RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 ZBTB1Q9Y2K1 713 aa21.49■■□□□ 1.03
SREBF1-204ENST00000395756 ATP5JP18859 108 aa21.48■■□□□ 1.03
SREBF1-204ENST00000395756 NECTIN1Q15223 517 aa21.48■■□□□ 1.03
SREBF1-204ENST00000395756 L1TD1Q5T7N2 865 aaKnown RBP21.48■■□□□ 1.03
SREBF1-204ENST00000395756 FAM43AQ8N2R8 423 aa21.48■■□□□ 1.03
SREBF1-204ENST00000395756 LIMCH1Q9UPQ0 1083 aa21.47■■□□□ 1.03
SREBF1-204ENST00000395756 CYP46A1Q9Y6A2 500 aa21.47■■□□□ 1.03
SREBF1-204ENST00000395756 PKD1L3Q7Z443 1732 aa21.47■■□□□ 1.03
SREBF1-204ENST00000395756 SKOR2Q2VWA4 1001 aaPredicted RBP21.47■■□□□ 1.03
SREBF1-204ENST00000395756 RBM27Q9P2N5 1060 aaKnown RBP21.47■■□□□ 1.03
SREBF1-204ENST00000395756 FKBP4Q02790 459 aaKnown RBP eCLIP21.47■■□□□ 1.03
SREBF1-204ENST00000395756 GORABQ5T7V8 394 aa21.47■■□□□ 1.03
SREBF1-204ENST00000395756 TTC14Q96N46 770 aa21.47■■□□□ 1.03
SREBF1-204ENST00000395756 LMBRD1Q9NUN5 540 aa21.47■■□□□ 1.03
SREBF1-204ENST00000395756 HIP1O00291 1037 aa21.46■■□□□ 1.03
SREBF1-204ENST00000395756 SLC27A2O14975 620 aa21.46■■□□□ 1.03
SREBF1-204ENST00000395756 PDE4CQ08493 712 aa21.46■■□□□ 1.03
SREBF1-204ENST00000395756 MAP4K1Q92918 833 aa21.46■■□□□ 1.03
SREBF1-204ENST00000395756 A0A1B0GUL7 405 aa21.46■■□□□ 1.03
SREBF1-204ENST00000395756 EYA2O00167 538 aa21.46■■□□□ 1.03
SREBF1-204ENST00000395756 KCPQ6ZWJ8 1503 aa21.45■■□□□ 1.02
SREBF1-204ENST00000395756 STK3Q13188 491 aa21.45■■□□□ 1.02
SREBF1-204ENST00000395756 ISCA1Q9BUE6 129 aa21.45■■□□□ 1.02
SREBF1-204ENST00000395756 CEP126Q9P2H0 1117 aa21.45■■□□□ 1.02
SREBF1-204ENST00000395756 NSFL1CQ9UNZ2 370 aaKnown RBP21.44■■□□□ 1.02
SREBF1-204ENST00000395756 ABCC6O95255 1503 aa21.44■■□□□ 1.02
SREBF1-204ENST00000395756 IL15P40933 162 aaPredicted RBP21.44■■□□□ 1.02
SREBF1-204ENST00000395756 TEX13AQ9BXU3 409 aaPredicted RBP21.43■■□□□ 1.02
SREBF1-204ENST00000395756 SMC3Q9UQE7 1217 aa21.43■■□□□ 1.02
SREBF1-204ENST00000395756 FSD2A1L4K1 749 aa21.43■■□□□ 1.02
SREBF1-204ENST00000395756 BRD1O95696 1058 aa21.43■■□□□ 1.02
SREBF1-204ENST00000395756 ADORA1P30542 326 aa21.43■■□□□ 1.02
SREBF1-204ENST00000395756 INTS4Q96HW7 963 aaKnown RBP21.43■■□□□ 1.02
SREBF1-204ENST00000395756 GRPEL1Q9HAV7 217 aa21.43■■□□□ 1.02
SREBF1-204ENST00000395756 TRMT112Q9UI30 125 aaKnown RBP21.43■■□□□ 1.02
SREBF1-204ENST00000395756 TUBGCP6Q96RT7 1819 aa21.43■■□□□ 1.02
SREBF1-204ENST00000395756 TAF5LO75529 589 aa21.42■■□□□ 1.02
SREBF1-204ENST00000395756 IFIT1P09914 478 aaKnown RBP21.42■■□□□ 1.02
SREBF1-204ENST00000395756 CYP19A1P11511 503 aaPredicted RBP21.42■■□□□ 1.02
SREBF1-204ENST00000395756 FGD1P98174 961 aa21.42■■□□□ 1.02
SREBF1-204ENST00000395756 DDB1Q16531 1140 aa21.42■■□□□ 1.02
SREBF1-204ENST00000395756 NAP1L5Q96NT1 182 aaPredicted RBP21.42■■□□□ 1.02
SREBF1-204ENST00000395756 HAUS7Q99871 368 aa21.42■■□□□ 1.02
SREBF1-204ENST00000395756 EPB41L2O43491 1005 aaKnown RBP21.42■■□□□ 1.02
SREBF1-204ENST00000395756 IFIT5Q13325 482 aaKnown RBP21.42■■□□□ 1.02
SREBF1-204ENST00000395756 KLHL40Q2TBA0 621 aa21.42■■□□□ 1.02
SREBF1-204ENST00000395756 CLEC17AQ6ZS10 378 aa21.42■■□□□ 1.02
SREBF1-204ENST00000395756 LRRC2Q9BYS8 371 aa21.42■■□□□ 1.02
SREBF1-204ENST00000395756 ZSWIM6Q9HCJ5 1215 aa21.42■■□□□ 1.02
SREBF1-204ENST00000395756 PAG1Q9NWQ8 432 aa21.42■■□□□ 1.02
SREBF1-204ENST00000395756 ME3Q16798 604 aa21.41■■□□□ 1.02
SREBF1-204ENST00000395756 HSP90AB3PQ58FF7 597 aa21.41■■□□□ 1.02
SREBF1-204ENST00000395756 GPT2Q8TD30 523 aa21.41■■□□□ 1.02
SREBF1-204ENST00000395756 KCNQ4P56696 695 aa21.41■■□□□ 1.02
SREBF1-204ENST00000395756 VPS53Q5VIR6 699 aa21.41■■□□□ 1.02
SREBF1-204ENST00000395756 TPCN1Q9ULQ1 816 aa21.41■■□□□ 1.02
SREBF1-204ENST00000395756 RNF20Q5VTR2 975 aa21.4■■□□□ 1.02
SREBF1-204ENST00000395756 BLOC1S2Q6QNY1 142 aa21.4■■□□□ 1.02
SREBF1-204ENST00000395756 GIGYF2Q6Y7W6 1299 aaKnown RBP21.4■■□□□ 1.02
SREBF1-204ENST00000395756 GREM2Q9H772 168 aa21.4■■□□□ 1.02
SREBF1-204ENST00000395756 MAP3K15Q6ZN16 1313 aa21.4■■□□□ 1.02
SREBF1-204ENST00000395756 PLEKHG2Q9H7P9 1386 aa21.4■■□□□ 1.02
SREBF1-204ENST00000395756 PI16Q6UXB8 463 aa21.4■■□□□ 1.02
SREBF1-204ENST00000395756 DZIP3Q86Y13 1208 aaKnown RBP21.4■■□□□ 1.02
SREBF1-204ENST00000395756 PARP4Q9UKK3 1724 aaKnown RBP21.4■■□□□ 1.02
SREBF1-204ENST00000395756 ZBTB38Q8NAP3 1195 aaPredicted RBP21.39■■□□□ 1.02
SREBF1-204ENST00000395756 COL15A1P39059 1388 aa21.39■■□□□ 1.02
SREBF1-204ENST00000395756 PTMSP20962 102 aa21.39■■□□□ 1.01
SREBF1-204ENST00000395756 LDHAL6AQ6ZMR3 332 aa21.39■■□□□ 1.01
SREBF1-204ENST00000395756 NLRP10Q86W26 655 aa21.39■■□□□ 1.01
SREBF1-204ENST00000395756 GJB2P29033 226 aa21.39■■□□□ 1.01
SREBF1-204ENST00000395756 MCMDC2Q4G0Z9 681 aa21.39■■□□□ 1.01
SREBF1-204ENST00000395756 GLI3P10071 1580 aa21.38■■□□□ 1.01
SREBF1-204ENST00000395756 TNS2Q63HR2 1409 aa21.38■■□□□ 1.01
SREBF1-204ENST00000395756 SYT1P21579 422 aa21.38■■□□□ 1.01
SREBF1-204ENST00000395756 ATP6V1AP38606 617 aa21.38■■□□□ 1.01
SREBF1-204ENST00000395756 KBTBD3Q8NAB2 608 aa21.38■■□□□ 1.01
SREBF1-204ENST00000395756 HELBQ8NG08 1087 aaPredicted RBP21.38■■□□□ 1.01
SREBF1-204ENST00000395756 AFDNP55196 1824 aaKnown RBP21.38■■□□□ 1.01
SREBF1-204ENST00000395756 A0A0G2JLW4 131 aa21.38■■□□□ 1.01
SREBF1-204ENST00000395756 ITGA6P23229 1130 aa21.38■■□□□ 1.01
SREBF1-204ENST00000395756 MRE11P49959 708 aa21.38■■□□□ 1.01
SREBF1-204ENST00000395756 IL17RAQ96F46 866 aa21.38■■□□□ 1.01
SREBF1-204ENST00000395756 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.38■■□□□ 1.01
SREBF1-204ENST00000395756 ARFGEF2Q9Y6D5 1785 aa21.37■■□□□ 1.01
SREBF1-204ENST00000395756 VPS37CA5D8V6 355 aaPredicted RBP21.37■■□□□ 1.01
SREBF1-204ENST00000395756 IRS4O14654 1257 aaPredicted RBP21.37■■□□□ 1.01
SREBF1-204ENST00000395756 PPFIA3O75145 1194 aa21.37■■□□□ 1.01
SREBF1-204ENST00000395756 TTC39AQ5SRH9 613 aa21.37■■□□□ 1.01
SREBF1-204ENST00000395756 XAGE2Q96GT9 111 aa21.37■■□□□ 1.01
SREBF1-204ENST00000395756 CNNM1Q9NRU3 951 aa21.37■■□□□ 1.01
SREBF1-204ENST00000395756 PCCAP05165 728 aaPredicted RBP21.37■■□□□ 1.01
SREBF1-204ENST00000395756 METTL24Q5JXM2 366 aa21.37■■□□□ 1.01
SREBF1-204ENST00000395756 KCNQ2O43526 872 aa21.37■■□□□ 1.01
SREBF1-204ENST00000395756 HCLS1P14317 486 aaPredicted RBP21.37■■□□□ 1.01
SREBF1-204ENST00000395756 PSMA5P28066 241 aa21.37■■□□□ 1.01
SREBF1-204ENST00000395756 ZNF609O15014 1411 aa21.36■■□□□ 1.01
SREBF1-204ENST00000395756 SCARF1Q14162 830 aa21.36■■□□□ 1.01
SREBF1-204ENST00000395756 GADD45BO75293 160 aaPredicted RBP21.36■■□□□ 1.01
SREBF1-204ENST00000395756 WASHC4Q2M389 1173 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms