RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 CREBZFQ9NS37 354 aa23.64■■□□□ 1.37
PDLIM7-205ENST00000393551 NIM1KQ8IY84 436 aa23.63■■□□□ 1.37
PDLIM7-205ENST00000393551 MPNDQ8N594 471 aa23.63■■□□□ 1.37
PDLIM7-205ENST00000393551 VPS33BQ9H267 617 aa23.63■■□□□ 1.37
PDLIM7-205ENST00000393551 EPS15P42566 896 aa23.62■■□□□ 1.37
PDLIM7-205ENST00000393551 DPP8Q6V1X1 898 aaPredicted RBP23.62■■□□□ 1.37
PDLIM7-205ENST00000393551 RIC3Q7Z5B4 369 aa23.62■■□□□ 1.37
PDLIM7-205ENST00000393551 PNMA8AQ86V59 439 aaPredicted RBP23.62■■□□□ 1.37
PDLIM7-205ENST00000393551 CELF1Q92879 486 aaKnown RBP23.62■■□□□ 1.37
PDLIM7-205ENST00000393551 TSR2Q969E8 191 aaKnown RBP23.62■■□□□ 1.37
PDLIM7-205ENST00000393551 TMX4Q9H1E5 349 aaPredicted RBP23.62■■□□□ 1.37
PDLIM7-205ENST00000393551 CXCL9Q07325 125 aa23.61■■□□□ 1.37
PDLIM7-205ENST00000393551 MAP1SQ66K74 1059 aaPredicted RBP23.61■■□□□ 1.37
PDLIM7-205ENST00000393551 WWC1Q8IX03 1113 aa23.61■■□□□ 1.37
PDLIM7-205ENST00000393551 CLEC11AQ9Y240 323 aa23.61■■□□□ 1.37
PDLIM7-205ENST00000393551 IRS4O14654 1257 aaPredicted RBP23.6■■□□□ 1.37
PDLIM7-205ENST00000393551 KIAA2012Q0VF49 1180 aa23.6■■□□□ 1.37
PDLIM7-205ENST00000393551 CCDC27Q2M243 656 aa23.6■■□□□ 1.37
PDLIM7-205ENST00000393551 SUPT20HQ8NEM7 779 aa23.6■■□□□ 1.37
PDLIM7-205ENST00000393551 ZEB1P37275 1124 aaPredicted RBP23.59■■□□□ 1.37
PDLIM7-205ENST00000393551 GOLGA2Q08379 1002 aa23.59■■□□□ 1.37
PDLIM7-205ENST00000393551 CNTROBQ8N137 903 aa23.59■■□□□ 1.37
PDLIM7-205ENST00000393551 MYD88Q99836 296 aa23.59■■□□□ 1.37
PDLIM7-205ENST00000393551 MKRN1Q9UHC7 482 aaKnown RBP23.59■■□□□ 1.37
PDLIM7-205ENST00000393551 ZNRF3Q9ULT6 936 aa23.59■■□□□ 1.37
PDLIM7-205ENST00000393551 ZBTB38Q8NAP3 1195 aaPredicted RBP23.58■■□□□ 1.37
PDLIM7-205ENST00000393551 YDJCA8MPS7 323 aa23.57■■□□□ 1.36
PDLIM7-205ENST00000393551 CCDC30Q5VVM6 783 aa23.57■■□□□ 1.36
PDLIM7-205ENST00000393551 TMC4Q7Z404 712 aa23.57■■□□□ 1.36
PDLIM7-205ENST00000393551 LMOD1P29536 600 aaPredicted RBP23.56■■□□□ 1.36
PDLIM7-205ENST00000393551 COL13A1Q5TAT6 717 aaPredicted RBP23.56■■□□□ 1.36
PDLIM7-205ENST00000393551 JARID2Q92833 1246 aaPredicted RBP23.56■■□□□ 1.36
PDLIM7-205ENST00000393551 METTL22Q9BUU2 404 aaPredicted RBP23.56■■□□□ 1.36
PDLIM7-205ENST00000393551 GPRC5DQ9NZD1 345 aa23.56■■□□□ 1.36
PDLIM7-205ENST00000393551 CNTNAP1P78357 1384 aa23.55■■□□□ 1.36
PDLIM7-205ENST00000393551 ZNF316A6NFI3 1004 aaPredicted RBP23.55■■□□□ 1.36
PDLIM7-205ENST00000393551 TMEM88BA6NKF7 163 aa23.55■■□□□ 1.36
PDLIM7-205ENST00000393551 FMR1Q06787 632 aaKnown RBP eCLIP23.55■■□□□ 1.36
PDLIM7-205ENST00000393551 CCDC191Q8NCU4 936 aa23.55■■□□□ 1.36
PDLIM7-205ENST00000393551 MRS2Q9HD23 443 aa23.55■■□□□ 1.36
PDLIM7-205ENST00000393551 SEC31BQ9NQW1 1179 aa23.55■■□□□ 1.36
PDLIM7-205ENST00000393551 HSPA1AP0DMV8 641 aaKnown RBP23.54■■□□□ 1.36
PDLIM7-205ENST00000393551 HSPA1BP0DMV9 641 aaKnown RBP23.54■■□□□ 1.36
PDLIM7-205ENST00000393551 GPSM2P81274 684 aa23.54■■□□□ 1.36
PDLIM7-205ENST00000393551 POLLQ9UGP5 575 aa23.54■■□□□ 1.36
PDLIM7-205ENST00000393551 MAP3K2Q9Y2U5 619 aa23.54■■□□□ 1.36
PDLIM7-205ENST00000393551 RAD17O75943 681 aa23.53■■□□□ 1.36
PDLIM7-205ENST00000393551 PCCAP05165 728 aaPredicted RBP23.53■■□□□ 1.36
PDLIM7-205ENST00000393551 GMPSP49915 693 aaPredicted RBP23.53■■□□□ 1.36
PDLIM7-205ENST00000393551 USP50Q70EL3 339 aaPredicted RBP23.53■■□□□ 1.36
PDLIM7-205ENST00000393551 NSFL1CQ9UNZ2 370 aaKnown RBP23.53■■□□□ 1.36
PDLIM7-205ENST00000393551 IGKV5-2P06315 115 aa23.52■■□□□ 1.36
PDLIM7-205ENST00000393551 RPS8P62241 208 aaKnown RBP23.52■■□□□ 1.36
PDLIM7-205ENST00000393551 NCBP3Q53F19 620 aaKnown RBP23.52■■□□□ 1.36
PDLIM7-205ENST00000393551 CIAPIN1Q6FI81 312 aa23.52■■□□□ 1.36
PDLIM7-205ENST00000393551 G2E3Q7L622 706 aa23.52■■□□□ 1.36
PDLIM7-205ENST00000393551 CWC25Q9NXE8 425 aaPredicted RBP23.52■■□□□ 1.36
PDLIM7-205ENST00000393551 PI4KAP2A4QPH2 592 aa23.51■■□□□ 1.35
PDLIM7-205ENST00000393551 TWISTNBQ3B726 338 aaPredicted RBP23.51■■□□□ 1.35
PDLIM7-205ENST00000393551 KSR2Q6VAB6 950 aa23.51■■□□□ 1.35
PDLIM7-205ENST00000393551 PI4KAP1Q8N8J0 262 aa23.51■■□□□ 1.35
PDLIM7-205ENST00000393551 IL16Q14005 1332 aa23.51■■□□□ 1.35
PDLIM7-205ENST00000393551 SHTN1A0MZ66 631 aa23.5■■□□□ 1.35
PDLIM7-205ENST00000393551 DDX58O95786 925 aaKnown RBP23.5■■□□□ 1.35
PDLIM7-205ENST00000393551 VEGFBP49765 207 aa23.5■■□□□ 1.35
PDLIM7-205ENST00000393551 WASHC4Q2M389 1173 aa23.5■■□□□ 1.35
PDLIM7-205ENST00000393551 GPR101Q96P66 508 aaPredicted RBP23.5■■□□□ 1.35
PDLIM7-205ENST00000393551 ADARB2Q9NS39 739 aaKnown RBP23.5■■□□□ 1.35
PDLIM7-205ENST00000393551 RIMBP2O15034 1052 aa23.49■■□□□ 1.35
PDLIM7-205ENST00000393551 ANP32CO43423 234 aa23.49■■□□□ 1.35
PDLIM7-205ENST00000393551 PDE8AO60658 829 aa23.49■■□□□ 1.35
PDLIM7-205ENST00000393551 CHMP4AQ9BY43 222 aa23.49■■□□□ 1.35
PDLIM7-205ENST00000393551 DBNDD1Q9H9R9 158 aa23.49■■□□□ 1.35
PDLIM7-205ENST00000393551 TRPM7Q96QT4 1865 aa23.49■■□□□ 1.35
PDLIM7-205ENST00000393551 SCN9AQ15858 1988 aa23.49■■□□□ 1.35
PDLIM7-205ENST00000393551 TRAF5O00463 557 aa23.48■■□□□ 1.35
PDLIM7-205ENST00000393551 HIRAP54198 1017 aaPredicted RBP23.48■■□□□ 1.35
PDLIM7-205ENST00000393551 TBC1D16Q8TBP0 767 aa23.48■■□□□ 1.35
PDLIM7-205ENST00000393551 CCDC85AQ96PX6 553 aaPredicted RBP23.48■■□□□ 1.35
PDLIM7-205ENST00000393551 KCNQ5Q9NR82 932 aa23.48■■□□□ 1.35
PDLIM7-205ENST00000393551 RASSF10A6NK89 507 aa23.47■■□□□ 1.35
PDLIM7-205ENST00000393551 C6orf229H3BNL8 230 aa23.47■■□□□ 1.35
PDLIM7-205ENST00000393551 SLC4A2P04920 1241 aa23.47■■□□□ 1.35
PDLIM7-205ENST00000393551 TNIP1Q15025 636 aa23.47■■□□□ 1.35
PDLIM7-205ENST00000393551 STK31Q9BXU1 1019 aa23.47■■□□□ 1.35
PDLIM7-205ENST00000393551 PODXL2Q9NZ53 605 aa23.47■■□□□ 1.35
PDLIM7-205ENST00000393551 SALL2Q9Y467 1007 aaPredicted RBP23.47■■□□□ 1.35
PDLIM7-205ENST00000393551 CDHR2Q9BYE9 1310 aa23.47■■□□□ 1.35
PDLIM7-205ENST00000393551 FANCIQ9NVI1 1328 aa23.47■■□□□ 1.35
PDLIM7-205ENST00000393551 MYH3P11055 1940 aa23.47■■□□□ 1.35
PDLIM7-205ENST00000393551 CWF19L2Q2TBE0 894 aaKnown RBP23.46■■□□□ 1.35
PDLIM7-205ENST00000393551 CCDC152Q4G0S7 254 aa23.46■■□□□ 1.35
PDLIM7-205ENST00000393551 CST9Q5W186 159 aa23.46■■□□□ 1.35
PDLIM7-205ENST00000393551 TRPM4Q8TD43 1214 aa23.46■■□□□ 1.35
PDLIM7-205ENST00000393551 PGAP2Q9UHJ9 254 aa23.46■■□□□ 1.35
PDLIM7-205ENST00000393551 ZBTB12Q9Y330 459 aaPredicted RBP23.46■■□□□ 1.35
PDLIM7-205ENST00000393551 CACNA1FO60840 1977 aa23.45■■□□□ 1.35
PDLIM7-205ENST00000393551 RTL9Q8NET4 1388 aa23.45■■□□□ 1.34
PDLIM7-205ENST00000393551 PSMD14O00487 310 aa23.45■■□□□ 1.34
PDLIM7-205ENST00000393551 HSP90B1P14625 803 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms