RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 DALRD3Q5D0E6 543 aaKnown RBP8.55□□□□□ -1.04
UBBP1-201ENST00000392399 ZKSCAN2Q63HK3 967 aa8.55□□□□□ -1.04
UBBP1-201ENST00000392399 FRAT1Q92837 279 aaPredicted RBP8.55□□□□□ -1.04
UBBP1-201ENST00000392399 C9orf78Q9NZ63 289 aaPredicted RBP8.55□□□□□ -1.04
UBBP1-201ENST00000392399 RCAN3Q9UKA8 241 aa8.55□□□□□ -1.04
UBBP1-201ENST00000392399 HDAC5Q9UQL6 1122 aa8.55□□□□□ -1.04
UBBP1-201ENST00000392399 ANKRD36CQ5JPF3 1778 aa8.55□□□□□ -1.04
UBBP1-201ENST00000392399 ARFGEF2Q9Y6D5 1785 aa8.55□□□□□ -1.04
UBBP1-201ENST00000392399 UTRNP46939 3433 aa8.55□□□□□ -1.04
UBBP1-201ENST00000392399 ABCC12Q96J65 1359 aa8.54□□□□□ -1.04
UBBP1-201ENST00000392399 C19orf67A6NJJ6 358 aa8.54□□□□□ -1.04
UBBP1-201ENST00000392399 GRM8O00222 908 aa8.54□□□□□ -1.04
UBBP1-201ENST00000392399 HCLS1P14317 486 aaPredicted RBP8.54□□□□□ -1.04
UBBP1-201ENST00000392399 INTS3Q68E01 1043 aaKnown RBP8.54□□□□□ -1.04
UBBP1-201ENST00000392399 SYNE4Q8N205 404 aa8.54□□□□□ -1.04
UBBP1-201ENST00000392399 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.54□□□□□ -1.04
UBBP1-201ENST00000392399 RPGRQ92834 1020 aaKnown RBP8.54□□□□□ -1.04
UBBP1-201ENST00000392399 ZNF622Q969S3 477 aaKnown RBP eCLIP8.54□□□□□ -1.04
UBBP1-201ENST00000392399 RBM17Q96I25 401 aaKnown RBP8.54□□□□□ -1.04
UBBP1-201ENST00000392399 CRAMP1Q96RY5 1269 aa8.54□□□□□ -1.04
UBBP1-201ENST00000392399 PLA2G12BQ9BX93 195 aa8.54□□□□□ -1.04
UBBP1-201ENST00000392399 UTYO14607 1347 aa8.54□□□□□ -1.04
UBBP1-201ENST00000392399 BBOX1O75936 387 aa8.53□□□□□ -1.04
UBBP1-201ENST00000392399 CENPBP07199 599 aaPredicted RBP8.53□□□□□ -1.04
UBBP1-201ENST00000392399 TRIM27P14373 513 aa8.53□□□□□ -1.04
UBBP1-201ENST00000392399 CASP7P55210 303 aa8.53□□□□□ -1.04
UBBP1-201ENST00000392399 CCDC152Q4G0S7 254 aa8.53□□□□□ -1.04
UBBP1-201ENST00000392399 GRIPAP1Q4V328 841 aa8.53□□□□□ -1.04
UBBP1-201ENST00000392399 RTL5Q5HYW3 569 aaPredicted RBP8.53□□□□□ -1.04
UBBP1-201ENST00000392399 SOGA3Q5TF21 947 aa8.53□□□□□ -1.04
UBBP1-201ENST00000392399 CC2D2BQ6DHV5 1058 aa8.53□□□□□ -1.04
UBBP1-201ENST00000392399 DDX46Q7L014 1031 aaKnown RBP8.53□□□□□ -1.04
UBBP1-201ENST00000392399 UBE3BQ7Z3V4 1068 aa8.53□□□□□ -1.04
UBBP1-201ENST00000392399 BCS1LQ9Y276 419 aa8.53□□□□□ -1.04
UBBP1-201ENST00000392399 ABCC4O15439 1325 aa8.53□□□□□ -1.04
UBBP1-201ENST00000392399 CSF1RP07333 972 aa8.52□□□□□ -1.05
UBBP1-201ENST00000392399 TMC4Q7Z404 712 aa8.52□□□□□ -1.05
UBBP1-201ENST00000392399 PELP1Q8IZL8 1130 aaKnown RBP8.52□□□□□ -1.05
UBBP1-201ENST00000392399 USP44Q9H0E7 712 aa8.52□□□□□ -1.05
UBBP1-201ENST00000392399 TMX4Q9H1E5 349 aaPredicted RBP8.52□□□□□ -1.05
UBBP1-201ENST00000392399 GNAI3P08754 354 aa8.51□□□□□ -1.05
UBBP1-201ENST00000392399 YBX3P16989 372 aaKnown RBP eCLIP8.51□□□□□ -1.05
UBBP1-201ENST00000392399 CTSWP56202 376 aa8.51□□□□□ -1.05
UBBP1-201ENST00000392399 GRAPQ13588 217 aa8.51□□□□□ -1.05
UBBP1-201ENST00000392399 PRPF40BQ6NWY9 871 aaKnown RBP8.51□□□□□ -1.05
UBBP1-201ENST00000392399 C3orf67Q6ZVT6 689 aa8.51□□□□□ -1.05
UBBP1-201ENST00000392399 FTSJ3Q8IY81 847 aaKnown RBP8.51□□□□□ -1.05
UBBP1-201ENST00000392399 DZIP1LQ8IYY4 767 aaKnown RBP8.51□□□□□ -1.05
UBBP1-201ENST00000392399 TTLL11Q8NHH1 800 aa8.51□□□□□ -1.05
UBBP1-201ENST00000392399 GRAPLQ8TC17 118 aaPredicted RBP8.51□□□□□ -1.05
UBBP1-201ENST00000392399 C7orf43Q8WVR3 580 aa8.51□□□□□ -1.05
UBBP1-201ENST00000392399 ANKRD31Q8N7Z5 1873 aa8.51□□□□□ -1.05
UBBP1-201ENST00000392399 RTL9Q8NET4 1388 aa8.5□□□□□ -1.05
UBBP1-201ENST00000392399 NBPF7P0C2Y1 421 aaPredicted RBP8.5□□□□□ -1.05
UBBP1-201ENST00000392399 RPS8P62241 208 aaKnown RBP8.5□□□□□ -1.05
UBBP1-201ENST00000392399 FOXO4P98177 505 aa8.5□□□□□ -1.05
UBBP1-201ENST00000392399 PDE3AQ14432 1141 aa8.5□□□□□ -1.05
UBBP1-201ENST00000392399 RTKN2Q8IZC4 609 aa8.5□□□□□ -1.05
UBBP1-201ENST00000392399 JARID2Q92833 1246 aaPredicted RBP8.5□□□□□ -1.05
UBBP1-201ENST00000392399 CLUAP1Q96AJ1 413 aa8.5□□□□□ -1.05
UBBP1-201ENST00000392399 CDC5LQ99459 802 aaKnown RBP8.5□□□□□ -1.05
UBBP1-201ENST00000392399 CHMP4BQ9H444 224 aaKnown RBP8.5□□□□□ -1.05
UBBP1-201ENST00000392399 KIAA1551Q9HCM1 1747 aa8.5□□□□□ -1.05
UBBP1-201ENST00000392399 N4BP2Q86UW6 1770 aaPredicted RBP8.5□□□□□ -1.05
UBBP1-201ENST00000392399 C21orf2O43822 256 aa8.49□□□□□ -1.05
UBBP1-201ENST00000392399 UBTFL1P0CB47 393 aaPredicted RBP8.49□□□□□ -1.05
UBBP1-201ENST00000392399 RABL6Q3YEC7 729 aaPredicted RBP8.49□□□□□ -1.05
UBBP1-201ENST00000392399 CCDC93Q567U6 631 aa8.49□□□□□ -1.05
UBBP1-201ENST00000392399 LMBR1LQ6UX01 489 aa8.49□□□□□ -1.05
UBBP1-201ENST00000392399 ARHGAP27Q6ZUM4 889 aa8.49□□□□□ -1.05
UBBP1-201ENST00000392399 SP8Q8IXZ3 490 aa8.49□□□□□ -1.05
UBBP1-201ENST00000392399 TMEM57Q8N5G2 664 aa8.49□□□□□ -1.05
UBBP1-201ENST00000392399 ATP6V0A2Q9Y487 856 aa8.49□□□□□ -1.05
UBBP1-201ENST00000392399 ANKRD18BA2A2Z9 1011 aa8.48□□□□□ -1.05
UBBP1-201ENST00000392399 PPEF1O14829 653 aaPredicted RBP8.48□□□□□ -1.05
UBBP1-201ENST00000392399 ITGA6P23229 1130 aa8.48□□□□□ -1.05
UBBP1-201ENST00000392399 IFIT5Q13325 482 aaKnown RBP8.48□□□□□ -1.05
UBBP1-201ENST00000392399 CCDC57Q2TAC2 916 aa8.48□□□□□ -1.05
UBBP1-201ENST00000392399 ANKRD18AQ8IVF6 992 aa8.48□□□□□ -1.05
UBBP1-201ENST00000392399 KAZALD1Q96I82 304 aa8.48□□□□□ -1.05
UBBP1-201ENST00000392399 SUCLG2Q96I99 432 aa8.48□□□□□ -1.05
UBBP1-201ENST00000392399 VPS33BQ9H267 617 aa8.48□□□□□ -1.05
UBBP1-201ENST00000392399 GREM2Q9H772 168 aa8.48□□□□□ -1.05
UBBP1-201ENST00000392399 BSDC1Q9NW68 430 aaPredicted RBP8.48□□□□□ -1.05
UBBP1-201ENST00000392399 WWC3Q9ULE0 1092 aa8.48□□□□□ -1.05
UBBP1-201ENST00000392399 BRCA1P38398 1863 aaKnown RBP8.48□□□□□ -1.05
UBBP1-201ENST00000392399 LTBP3Q9NS15 1303 aa8.48□□□□□ -1.05
UBBP1-201ENST00000392399 DLEC1Q9Y238 1755 aa8.48□□□□□ -1.05
UBBP1-201ENST00000392399 DDX60Q8IY21 1712 aaKnown RBP8.47□□□□□ -1.05
UBBP1-201ENST00000392399 ZBTB7BO15156 539 aaPredicted RBP8.47□□□□□ -1.05
UBBP1-201ENST00000392399 GNAI2P04899 355 aa8.47□□□□□ -1.05
UBBP1-201ENST00000392399 IGHMBP2P38935 993 aaKnown RBP8.47□□□□□ -1.05
UBBP1-201ENST00000392399 FKBP4Q02790 459 aaKnown RBP eCLIP8.47□□□□□ -1.05
UBBP1-201ENST00000392399 EPHA10Q5JZY3 1008 aa8.47□□□□□ -1.05
UBBP1-201ENST00000392399 SUPT20HQ8NEM7 779 aa8.47□□□□□ -1.05
UBBP1-201ENST00000392399 CELF1Q92879 486 aaKnown RBP8.47□□□□□ -1.05
UBBP1-201ENST00000392399 PSMD1Q99460 953 aa8.47□□□□□ -1.05
UBBP1-201ENST00000392399 MEIS3Q99687 375 aa8.47□□□□□ -1.05
UBBP1-201ENST00000392399 BICC1Q9H694 974 aaKnown RBP8.47□□□□□ -1.05
UBBP1-201ENST00000392399 SEC31BQ9NQW1 1179 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms