RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 UBL7Q96S82 380 aaPredicted RBP4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 MRPL18Q9H0U6 180 aaKnown RBP4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 SMG9Q9H0W8 520 aaKnown RBP4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 ALG2Q9H553 416 aa4.22□□□□□ -1.73
RNU6-239P-201ENST00000390990 PTCD1O75127 700 aaKnown RBP4.21□□□□□ -1.74
RNU6-239P-201ENST00000390990 JAG1P78504 1218 aa4.21□□□□□ -1.74
RNU6-239P-201ENST00000390990 PCSK7Q16549 785 aa4.21□□□□□ -1.74
RNU6-239P-201ENST00000390990 C2orf49Q9BVC5 232 aaPredicted RBP4.21□□□□□ -1.74
RNU6-239P-201ENST00000390990 STOML1Q9UBI4 398 aa4.21□□□□□ -1.74
RNU6-239P-201ENST00000390990 ATAD2Q6PL18 1390 aa4.2□□□□□ -1.74
RNU6-239P-201ENST00000390990 TGFBR3LH3BV60 316 aa4.2□□□□□ -1.74
RNU6-239P-201ENST00000390990 GSC2O15499 205 aa4.2□□□□□ -1.74
RNU6-239P-201ENST00000390990 GLB1P16278 677 aa4.2□□□□□ -1.74
RNU6-239P-201ENST00000390990 INPP5BP32019 993 aa4.2□□□□□ -1.74
RNU6-239P-201ENST00000390990 GPLD1P80108 840 aa4.2□□□□□ -1.74
RNU6-239P-201ENST00000390990 SETDB1Q15047 1291 aa4.2□□□□□ -1.74
RNU6-239P-201ENST00000390990 IER5Q5VY09 327 aa4.2□□□□□ -1.74
RNU6-239P-201ENST00000390990 TRIM50Q86XT4 487 aa4.2□□□□□ -1.74
RNU6-239P-201ENST00000390990 DTX1Q86Y01 620 aa4.2□□□□□ -1.74
RNU6-239P-201ENST00000390990 ARMC10Q8N2F6 343 aa4.2□□□□□ -1.74
RNU6-239P-201ENST00000390990 ADGRE2Q9UHX3 823 aa4.2□□□□□ -1.74
RNU6-239P-201ENST00000390990 PRR19A6NJB7 356 aa4.19□□□□□ -1.74
RNU6-239P-201ENST00000390990 M0R2N6 131 aa4.19□□□□□ -1.74
RNU6-239P-201ENST00000390990 SASH3O75995 380 aa4.19□□□□□ -1.74
RNU6-239P-201ENST00000390990 DKK1O94907 266 aa4.19□□□□□ -1.74
RNU6-239P-201ENST00000390990 HIF1AQ16665 826 aa4.19□□□□□ -1.74
RNU6-239P-201ENST00000390990 STAG2Q8N3U4 1231 aa4.19□□□□□ -1.74
RNU6-239P-201ENST00000390990 IL22RA1Q8N6P7 574 aa4.19□□□□□ -1.74
RNU6-239P-201ENST00000390990 CHMP7Q8WUX9 453 aaPredicted RBP4.19□□□□□ -1.74
RNU6-239P-201ENST00000390990 J3QW42 95 aa4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 RARAP10276 462 aa4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 EIF2AK2P19525 551 aaKnown RBP4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 ATP1A2P50993 1020 aa4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 NFIAQ12857 509 aa4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 RTN1Q16799 776 aa4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 GDF6Q6KF10 455 aaPredicted RBP4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 INTS5Q6P9B9 1019 aaKnown RBP4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 LARGE2Q8N3Y3 721 aa4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 OGFOD1Q8N543 542 aa4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 GAS2L2Q8NHY3 880 aa4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 SCG3Q8WXD2 468 aaKnown RBP4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 PLD4Q96BZ4 506 aa4.18□□□□□ -1.74
RNU6-239P-201ENST00000390990 DHX15O43143 795 aaKnown RBP4.17□□□□□ -1.74
RNU6-239P-201ENST00000390990 WNT11O96014 354 aa4.17□□□□□ -1.74
RNU6-239P-201ENST00000390990 GRIK1P39086 918 aa4.17□□□□□ -1.74
RNU6-239P-201ENST00000390990 IDH3AP50213 366 aa4.17□□□□□ -1.74
RNU6-239P-201ENST00000390990 NRLP54845 237 aa4.17□□□□□ -1.74
RNU6-239P-201ENST00000390990 PLEKHM2Q8IWE5 1019 aa4.17□□□□□ -1.74
RNU6-239P-201ENST00000390990 TRIM42Q8IWZ5 723 aa4.17□□□□□ -1.74
RNU6-239P-201ENST00000390990 C7orf69Q9H7B7 122 aa4.17□□□□□ -1.74
RNU6-239P-201ENST00000390990 KLK14Q9P0G3 267 aa4.17□□□□□ -1.74
RNU6-239P-201ENST00000390990 HMX2A2RU54 273 aa4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 USP17L3A6NCW0 530 aa4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 USP17L4A6NCW7 530 aa4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 PALM3A6NDB9 673 aaPredicted RBP4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 WISP1O95388 367 aa4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 EPB42P16452 691 aa4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 RNF43Q68DV7 783 aa4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 OGFOD2Q6N063 350 aa4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 USP17L2Q6R6M4 530 aa4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 USP17L1Q7RTZ2 530 aa4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 SIX5Q8N196 739 aa4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 GALNT11Q8NCW6 608 aa4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 ZNF594Q96JF6 807 aaPredicted RBP4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 TLR7Q9NYK1 1049 aaKnown RBP4.16□□□□□ -1.74
RNU6-239P-201ENST00000390990 LOC102724428A0A0B4J2F2 783 aa4.15□□□□□ -1.75
RNU6-239P-201ENST00000390990 LGR5O75473 907 aa4.15□□□□□ -1.75
RNU6-239P-201ENST00000390990 RASA1P20936 1047 aa4.15□□□□□ -1.75
RNU6-239P-201ENST00000390990 SIK1P57059 783 aa4.15□□□□□ -1.75
RNU6-239P-201ENST00000390990 ABI1Q8IZP0 508 aa4.15□□□□□ -1.75
RNU6-239P-201ENST00000390990 ADAMTS19Q8TE59 1207 aa4.15□□□□□ -1.75
RNU6-239P-201ENST00000390990 SRA1Q9HD15 236 aaKnown RBP4.15□□□□□ -1.75
RNU6-239P-201ENST00000390990 KCNK4Q9NYG8 393 aa4.15□□□□□ -1.75
RNU6-239P-201ENST00000390990 MKRN1Q9UHC7 482 aaKnown RBP4.15□□□□□ -1.75
RNU6-239P-201ENST00000390990 TRIM33Q9UPN9 1127 aa4.15□□□□□ -1.75
RNU6-239P-201ENST00000390990 USP20Q9Y2K6 914 aa4.15□□□□□ -1.75
RNU6-239P-201ENST00000390990 COG6Q9Y2V7 657 aa4.15□□□□□ -1.75
RNU6-239P-201ENST00000390990 OPLAHO14841 1288 aa4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 TM4SF5O14894 197 aa4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 MICAL2O94851 1124 aa4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 C8AP07357 584 aa4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 ARSDP51689 593 aa4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 MCM6Q14566 821 aa4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 MAP4K3Q8IVH8 894 aa4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 SHKBP1Q8TBC3 707 aa4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 UTP4Q969X6 686 aaKnown RBP4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 FAM46AQ96IP4 442 aaKnown RBP4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 NSUN5Q96P11 429 aaKnown RBP4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 UCN2Q96RP3 112 aa4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 DBNDD2Q9BQY9 259 aa4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 C11orf16Q9NQ32 467 aa4.14□□□□□ -1.75
RNU6-239P-201ENST00000390990 ARID4AP29374 1257 aaPredicted RBP4.13□□□□□ -1.75
RNU6-239P-201ENST00000390990 HOXA10P31260 410 aaPredicted RBP4.13□□□□□ -1.75
RNU6-239P-201ENST00000390990 DGKZQ13574 1117 aa4.13□□□□□ -1.75
RNU6-239P-201ENST00000390990 KIAA1211Q6ZU35 1233 aa4.13□□□□□ -1.75
RNU6-239P-201ENST00000390990 ACAD11Q709F0 780 aa4.13□□□□□ -1.75
RNU6-239P-201ENST00000390990 RTCBQ9Y3I0 505 aaKnown RBP4.13□□□□□ -1.75
RNU6-239P-201ENST00000390990 PPME1Q9Y570 386 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms