RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 RAPGEF1Q13905 1077 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 CCDC70Q6NSX1 233 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 TNIP3Q96KP6 325 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 LEMD3Q9Y2U8 911 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 KDM2BQ8NHM5 1336 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 BACH1O14867 736 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 RASGRP1O95267 797 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 POLR3DP05423 398 aaPredicted RBP4.37□□□□□ -1.71
XRN1-202ENST00000392981 GINM1Q9NU53 330 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 HCN4Q9Y3Q4 1203 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 GTF2E1P29083 439 aaPredicted RBP4.37□□□□□ -1.71
XRN1-202ENST00000392981 GNALP38405 381 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 GLIPR1L2Q4G1C9 344 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 IL17RAQ96F46 866 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 KANSL2Q9H9L4 492 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 GEMIN8Q9NWZ8 242 aaKnown RBP4.37□□□□□ -1.71
XRN1-202ENST00000392981 LRP2BPQ9P2M1 347 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 TPX2Q9ULW0 747 aaKnown RBP4.37□□□□□ -1.71
XRN1-202ENST00000392981 AK5Q9Y6K8 562 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 FGRP09769 529 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 NEK4P51957 841 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 CLUL1Q15846 466 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 BRDTQ58F21 947 aaPredicted RBP4.37□□□□□ -1.71
XRN1-202ENST00000392981 ARSHQ5FYA8 562 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 STAC3Q96MF2 364 aa4.37□□□□□ -1.71
XRN1-202ENST00000392981 SRRTQ9BXP5 876 aaKnown RBP4.37□□□□□ -1.71
XRN1-202ENST00000392981 POLD1P28340 1107 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 MASP1P48740 699 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 TCIRG1Q13488 830 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 TRIM14Q14142 442 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 PLA2G4EQ3MJ16 856 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 SEZ6Q53EL9 994 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 IL31Q6EBC2 164 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 RPUSD2Q8IZ73 545 aaKnown RBP4.36□□□□□ -1.71
XRN1-202ENST00000392981 TSPAN10Q9H1Z9 355 aaPredicted RBP4.36□□□□□ -1.71
XRN1-202ENST00000392981 TMEM92Q6UXU6 159 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 HSCBQ8IWL3 235 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 ACTR10Q9NZ32 417 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 IP6K2Q9UHH9 426 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 ZNF180Q9UJW8 692 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 PPT2Q9UMR5 302 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 SLC27A5Q9Y2P5 690 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 ARHGAP29Q52LW3 1261 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 PARD3BQ8TEW8 1205 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 GPR101Q96P66 508 aaPredicted RBP4.36□□□□□ -1.71
XRN1-202ENST00000392981 BRINP2Q9C0B6 783 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 FAM86C1Q9NVL1 165 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 FAM198AQ9UFP1 575 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 SHTN1A0MZ66 631 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 STAU1O95793 577 aaKnown RBP4.36□□□□□ -1.71
XRN1-202ENST00000392981 COL9A1P20849 921 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 GRM1Q13255 1194 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 SART3Q15020 963 aaKnown RBP4.36□□□□□ -1.71
XRN1-202ENST00000392981 STAG1Q8WVM7 1258 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 ATP6V1E2Q96A05 226 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 AIDAQ96BJ3 306 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 EYA1Q99502 592 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 SMC4Q9NTJ3 1288 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 KIF3CO14782 793 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 NEK3P51956 506 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 DGKZQ13574 1117 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 CCDC174Q6PII3 467 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 GK5Q6ZS86 529 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 DDX42Q86XP3 938 aaKnown RBP eCLIP4.36□□□□□ -1.71
XRN1-202ENST00000392981 FBF1Q8TES7 1133 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 SCYL1Q96KG9 808 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 CSRNP1Q96S65 589 aa4.36□□□□□ -1.71
XRN1-202ENST00000392981 TNFRSF10BO14763 440 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 TSPAN6O43657 245 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 TEX19Q8NA77 164 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 NUDT16Q96DE0 195 aaKnown RBP4.35□□□□□ -1.71
XRN1-202ENST00000392981 CITED4Q96RK1 184 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 NUDT12Q9BQG2 462 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 CABP1Q9NZU7 370 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 KIAA1468Q9P260 1216 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 MAPK8IP1Q9UQF2 711 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 GOLGA8CPA6NN73 597 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 CPNE3O75131 537 aaKnown RBP4.35□□□□□ -1.71
XRN1-202ENST00000392981 SLC10A3P09131 477 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 RAB33AQ14088 237 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 MLC1Q15049 377 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 KHSRPQ92945 711 aaKnown RBP eCLIP4.35□□□□□ -1.711e-6■■■■■ 30.3
XRN1-202ENST00000392981 RCAN3Q9UKA8 241 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 RIMBP2O15034 1052 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 PDPK1O15530 556 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 IRS1P35568 1242 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 ZAP70P43403 619 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 MAPK9P45984 424 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 NXPE4Q6UWF7 544 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 EPS8L3Q8TE67 593 aaKnown RBP4.35□□□□□ -1.71
XRN1-202ENST00000392981 C8orf48Q96LL4 319 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 USB1Q9BQ65 265 aaKnown RBP4.35□□□□□ -1.71
XRN1-202ENST00000392981 PHACTR2O75167 634 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 RAB27AP51159 221 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 CLCN6P51797 869 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 FAM193AP78312 1265 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 TTC39BQ5VTQ0 682 aaPredicted RBP4.35□□□□□ -1.71
XRN1-202ENST00000392981 USPL1Q5W0Q7 1092 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 RNF19BQ6ZMZ0 732 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 SLC7A3Q8WY07 619 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms