RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 ZBTB9Q96C00 473 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 CNNM1Q9NRU3 951 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 PDZRN3Q9UPQ7 1066 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 FAM169AQ9Y6X4 670 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 A6NNZ2 444 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 CEP104O60308 925 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 TMEM266Q2M3C6 531 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 TUBB8Q3ZCM7 444 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 CCDC25Q86WR0 208 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 IFT81Q8WYA0 676 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 MTRF1LQ9UGC7 380 aaKnown RBP9.08□□□□□ -0.96
TRPS1-203ENST00000395715 AKAP2Q9Y2D5 859 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 TAF7Q15545 349 aaPredicted RBP9.08□□□□□ -0.96
TRPS1-203ENST00000395715 CAPZA3Q96KX2 299 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 FAN1Q9Y2M0 1017 aa9.08□□□□□ -0.96
TRPS1-203ENST00000395715 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.08□□□□□ -0.963e-7■□□□□ 10.2
TRPS1-203ENST00000395715 RASSF2P50749 326 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 PHEXP78562 749 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 GTF3C6Q969F1 213 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 Q9H521 79 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 TLDC2A0PJX2 215 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 APOEP02649 317 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 RASIP1Q5U651 963 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 ZNF622Q969S3 477 aaKnown RBP eCLIP9.07□□□□□ -0.962e-8■□□□□ 10.5
TRPS1-203ENST00000395715 ANLNQ9NQW6 1124 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 CCDC196A0A1B0GTZ2 297 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 GIGYF1O75420 1035 aaPredicted RBP9.07□□□□□ -0.96
TRPS1-203ENST00000395715 HPDP32754 393 aaPredicted RBP9.07□□□□□ -0.96
TRPS1-203ENST00000395715 AMPD3Q01432 767 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 NOLC1Q14978 699 aaKnown RBP eCLIP9.07□□□□□ -0.96
TRPS1-203ENST00000395715 HAUS8Q9BT25 410 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 NUB1Q9Y5A7 615 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 SERPINI2O75830 405 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 CLUL1Q15846 466 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 PNMA8AQ86V59 439 aaPredicted RBP9.07□□□□□ -0.96
TRPS1-203ENST00000395715 NUDCD3Q8IVD9 361 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 RASEFQ8IZ41 740 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 ATAD2Q6PL18 1390 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 CUL4BQ13620 913 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 BCAP29Q9UHQ4 241 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 LRRD1A4D1F6 860 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 WDR46O15213 610 aaKnown RBP9.07□□□□□ -0.96
TRPS1-203ENST00000395715 AFAP1L2Q8N4X5 818 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 CTNNA3Q9UI47 895 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 GOLGA8AA7E2F4 631 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 GOLGA8BA8MQT2 603 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 GNAI2P04899 355 aa9.07□□□□□ -0.96
TRPS1-203ENST00000395715 BACH2Q9BYV9 841 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 SIL1Q9H173 461 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 CACYBPQ9HB71 228 aaKnown RBP9.06□□□□□ -0.96
TRPS1-203ENST00000395715 PPME1Q9Y570 386 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 AKR1B10O60218 316 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 GAS8O95995 478 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 PPP1R7Q15435 360 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 TAOK1Q7L7X3 1001 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 SRCIN1Q9C0H9 1055 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 CLCN1P35523 988 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 UACAQ9BZF9 1416 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 PLEKHH1Q9ULM0 1364 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 MAFGO15525 162 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 CCDC92Q53HC0 331 aaPredicted RBP9.06□□□□□ -0.96
TRPS1-203ENST00000395715 HSP90AA5PQ58FG0 334 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 CWC27Q6UX04 472 aaKnown RBP9.06□□□□□ -0.96
TRPS1-203ENST00000395715 SYCP3Q8IZU3 236 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 PPP1R9AQ9ULJ8 1098 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 UBASH3AP57075 661 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 CTAGE1Q96RT6 745 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 TACO1Q9BSH4 297 aaKnown RBP9.06□□□□□ -0.96
TRPS1-203ENST00000395715 BAIAP2L1Q9UHR4 511 aa9.06□□□□□ -0.96
TRPS1-203ENST00000395715 PIK3R5Q8WYR1 880 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 TBC1D31Q96DN5 1066 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 DDX19AQ9NUU7 478 aaKnown RBP9.05□□□□□ -0.96
TRPS1-203ENST00000395715 TTC21AQ8NDW8 1320 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 LONP1P36776 959 aaKnown RBP9.05□□□□□ -0.96
TRPS1-203ENST00000395715 CCDC122Q5T0U0 273 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 STXBP4Q6ZWJ1 553 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 ZSCAN29Q8IWY8 852 aaPredicted RBP9.05□□□□□ -0.96
TRPS1-203ENST00000395715 ZNF428Q96B54 188 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 IWS1Q96ST2 819 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 TRIM55Q9BYV6 548 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 UAP1Q16222 522 aaPredicted RBP9.05□□□□□ -0.96
TRPS1-203ENST00000395715 MAP3K21Q5TCX8 1036 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 LMBR1Q8WVP7 490 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 STK38LQ9Y2H1 464 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 MAN1A2O60476 641 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 TUBB4AP04350 444 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 TUBBP07437 444 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 UVSSAQ2YD98 709 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 WDR78Q5VTH9 848 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 VSIG1Q86XK7 387 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 PDZD8Q8NEN9 1154 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 FKBP4Q02790 459 aaKnown RBP eCLIP9.05□□□□□ -0.96
TRPS1-203ENST00000395715 EFCC1Q9HA90 598 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 LARSQ9P2J5 1176 aaKnown RBP9.05□□□□□ -0.96
TRPS1-203ENST00000395715 GIPC1O14908 333 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 CAVIN2O95810 425 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 PLCB3Q01970 1234 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 TRIM60Q495X7 471 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 SCINQ9Y6U3 715 aa9.05□□□□□ -0.96
TRPS1-203ENST00000395715 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms