□□ -0.08
ITGB1-202ENST00000396033 TM6SF1Q9BZW5 370 aa14.56□□□□□ -0.08
ITGB1-202ENST00000396033 USP21Q9UK80 565 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms