RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 GPT2Q8TD30 523 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 KIF20BQ96Q89 1820 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 PHKG2P15735 406 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 RRP12Q5JTH9 1297 aaKnown RBP12.42□□□□□ -0.42
CALD1-203ENST00000393118 CHST3Q7LGC8 479 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 UBE2HP62256 183 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 ADCK5Q3MIX3 580 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 SYNE3Q6ZMZ3 975 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 RUFY3Q7L099 469 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 ZNF594Q96JF6 807 aaPredicted RBP12.42□□□□□ -0.42
CALD1-203ENST00000393118 DYNC1I1O14576 645 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 HSP90AB3PQ58FF7 597 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 PI4K2BQ8TCG2 481 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 ZNF592Q92610 1267 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 STARD3NLO95772 234 aa12.41□□□□□ -0.42
CALD1-203ENST00000393118 IFIT5Q13325 482 aaKnown RBP12.41□□□□□ -0.42
CALD1-203ENST00000393118 U3KPZ7 1027 aaPredicted RBP12.41□□□□□ -0.42
CALD1-203ENST00000393118 A0A0D9SFI3 127 aa12.41□□□□□ -0.42
CALD1-203ENST00000393118 PDCL2Q8N4E4 241 aa12.41□□□□□ -0.42
CALD1-203ENST00000393118 CEP170BQ9Y4F5 1589 aaPredicted RBP12.41□□□□□ -0.42
CALD1-203ENST00000393118 VPS53Q5VIR6 699 aa12.41□□□□□ -0.42
CALD1-203ENST00000393118 ZNF830Q96NB3 372 aaPredicted RBP12.41□□□□□ -0.42
CALD1-203ENST00000393118 ERBB3P21860 1342 aa12.41□□□□□ -0.42
CALD1-203ENST00000393118 SLC27A2O14975 620 aa12.4□□□□□ -0.42
CALD1-203ENST00000393118 NRDCO43847 1150 aa12.4□□□□□ -0.42
CALD1-203ENST00000393118 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
CALD1-203ENST00000393118 MAP3K11Q16584 847 aa12.4□□□□□ -0.42
CALD1-203ENST00000393118 TNNI3KQ59H18 835 aa12.4□□□□□ -0.42
CALD1-203ENST00000393118 TBC1D2BQ9UPU7 963 aa12.4□□□□□ -0.42
CALD1-203ENST00000393118 FPGT-TNNI3KV9GXZ4 949 aa12.4□□□□□ -0.42
CALD1-203ENST00000393118 ATP2B1P20020 1258 aa12.4□□□□□ -0.42
CALD1-203ENST00000393118 POLA2Q14181 598 aa12.4□□□□□ -0.42
CALD1-203ENST00000393118 Q6ZUG5 572 aa12.4□□□□□ -0.42
CALD1-203ENST00000393118 LSG1Q9H089 658 aaKnown RBP12.4□□□□□ -0.42
CALD1-203ENST00000393118 NSFL1CQ9UNZ2 370 aaKnown RBP12.4□□□□□ -0.42
CALD1-203ENST00000393118 ANKARQ7Z5J8 1434 aa12.4□□□□□ -0.43
CALD1-203ENST00000393118 ERBB4Q15303 1308 aa12.4□□□□□ -0.43
CALD1-203ENST00000393118 HMGN5P82970 282 aaKnown RBP12.4□□□□□ -0.43
CALD1-203ENST00000393118 TRIM29Q14134 588 aa12.4□□□□□ -0.43
CALD1-203ENST00000393118 MCMDC2Q4G0Z9 681 aa12.4□□□□□ -0.43
CALD1-203ENST00000393118 LDHAL6AQ6ZMR3 332 aa12.4□□□□□ -0.43
CALD1-203ENST00000393118 VPS37DQ86XT2 251 aa12.4□□□□□ -0.43
CALD1-203ENST00000393118 SEC62Q99442 399 aaKnown RBP12.4□□□□□ -0.43
CALD1-203ENST00000393118 TRMT112Q9UI30 125 aaKnown RBP12.4□□□□□ -0.43
CALD1-203ENST00000393118 CCDC66A2RUB6 948 aa12.39□□□□□ -0.43
CALD1-203ENST00000393118 NUTM2BA6NNL0 878 aaPredicted RBP12.39□□□□□ -0.43
CALD1-203ENST00000393118 NUTM2EB1AL46 878 aaPredicted RBP12.39□□□□□ -0.43
CALD1-203ENST00000393118 STK38Q15208 465 aa12.39□□□□□ -0.43
CALD1-203ENST00000393118 NUTM2AQ8IVF1 878 aaPredicted RBP12.39□□□□□ -0.43
CALD1-203ENST00000393118 CHMP4CQ96CF2 233 aa12.39□□□□□ -0.43
CALD1-203ENST00000393118 IL25Q9H293 177 aa12.39□□□□□ -0.43
CALD1-203ENST00000393118 ZNF445P59923 1031 aa12.39□□□□□ -0.43
CALD1-203ENST00000393118 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
CALD1-203ENST00000393118 FAM89AQ96GI7 184 aa12.39□□□□□ -0.43
CALD1-203ENST00000393118 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
CALD1-203ENST00000393118 SCAND2PQ9GZW5 306 aaPredicted RBP12.39□□□□□ -0.43
CALD1-203ENST00000393118 HMG20BQ9P0W2 317 aa12.39□□□□□ -0.43
CALD1-203ENST00000393118 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.38□□□□□ -0.43
CALD1-203ENST00000393118 PAG1Q9NWQ8 432 aa12.38□□□□□ -0.43
CALD1-203ENST00000393118 SASH1O94885 1247 aa12.38□□□□□ -0.43
CALD1-203ENST00000393118 ADCY5O95622 1261 aa12.38□□□□□ -0.43
CALD1-203ENST00000393118 ME3Q16798 604 aa12.38□□□□□ -0.43
CALD1-203ENST00000393118 IMMTQ16891 758 aaKnown RBP12.38□□□□□ -0.43
CALD1-203ENST00000393118 CCDC94Q9BW85 323 aaPredicted RBP12.38□□□□□ -0.43
CALD1-203ENST00000393118 ADAMTS2O95450 1211 aa12.38□□□□□ -0.43
CALD1-203ENST00000393118 IL2RBP14784 551 aa12.38□□□□□ -0.43
CALD1-203ENST00000393118 TSC1Q92574 1164 aa12.38□□□□□ -0.43
CALD1-203ENST00000393118 PLBD2Q8NHP8 589 aa12.37□□□□□ -0.43
CALD1-203ENST00000393118 CFAP45Q9UL16 551 aa12.37□□□□□ -0.43
CALD1-203ENST00000393118 ZDHHC9Q9Y397 364 aa12.37□□□□□ -0.43
CALD1-203ENST00000393118 TMEM94Q12767 1356 aa12.37□□□□□ -0.43
CALD1-203ENST00000393118 CTNNA3Q9UI47 895 aa12.37□□□□□ -0.43
CALD1-203ENST00000393118 AKAP2Q9Y2D5 859 aa12.37□□□□□ -0.43
CALD1-203ENST00000393118 NPHP4O75161 1426 aaPredicted RBP12.37□□□□□ -0.43
CALD1-203ENST00000393118 IL15P40933 162 aaPredicted RBP12.37□□□□□ -0.43
CALD1-203ENST00000393118 TPM4P67936 248 aa12.37□□□□□ -0.43
CALD1-203ENST00000393118 EPHA10Q5JZY3 1008 aa12.37□□□□□ -0.43
CALD1-203ENST00000393118 LARGE1O95461 756 aa12.37□□□□□ -0.43
CALD1-203ENST00000393118 IGKV5-2P06315 115 aa12.37□□□□□ -0.43
CALD1-203ENST00000393118 ZNF396Q96N95 335 aaPredicted RBP12.37□□□□□ -0.43
CALD1-203ENST00000393118 CREBRFQ8IUR6 639 aa12.36□□□□□ -0.43
CALD1-203ENST00000393118 DACT1Q9NYF0 836 aa12.36□□□□□ -0.43
CALD1-203ENST00000393118 ADCY9O60503 1353 aa12.36□□□□□ -0.43
CALD1-203ENST00000393118 DIP2AQ14689 1571 aa12.36□□□□□ -0.43
CALD1-203ENST00000393118 RGS12O14924 1447 aa12.36□□□□□ -0.43
CALD1-203ENST00000393118 DHX16O60231 1041 aaKnown RBP12.36□□□□□ -0.43
CALD1-203ENST00000393118 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
CALD1-203ENST00000393118 APOBRQ0VD83 1088 aa12.36□□□□□ -0.43
CALD1-203ENST00000393118 CUL4AQ13619 759 aa12.36□□□□□ -0.43
CALD1-203ENST00000393118 NRKQ7Z2Y5 1582 aa12.36□□□□□ -0.43
CALD1-203ENST00000393118 SSH2Q76I76 1423 aa12.36□□□□□ -0.43
CALD1-203ENST00000393118 DBNLQ9UJU6 430 aaKnown RBP12.36□□□□□ -0.43
CALD1-203ENST00000393118 TPCN1Q9ULQ1 816 aa12.36□□□□□ -0.43
CALD1-203ENST00000393118 ITSN1Q15811 1721 aa12.36□□□□□ -0.43
CALD1-203ENST00000393118 A0A1B0GUL7 405 aa12.35□□□□□ -0.43
CALD1-203ENST00000393118 RPS6KB1P23443 525 aa12.35□□□□□ -0.43
CALD1-203ENST00000393118 CCDC82Q8N4S0 544 aa12.35□□□□□ -0.43
CALD1-203ENST00000393118 CDC37L1Q7L3B6 337 aa12.35□□□□□ -0.43
CALD1-203ENST00000393118 ZNF589Q86UQ0 364 aaPredicted RBP12.35□□□□□ -0.43
CALD1-203ENST00000393118 HELBQ8NG08 1087 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms