RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 EPB41L2O43491 1005 aaKnown RBP25.57■■□□□ 1.68
SPTBN4-203ENST00000392023 CUL4AQ13619 759 aa25.57■■□□□ 1.68
SPTBN4-203ENST00000392023 SEC62Q99442 399 aaKnown RBP25.57■■□□□ 1.68
SPTBN4-203ENST00000392023 TAF6LQ9Y6J9 622 aa25.57■■□□□ 1.68
SPTBN4-203ENST00000392023 DISP2A7MBM2 1401 aa25.56■■□□□ 1.68
SPTBN4-203ENST00000392023 NECTIN1Q15223 517 aa25.56■■□□□ 1.68
SPTBN4-203ENST00000392023 TTC14Q96N46 770 aa25.56■■□□□ 1.68
SPTBN4-203ENST00000392023 TBC1D2BQ9UPU7 963 aa25.56■■□□□ 1.68
SPTBN4-203ENST00000392023 CCDC129Q6ZRS4 1044 aa25.55■■□□□ 1.68
SPTBN4-203ENST00000392023 RUFY3Q7L099 469 aa25.55■■□□□ 1.68
SPTBN4-203ENST00000392023 TEX13AQ9BXU3 409 aaPredicted RBP25.55■■□□□ 1.68
SPTBN4-203ENST00000392023 TJP1Q07157 1748 aa25.55■■□□□ 1.68
SPTBN4-203ENST00000392023 CYP19A1P11511 503 aaPredicted RBP25.55■■□□□ 1.68
SPTBN4-203ENST00000392023 BCL9O00512 1426 aa25.54■■□□□ 1.68
SPTBN4-203ENST00000392023 COL14A1Q05707 1796 aaKnown RBP25.54■■□□□ 1.68
SPTBN4-203ENST00000392023 CREB3L3Q68CJ9 461 aa25.54■■□□□ 1.68
SPTBN4-203ENST00000392023 MAP4K1Q92918 833 aa25.54■■□□□ 1.68
SPTBN4-203ENST00000392023 TCEANC2Q96MN5 208 aa25.54■■□□□ 1.68
SPTBN4-203ENST00000392023 COL16A1Q07092 1604 aaPredicted RBP25.54■■□□□ 1.68
SPTBN4-203ENST00000392023 GOLGA6L22H0YM25 854 aa25.53■■□□□ 1.68
SPTBN4-203ENST00000392023 EYA2O00167 538 aa25.53■■□□□ 1.68
SPTBN4-203ENST00000392023 HIP1O00291 1037 aa25.53■■□□□ 1.68
SPTBN4-203ENST00000392023 LARGE1O95461 756 aa25.53■■□□□ 1.68
SPTBN4-203ENST00000392023 CCDC57Q2TAC2 916 aa25.53■■□□□ 1.68
SPTBN4-203ENST00000392023 CLEC17AQ6ZS10 378 aa25.53■■□□□ 1.68
SPTBN4-203ENST00000392023 DDX49Q9Y6V7 483 aaKnown RBP25.52■■□□□ 1.68
SPTBN4-203ENST00000392023 NCLP19338 710 aaKnown RBP25.52■■□□□ 1.68
SPTBN4-203ENST00000392023 MAP3K15Q6ZN16 1313 aa25.51■■□□□ 1.67
SPTBN4-203ENST00000392023 GOLGA6L3A6NEY3 463 aa25.51■■□□□ 1.67
SPTBN4-203ENST00000392023 GOLIM4O00461 696 aa25.51■■□□□ 1.67
SPTBN4-203ENST00000392023 PRPF40AO75400 957 aaKnown RBP25.51■■□□□ 1.67
SPTBN4-203ENST00000392023 IL15P40933 162 aaPredicted RBP25.51■■□□□ 1.67
SPTBN4-203ENST00000392023 GIGYF2Q6Y7W6 1299 aaKnown RBP25.51■■□□□ 1.67
SPTBN4-203ENST00000392023 PDRG1Q9NUG6 133 aa25.51■■□□□ 1.67
SPTBN4-203ENST00000392023 A0A1B0GUL7 405 aa25.5■■□□□ 1.67
SPTBN4-203ENST00000392023 SLC27A2O14975 620 aa25.5■■□□□ 1.67
SPTBN4-203ENST00000392023 DDB1Q16531 1140 aa25.5■■□□□ 1.67
SPTBN4-203ENST00000392023 HAUS7Q99871 368 aa25.5■■□□□ 1.67
SPTBN4-203ENST00000392023 ZKSCAN1P17029 563 aaPredicted RBP25.49■■□□□ 1.67
SPTBN4-203ENST00000392023 INTS4Q96HW7 963 aaKnown RBP25.49■■□□□ 1.67
SPTBN4-203ENST00000392023 LIMCH1Q9UPQ0 1083 aa25.49■■□□□ 1.67
SPTBN4-203ENST00000392023 FAM177BA6PVY3 158 aa25.48■■□□□ 1.67
SPTBN4-203ENST00000392023 ZBTB38Q8NAP3 1195 aaPredicted RBP25.48■■□□□ 1.67
SPTBN4-203ENST00000392023 LMBRD1Q9NUN5 540 aa25.48■■□□□ 1.67
SPTBN4-203ENST00000392023 CYP46A1Q9Y6A2 500 aa25.48■■□□□ 1.67
SPTBN4-203ENST00000392023 TAF5LO75529 589 aa25.47■■□□□ 1.67
SPTBN4-203ENST00000392023 PCCAP05165 728 aaPredicted RBP25.47■■□□□ 1.67
SPTBN4-203ENST00000392023 XRCC6P12956 609 aaKnown RBP eCLIP25.47■■□□□ 1.67
SPTBN4-203ENST00000392023 TAF7LQ5H9L4 462 aa25.47■■□□□ 1.67
SPTBN4-203ENST00000392023 SPATA31A1Q5TZJ5 1347 aa25.47■■□□□ 1.67
SPTBN4-203ENST00000392023 NLRP10Q86W26 655 aa25.47■■□□□ 1.67
SPTBN4-203ENST00000392023 ZSWIM6Q9HCJ5 1215 aa25.47■■□□□ 1.67
SPTBN4-203ENST00000392023 GAS2L3Q86XJ1 694 aa25.47■■□□□ 1.67
SPTBN4-203ENST00000392023 PANK2Q9BZ23 570 aa25.47■■□□□ 1.67
SPTBN4-203ENST00000392023 SNRKQ9NRH2 765 aa25.47■■□□□ 1.67
SPTBN4-203ENST00000392023 MED23Q9ULK4 1368 aa25.46■■□□□ 1.67
SPTBN4-203ENST00000392023 BRD1O95696 1058 aa25.46■■□□□ 1.67
SPTBN4-203ENST00000392023 ADORA1P30542 326 aa25.46■■□□□ 1.67
SPTBN4-203ENST00000392023 SKOR2Q2VWA4 1001 aaPredicted RBP25.46■■□□□ 1.67
SPTBN4-203ENST00000392023 MARCH10Q8NA82 808 aaPredicted RBP25.46■■□□□ 1.67
SPTBN4-203ENST00000392023 CEP126Q9P2H0 1117 aa25.46■■□□□ 1.67
SPTBN4-203ENST00000392023 ZNF609O15014 1411 aa25.46■■□□□ 1.67
SPTBN4-203ENST00000392023 TRIM28Q13263 835 aaKnown RBP25.46■■□□□ 1.67
SPTBN4-203ENST00000392023 CCDC83Q8IWF9 413 aa25.46■■□□□ 1.67
SPTBN4-203ENST00000392023 AHDC1Q5TGY3 1603 aaPredicted RBP25.45■■□□□ 1.67
SPTBN4-203ENST00000392023 FSD2A1L4K1 749 aa25.45■■□□□ 1.67
SPTBN4-203ENST00000392023 DZIP3Q86Y13 1208 aaKnown RBP25.45■■□□□ 1.67
SPTBN4-203ENST00000392023 PAG1Q9NWQ8 432 aa25.45■■□□□ 1.67
SPTBN4-203ENST00000392023 TRMT112Q9UI30 125 aaKnown RBP25.45■■□□□ 1.67
SPTBN4-203ENST00000392023 IFIT5Q13325 482 aaKnown RBP25.45■■□□□ 1.66
SPTBN4-203ENST00000392023 NECAB1Q8N987 351 aa25.45■■□□□ 1.66
SPTBN4-203ENST00000392023 KCNB2Q92953 911 aa25.45■■□□□ 1.66
SPTBN4-203ENST00000392023 GREM2Q9H772 168 aa25.45■■□□□ 1.66
SPTBN4-203ENST00000392023 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.44■■□□□ 1.66
SPTBN4-203ENST00000392023 FKBP4Q02790 459 aaKnown RBP eCLIP25.44■■□□□ 1.66
SPTBN4-203ENST00000392023 IFIT1P09914 478 aaKnown RBP25.44■■□□□ 1.66
SPTBN4-203ENST00000392023 ATP6V1AP38606 617 aa25.43■■□□□ 1.66
SPTBN4-203ENST00000392023 VPS53Q5VIR6 699 aa25.43■■□□□ 1.66
SPTBN4-203ENST00000392023 KBTBD3Q8NAB2 608 aa25.43■■□□□ 1.66
SPTBN4-203ENST00000392023 KCNQ2O43526 872 aa25.43■■□□□ 1.66
SPTBN4-203ENST00000392023 GDPD2Q9HCC8 539 aa25.43■■□□□ 1.66
SPTBN4-203ENST00000392023 ITGA6P23229 1130 aa25.42■■□□□ 1.66
SPTBN4-203ENST00000392023 ME3Q16798 604 aa25.42■■□□□ 1.66
SPTBN4-203ENST00000392023 TPRNQ4KMQ1 711 aa25.42■■□□□ 1.66
SPTBN4-203ENST00000392023 GORABQ5T7V8 394 aa25.42■■□□□ 1.66
SPTBN4-203ENST00000392023 CAVIN1Q6NZI2 390 aaKnown RBP25.42■■□□□ 1.66
SPTBN4-203ENST00000392023 TTLL11Q8NHH1 800 aa25.42■■□□□ 1.66
SPTBN4-203ENST00000392023 MCMDC2Q4G0Z9 681 aa25.42■■□□□ 1.66
SPTBN4-203ENST00000392023 TPCN1Q9ULQ1 816 aa25.42■■□□□ 1.66
SPTBN4-203ENST00000392023 NSFL1CQ9UNZ2 370 aaKnown RBP25.42■■□□□ 1.66
SPTBN4-203ENST00000392023 IRS4O14654 1257 aaPredicted RBP25.41■■□□□ 1.66
SPTBN4-203ENST00000392023 CIAO1O76071 339 aa25.41■■□□□ 1.66
SPTBN4-203ENST00000392023 CSF1RP07333 972 aa25.41■■□□□ 1.66
SPTBN4-203ENST00000392023 KLHL40Q2TBA0 621 aa25.41■■□□□ 1.66
SPTBN4-203ENST00000392023 XAGE2Q96GT9 111 aa25.41■■□□□ 1.66
SPTBN4-203ENST00000392023 LTBP4Q8N2S1 1624 aa25.41■■□□□ 1.66
SPTBN4-203ENST00000392023 PI16Q6UXB8 463 aa25.41■■□□□ 1.66
SPTBN4-203ENST00000392023 TM6SF1Q9BZW5 370 aa25.41■■□□□ 1.66
SPTBN4-203ENST00000392023 GPR108Q9NPR9 543 aa25.41■■□□□ 1.66
SPTBN4-203ENST00000392023 PHLPP1O60346 1717 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms