RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 KDRP35968 1356 aa8.38□□□□□ -1.07
PTPN20-208ENST00000395727 MAP3K5Q99683 1374 aa8.38□□□□□ -1.07
PTPN20-208ENST00000395727 KIF7Q2M1P5 1343 aa8.38□□□□□ -1.07
PTPN20-208ENST00000395727 CYP27B1O15528 508 aa8.38□□□□□ -1.07
PTPN20-208ENST00000395727 TMEM259Q4ZIN3 620 aa8.38□□□□□ -1.07
PTPN20-208ENST00000395727 USHBP1Q8N6Y0 703 aa8.38□□□□□ -1.07
PTPN20-208ENST00000395727 ANKLE1Q8NAG6 615 aa8.38□□□□□ -1.07
PTPN20-208ENST00000395727 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
PTPN20-208ENST00000395727 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
PTPN20-208ENST00000395727 MTFR1LQ9H019 292 aa8.38□□□□□ -1.07
PTPN20-208ENST00000395727 ITGB4P16144 1822 aa8.38□□□□□ -1.07
PTPN20-208ENST00000395727 CICQ96RK0 1608 aaPredicted RBP8.37□□□□□ -1.07
PTPN20-208ENST00000395727 PPEF1O14829 653 aaPredicted RBP8.37□□□□□ -1.07
PTPN20-208ENST00000395727 PER1O15534 1290 aaPredicted RBP8.37□□□□□ -1.07
PTPN20-208ENST00000395727 EIF4A2Q14240 407 aaKnown RBP8.37□□□□□ -1.07
PTPN20-208ENST00000395727 PTPRNQ16849 979 aa8.37□□□□□ -1.07
PTPN20-208ENST00000395727 SPG7Q9UQ90 795 aa8.37□□□□□ -1.07
PTPN20-208ENST00000395727 TAF1LQ8IZX4 1826 aa8.37□□□□□ -1.07
PTPN20-208ENST00000395727 SRCAPQ6ZRS2 3230 aa8.37□□□□□ -1.07
PTPN20-208ENST00000395727 CTDSPL2Q05D32 466 aa8.36□□□□□ -1.07
PTPN20-208ENST00000395727 ZNF827Q17R98 1081 aa8.36□□□□□ -1.07
PTPN20-208ENST00000395727 FCF1Q9Y324 198 aaKnown RBP8.36□□□□□ -1.07
PTPN20-208ENST00000395727 KNSTRNQ9Y448 316 aa8.36□□□□□ -1.07
PTPN20-208ENST00000395727 PALLDQ8WX93 1383 aa8.35□□□□□ -1.07
PTPN20-208ENST00000395727 AP1G2O75843 785 aa8.35□□□□□ -1.07
PTPN20-208ENST00000395727 BANK1Q8NDB2 785 aa8.35□□□□□ -1.07
PTPN20-208ENST00000395727 TSC1Q92574 1164 aa8.35□□□□□ -1.07
PTPN20-208ENST00000395727 SMARCC1Q92922 1105 aaPredicted RBP8.35□□□□□ -1.07
PTPN20-208ENST00000395727 SYTL4Q96C24 671 aaPredicted RBP8.35□□□□□ -1.07
PTPN20-208ENST00000395727 NUDT12Q9BQG2 462 aa8.35□□□□□ -1.07
PTPN20-208ENST00000395727 POLR3GLQ9BT43 218 aa8.35□□□□□ -1.07
PTPN20-208ENST00000395727 PDGFDQ9GZP0 370 aaPredicted RBP8.35□□□□□ -1.07
PTPN20-208ENST00000395727 C4BP0C0L5 1744 aa8.34□□□□□ -1.07
PTPN20-208ENST00000395727 PNPLA7Q6ZV29 1317 aa8.34□□□□□ -1.07
PTPN20-208ENST00000395727 ADAMTS7Q9UKP4 1686 aa8.34□□□□□ -1.07
PTPN20-208ENST00000395727 PPM1GO15355 546 aaPredicted RBP8.34□□□□□ -1.07
PTPN20-208ENST00000395727 CCNYL3P0C7X3 344 aa8.34□□□□□ -1.07
PTPN20-208ENST00000395727 PHKG2P15735 406 aa8.34□□□□□ -1.07
PTPN20-208ENST00000395727 PLA2G2CQ5R387 149 aa8.34□□□□□ -1.07
PTPN20-208ENST00000395727 MORC1Q86VD1 984 aa8.34□□□□□ -1.07
PTPN20-208ENST00000395727 IFNL2Q8IZJ0 200 aa8.34□□□□□ -1.07
PTPN20-208ENST00000395727 EVA1BQ9NVM1 165 aa8.34□□□□□ -1.07
PTPN20-208ENST00000395727 PPP1R1BQ9UD71 204 aaPredicted RBP8.34□□□□□ -1.07
PTPN20-208ENST00000395727 CCNL1Q9UK58 526 aaPredicted RBP8.34□□□□□ -1.07
PTPN20-208ENST00000395727 ZBTB7AO95365 584 aa8.33□□□□□ -1.08
PTPN20-208ENST00000395727 F12P00748 615 aaPredicted RBP8.33□□□□□ -1.08
PTPN20-208ENST00000395727 HSP90AB1P08238 724 aaKnown RBP8.33□□□□□ -1.08
PTPN20-208ENST00000395727 USP17L8P0C7I0 530 aa8.33□□□□□ -1.08
PTPN20-208ENST00000395727 AMOTQ4VCS5 1084 aa8.33□□□□□ -1.08
PTPN20-208ENST00000395727 EMID1Q96A84 441 aaPredicted RBP8.33□□□□□ -1.08
PTPN20-208ENST00000395727 COL3A1P02461 1466 aaPredicted RBP8.32□□□□□ -1.08
PTPN20-208ENST00000395727 MRC1P22897 1456 aa8.32□□□□□ -1.08
PTPN20-208ENST00000395727 UBR3Q6ZT12 1888 aa8.32□□□□□ -1.08
PTPN20-208ENST00000395727 KDM6AO15550 1401 aaPredicted RBP8.32□□□□□ -1.08
PTPN20-208ENST00000395727 ERVV-2B6SEH9 535 aa8.32□□□□□ -1.08
PTPN20-208ENST00000395727 TNNT2P45379 298 aaPredicted RBP8.32□□□□□ -1.08
PTPN20-208ENST00000395727 FLAD1Q8NFF5 587 aa8.32□□□□□ -1.08
PTPN20-208ENST00000395727 LRRN4Q8WUT4 740 aa8.32□□□□□ -1.08
PTPN20-208ENST00000395727 DCAF5Q96JK2 942 aa8.32□□□□□ -1.08
PTPN20-208ENST00000395727 COL5A3P25940 1745 aaPredicted RBP8.32□□□□□ -1.08
PTPN20-208ENST00000395727 SCN11AQ9UI33 1791 aa8.31□□□□□ -1.08
PTPN20-208ENST00000395727 IL13P35225 146 aa8.31□□□□□ -1.08
PTPN20-208ENST00000395727 PLEKHO1Q53GL0 409 aaPredicted RBP8.31□□□□□ -1.08
PTPN20-208ENST00000395727 PIGBQ92521 554 aa8.31□□□□□ -1.08
PTPN20-208ENST00000395727 TFCP2L1Q9NZI6 479 aa8.31□□□□□ -1.08
PTPN20-208ENST00000395727 KCNH2Q12809 1159 aa8.3□□□□□ -1.08
PTPN20-208ENST00000395727 PTCRAQ6ISU1 281 aaPredicted RBP8.3□□□□□ -1.08
PTPN20-208ENST00000395727 MPRIPQ6WCQ1 1025 aa8.3□□□□□ -1.08
PTPN20-208ENST00000395727 CCDC24Q8N4L8 307 aa8.3□□□□□ -1.08
PTPN20-208ENST00000395727 ARXQ96QS3 562 aa8.3□□□□□ -1.08
PTPN20-208ENST00000395727 SYT17Q9BSW7 474 aa8.3□□□□□ -1.08
PTPN20-208ENST00000395727 HMX1Q9NP08 348 aaPredicted RBP8.3□□□□□ -1.08
PTPN20-208ENST00000395727 TMOD3Q9NYL9 352 aa8.3□□□□□ -1.08
PTPN20-208ENST00000395727 LOC102724428A0A0B4J2F2 783 aa8.29□□□□□ -1.08
PTPN20-208ENST00000395727 SSFA2P28290 1259 aa8.29□□□□□ -1.08
PTPN20-208ENST00000395727 POLD1P28340 1107 aa8.29□□□□□ -1.08
PTPN20-208ENST00000395727 SIK1P57059 783 aa8.29□□□□□ -1.08
PTPN20-208ENST00000395727 LIAT1Q6ZQX7 453 aa8.29□□□□□ -1.08
PTPN20-208ENST00000395727 MTMR14Q8NCE2 650 aa8.29□□□□□ -1.08
PTPN20-208ENST00000395727 FHDC1Q9C0D6 1143 aaPredicted RBP8.29□□□□□ -1.08
PTPN20-208ENST00000395727 SNRKQ9NRH2 765 aa8.29□□□□□ -1.08
PTPN20-208ENST00000395727 MAP10Q9P2G4 905 aa8.29□□□□□ -1.08
PTPN20-208ENST00000395727 KAT6BQ8WYB5 2073 aa8.29□□□□□ -1.08
PTPN20-208ENST00000395727 RGS20O76081 388 aa8.28□□□□□ -1.08
PTPN20-208ENST00000395727 RPIAP49247 311 aa8.28□□□□□ -1.08
PTPN20-208ENST00000395727 MTHFSP49914 203 aa8.28□□□□□ -1.08
PTPN20-208ENST00000395727 KCNQ4P56696 695 aa8.28□□□□□ -1.08
PTPN20-208ENST00000395727 SULT6B1Q6IMI4 303 aa8.28□□□□□ -1.08
PTPN20-208ENST00000395727 COL23A1Q86Y22 540 aaPredicted RBP8.28□□□□□ -1.08
PTPN20-208ENST00000395727 AEBP1Q8IUX7 1158 aa8.28□□□□□ -1.08
PTPN20-208ENST00000395727 TJP1Q07157 1748 aa8.28□□□□□ -1.08
PTPN20-208ENST00000395727 SLC19A1P41440 591 aa8.27□□□□□ -1.09
PTPN20-208ENST00000395727 AKAP4Q5JQC9 854 aa8.27□□□□□ -1.09
PTPN20-208ENST00000395727 C1orf141Q5JVX7 400 aa8.27□□□□□ -1.09
PTPN20-208ENST00000395727 RC3H1Q5TC82 1133 aaKnown RBP8.27□□□□□ -1.09
PTPN20-208ENST00000395727 ZNF530Q6P9A1 599 aaPredicted RBP8.27□□□□□ -1.09
PTPN20-208ENST00000395727 TRIM34Q9BYJ4 488 aa8.27□□□□□ -1.09
PTPN20-208ENST00000395727 UNC93B1Q9H1C4 597 aa8.27□□□□□ -1.09
PTPN20-208ENST00000395727 ATG3Q9NT62 314 aa8.27□□□□□ -1.09
PTPN20-208ENST00000395727 ASAP1Q9ULH1 1129 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms