RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 PCDHB9Q9Y5E1 797 aa4.54□□□□□ -1.68
XRCC4-203ENST00000396027 TTC36A6NLP5 189 aa4.53□□□□□ -1.68
XRCC4-203ENST00000396027 HMGB1P1B2RPK0 211 aaPredicted RBP4.53□□□□□ -1.68
XRCC4-203ENST00000396027 DYNC1I1O14576 645 aa4.53□□□□□ -1.68
XRCC4-203ENST00000396027 HS1BP3Q53T59 392 aa4.53□□□□□ -1.68
XRCC4-203ENST00000396027 LILRA6Q6PI73 481 aa4.53□□□□□ -1.68
XRCC4-203ENST00000396027 ILDR2Q71H61 639 aa4.53□□□□□ -1.68
XRCC4-203ENST00000396027 FBXO11Q86XK2 927 aa4.53□□□□□ -1.68
XRCC4-203ENST00000396027 CNPY4Q8N129 248 aa4.53□□□□□ -1.68
XRCC4-203ENST00000396027 JPH1Q9HDC5 661 aaPredicted RBP4.53□□□□□ -1.68
XRCC4-203ENST00000396027 ZDHHC3Q9NYG2 299 aa4.53□□□□□ -1.68
XRCC4-203ENST00000396027 RAXQ9Y2V3 346 aa4.53□□□□□ -1.68
XRCC4-203ENST00000396027 ZNF865P0CJ78 1059 aaPredicted RBP4.52□□□□□ -1.69
XRCC4-203ENST00000396027 TLR1Q15399 786 aa4.52□□□□□ -1.69
XRCC4-203ENST00000396027 PKN1Q16512 942 aa4.52□□□□□ -1.69
XRCC4-203ENST00000396027 FBXO31Q5XUX0 539 aaPredicted RBP4.52□□□□□ -1.69
XRCC4-203ENST00000396027 ZDHHC13Q8IUH4 622 aa4.52□□□□□ -1.69
XRCC4-203ENST00000396027 ABI1Q8IZP0 508 aa4.52□□□□□ -1.69
XRCC4-203ENST00000396027 MNS1Q8NEH6 495 aa4.52□□□□□ -1.69
XRCC4-203ENST00000396027 NEFHP12036 1026 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 ITGB5P18084 799 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 MCM5P33992 734 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 RGS3P49796 1198 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 MRE11P49959 708 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 SETDB1Q15047 1291 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 RPAINQ86UA6 219 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 DMRTC2Q8IXT2 367 aaPredicted RBP4.51□□□□□ -1.69
XRCC4-203ENST00000396027 BRPF3Q9ULD4 1205 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 ZBTB7CA1YPR0 619 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 PATL2C9JE40 543 aaKnown RBP4.51□□□□□ -1.69
XRCC4-203ENST00000396027 ANP32CO43423 234 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 KIF1CO43896 1103 aaKnown RBP4.51□□□□□ -1.69
XRCC4-203ENST00000396027 AP1G2O75843 785 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 USP17L8P0C7I0 530 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 RFC5P40937 340 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 CBLL1Q75N03 491 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 WWC1Q8IX03 1113 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 GPATCH11Q8N954 259 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 AKTIPQ9H8T0 292 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 TMEM51Q9NW97 253 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 RAI14Q9P0K7 980 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 STOML1Q9UBI4 398 aa4.51□□□□□ -1.69
XRCC4-203ENST00000396027 PHLDB1Q86UU1 1377 aa4.5□□□□□ -1.69
XRCC4-203ENST00000396027 CFAP65Q6ZU64 1925 aaKnown RBP4.5□□□□□ -1.69
XRCC4-203ENST00000396027 AFF1P51825 1210 aaKnown RBP4.5□□□□□ -1.69
XRCC4-203ENST00000396027 PDCL2Q8N4E4 241 aa4.5□□□□□ -1.69
XRCC4-203ENST00000396027 PCMTD1Q96MG8 357 aaPredicted RBP4.5□□□□□ -1.69
XRCC4-203ENST00000396027 CCDC94Q9BW85 323 aaPredicted RBP4.5□□□□□ -1.69
XRCC4-203ENST00000396027 MYH16Q9H6N6 1097 aa4.5□□□□□ -1.69
XRCC4-203ENST00000396027 KNSTRNQ9Y448 316 aa4.5□□□□□ -1.69
XRCC4-203ENST00000396027 KIF3AQ9Y496 699 aa4.5□□□□□ -1.69
XRCC4-203ENST00000396027 ZBBXA8MT70 800 aa4.49□□□□□ -1.69
XRCC4-203ENST00000396027 MFAP1P55081 439 aaKnown RBP4.49□□□□□ -1.69
XRCC4-203ENST00000396027 ANAPC15P60006 121 aa4.49□□□□□ -1.69
XRCC4-203ENST00000396027 HMGN5P82970 282 aaKnown RBP4.49□□□□□ -1.69
XRCC4-203ENST00000396027 NFKBIBQ15653 356 aa4.49□□□□□ -1.69
XRCC4-203ENST00000396027 NEUROD2Q15784 382 aa4.49□□□□□ -1.69
XRCC4-203ENST00000396027 NBPF9Q3BBW0 867 aa4.49□□□□□ -1.69
XRCC4-203ENST00000396027 TMEM259Q4ZIN3 620 aa4.49□□□□□ -1.69
XRCC4-203ENST00000396027 ZNF648Q5T619 568 aaPredicted RBP4.49□□□□□ -1.69
XRCC4-203ENST00000396027 SLC30A3Q99726 388 aa4.49□□□□□ -1.69
XRCC4-203ENST00000396027 TACO1Q9BSH4 297 aaKnown RBP4.49□□□□□ -1.69
XRCC4-203ENST00000396027 BRMS1Q9HCU9 246 aa4.49□□□□□ -1.69
XRCC4-203ENST00000396027 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.49□□□□□ -1.69
XRCC4-203ENST00000396027 TERF2IPQ9NYB0 399 aa4.49□□□□□ -1.69
XRCC4-203ENST00000396027 JAG2Q9Y219 1238 aa4.49□□□□□ -1.69
XRCC4-203ENST00000396027 SOCS7O14512 581 aa4.48□□□□□ -1.69
XRCC4-203ENST00000396027 BUD31P41223 144 aaPredicted RBP4.48□□□□□ -1.69
XRCC4-203ENST00000396027 ZKSCAN8Q15776 578 aaPredicted RBP4.48□□□□□ -1.69
XRCC4-203ENST00000396027 ZNF124Q15973 351 aa4.48□□□□□ -1.69
XRCC4-203ENST00000396027 FRAT1Q92837 279 aaPredicted RBP4.48□□□□□ -1.69
XRCC4-203ENST00000396027 FEZ1Q99689 392 aa4.48□□□□□ -1.69
XRCC4-203ENST00000396027 PAIP2Q9BPZ3 127 aaKnown RBP4.48□□□□□ -1.69
XRCC4-203ENST00000396027 CARD10Q9BWT7 1032 aa4.48□□□□□ -1.69
XRCC4-203ENST00000396027 HMX1Q9NP08 348 aaPredicted RBP4.48□□□□□ -1.69
XRCC4-203ENST00000396027 CALCOCO1Q9P1Z2 691 aa4.48□□□□□ -1.69
XRCC4-203ENST00000396027 CCDC144AA2RUR9 1427 aa4.48□□□□□ -1.69
XRCC4-203ENST00000396027 ZBED9Q6R2W3 1325 aa4.47□□□□□ -1.69
XRCC4-203ENST00000396027 SPEM2Q0P670 501 aa4.47□□□□□ -1.69
XRCC4-203ENST00000396027 NFIAQ12857 509 aa4.47□□□□□ -1.69
XRCC4-203ENST00000396027 TRDNQ13061 729 aa4.47□□□□□ -1.69
XRCC4-203ENST00000396027 BECN1Q14457 450 aa4.47□□□□□ -1.69
XRCC4-203ENST00000396027 MSL1Q68DK7 614 aa4.47□□□□□ -1.69
XRCC4-203ENST00000396027 TMEM130Q8N3G9 435 aa4.47□□□□□ -1.69
XRCC4-203ENST00000396027 RAD50Q92878 1312 aa4.47□□□□□ -1.69
XRCC4-203ENST00000396027 OFD1O75665 1012 aa4.46□□□□□ -1.69
XRCC4-203ENST00000396027 BRPF1P55201 1214 aaPredicted RBP4.46□□□□□ -1.69
XRCC4-203ENST00000396027 SATB1Q01826 763 aa4.46□□□□□ -1.69
XRCC4-203ENST00000396027 HSP90AB4PQ58FF6 505 aa4.46□□□□□ -1.69
XRCC4-203ENST00000396027 BICDL1Q6ZP65 573 aa4.46□□□□□ -1.69
XRCC4-203ENST00000396027 NUDT8Q8WV74 236 aa4.46□□□□□ -1.69
XRCC4-203ENST00000396027 FAM210AQ96ND0 272 aa4.46□□□□□ -1.69
XRCC4-203ENST00000396027 TRIM34Q9BYJ4 488 aa4.46□□□□□ -1.69
XRCC4-203ENST00000396027 FEZ2Q9UHY8 353 aaPredicted RBP4.46□□□□□ -1.69
XRCC4-203ENST00000396027 ANGEL1Q9UNK9 670 aaKnown RBP4.46□□□□□ -1.69
XRCC4-203ENST00000396027 SCRIBQ14160 1630 aa4.46□□□□□ -1.7
XRCC4-203ENST00000396027 PRR19A6NJB7 356 aa4.46□□□□□ -1.7
XRCC4-203ENST00000396027 GOLGA6L6A8MZA4 724 aa4.46□□□□□ -1.7
XRCC4-203ENST00000396027 GOLGA6L22H0YM25 854 aa4.46□□□□□ -1.7
XRCC4-203ENST00000396027 LIG1P18858 919 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms