RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 MARCKSP29966 332 aaPredicted RBP16.97■□□□□ 0.31
PSME4-201ENST00000389993 CATIPQ7Z7H3 387 aa16.97■□□□□ 0.31
PSME4-201ENST00000389993 SETD1BQ9UPS6 1966 aaKnown RBP16.97■□□□□ 0.31
PSME4-201ENST00000389993 PTPRTO14522 1441 aa16.97■□□□□ 0.31
PSME4-201ENST00000389993 ST5P78524 1137 aa16.97■□□□□ 0.31
PSME4-201ENST00000389993 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
PSME4-201ENST00000389993 SAP30BPQ9UHR5 308 aaKnown RBP16.96■□□□□ 0.31
PSME4-201ENST00000389993 MAGI2Q86UL8 1455 aa16.96■□□□□ 0.31
PSME4-201ENST00000389993 UIMC1Q96RL1 719 aa16.96■□□□□ 0.31
PSME4-201ENST00000389993 DCAF5Q96JK2 942 aa16.96■□□□□ 0.31
PSME4-201ENST00000389993 NOM1Q5C9Z4 860 aaKnown RBP16.96■□□□□ 0.31
PSME4-201ENST00000389993 NCOA7Q8NI08 942 aa16.96■□□□□ 0.3
PSME4-201ENST00000389993 DCTPP1Q9H773 170 aa16.96■□□□□ 0.3
PSME4-201ENST00000389993 IARSP41252 1262 aaKnown RBP16.95■□□□□ 0.3
PSME4-201ENST00000389993 MCMDC2Q4G0Z9 681 aa16.95■□□□□ 0.3
PSME4-201ENST00000389993 SUCLG2Q96I99 432 aa16.95■□□□□ 0.3
PSME4-201ENST00000389993 SMARCE1Q969G3 411 aa16.95■□□□□ 0.3
PSME4-201ENST00000389993 FAM227BQ96M60 508 aa16.95■□□□□ 0.3
PSME4-201ENST00000389993 SH2B1Q9NRF2 756 aaPredicted RBP16.95■□□□□ 0.3
PSME4-201ENST00000389993 AK2P54819 239 aa16.95■□□□□ 0.3
PSME4-201ENST00000389993 DNM1Q05193 864 aaKnown RBP16.95■□□□□ 0.3
PSME4-201ENST00000389993 WASF1Q92558 559 aa16.95■□□□□ 0.3
PSME4-201ENST00000389993 DHX37Q8IY37 1157 aaKnown RBP16.95■□□□□ 0.3
PSME4-201ENST00000389993 LINS1Q8NG48 757 aa16.95■□□□□ 0.3
PSME4-201ENST00000389993 EDC4Q6P2E9 1401 aaKnown RBP16.95■□□□□ 0.3
PSME4-201ENST00000389993 GRM1Q13255 1194 aa16.94■□□□□ 0.3
PSME4-201ENST00000389993 NLRP3Q96P20 1036 aa16.94■□□□□ 0.3
PSME4-201ENST00000389993 KAT14Q9H8E8 782 aa16.94■□□□□ 0.3
PSME4-201ENST00000389993 ZCCHC11Q5TAX3 1644 aaKnown RBP16.94■□□□□ 0.3
PSME4-201ENST00000389993 CCDC183Q5T5S1 534 aa16.94■□□□□ 0.3
PSME4-201ENST00000389993 CNNM3Q8NE01 707 aa16.94■□□□□ 0.3
PSME4-201ENST00000389993 PDCL3Q9H2J4 239 aa16.94■□□□□ 0.3
PSME4-201ENST00000389993 ZFYVE16Q7Z3T8 1539 aa16.94■□□□□ 0.3
PSME4-201ENST00000389993 KDM5AP29375 1690 aaKnown RBP16.94■□□□□ 0.3
PSME4-201ENST00000389993 STIM1Q13586 685 aa16.93■□□□□ 0.3
PSME4-201ENST00000389993 TTF1Q15361 905 aaPredicted RBP16.93■□□□□ 0.3
PSME4-201ENST00000389993 PAXIP1Q6ZW49 1069 aaPredicted RBP16.93■□□□□ 0.3
PSME4-201ENST00000389993 USP48Q86UV5 1035 aa16.93■□□□□ 0.3
PSME4-201ENST00000389993 DBNDD2Q9BQY9 259 aa16.93■□□□□ 0.3
PSME4-201ENST00000389993 PCDH11XQ9BZA7 1347 aa16.93■□□□□ 0.3
PSME4-201ENST00000389993 PCDH11YQ9BZA8 1340 aa16.93■□□□□ 0.3
PSME4-201ENST00000389993 DNAJC10Q8IXB1 793 aa16.93■□□□□ 0.3
PSME4-201ENST00000389993 ZNF496Q96IT1 587 aaPredicted RBP16.93■□□□□ 0.3
PSME4-201ENST00000389993 MBD5Q9P267 1494 aa16.93■□□□□ 0.3
PSME4-201ENST00000389993 ZFYVE9O95405 1425 aa16.93■□□□□ 0.3
PSME4-201ENST00000389993 AFMP43652 599 aa16.93■□□□□ 0.3
PSME4-201ENST00000389993 ITGA6P23229 1130 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 EIF5P55010 431 aaKnown RBP16.92■□□□□ 0.3
PSME4-201ENST00000389993 NAA16Q6N069 864 aaPredicted RBP16.92■□□□□ 0.3
PSME4-201ENST00000389993 RTCBQ9Y3I0 505 aaKnown RBP16.92■□□□□ 0.3
PSME4-201ENST00000389993 ZMYM4Q5VZL5 1548 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 FAM193AP78312 1265 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 HMGB1P09429 215 aaKnown RBP16.92■□□□□ 0.3
PSME4-201ENST00000389993 TSPY3P0CV98 308 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 TSPY8P0CW00 308 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 RUFY1Q96T51 708 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 SBNO1A3KN83 1393 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 UQCRHLA0A096LP55 91 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 UQCRHP07919 91 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 WTAPQ15007 396 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 SYCP1Q15431 976 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 CREB3L3Q68CJ9 461 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 IL17REQ8NFR9 667 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 FEZ1Q99689 392 aa16.92■□□□□ 0.3
PSME4-201ENST00000389993 CCDC194A0A1B0GVG4 234 aa16.91■□□□□ 0.3
PSME4-201ENST00000389993 ALDH1L1O75891 902 aa16.91■□□□□ 0.3
PSME4-201ENST00000389993 CHMLP26374 656 aa16.91■□□□□ 0.3
PSME4-201ENST00000389993 PLIN2Q99541 437 aa16.91■□□□□ 0.3
PSME4-201ENST00000389993 MMRN2Q9H8L6 949 aa16.91■□□□□ 0.3
PSME4-201ENST00000389993 SLC52A2Q9HAB3 445 aa16.91■□□□□ 0.3
PSME4-201ENST00000389993 TMEM2Q9UHN6 1383 aa16.91■□□□□ 0.3
PSME4-201ENST00000389993 ZSCAN23Q3MJ62 389 aa16.91■□□□□ 0.3
PSME4-201ENST00000389993 HEATR3Q7Z4Q2 680 aa16.91■□□□□ 0.3
PSME4-201ENST00000389993 EIF6P56537 245 aaKnown RBP16.91■□□□□ 0.3
PSME4-201ENST00000389993 IFIT1BQ5T764 474 aaKnown RBP16.91■□□□□ 0.3
PSME4-201ENST00000389993 MCM5P33992 734 aa16.91■□□□□ 0.3
PSME4-201ENST00000389993 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
PSME4-201ENST00000389993 SLAIN2Q9P270 581 aa16.91■□□□□ 0.3
PSME4-201ENST00000389993 SPTY2D1Q68D10 685 aaPredicted RBP16.9■□□□□ 0.3
PSME4-201ENST00000389993 ABCA8O94911 1581 aa16.9■□□□□ 0.3
PSME4-201ENST00000389993 PRC1O43663 620 aa16.9■□□□□ 0.3
PSME4-201ENST00000389993 ALG1Q9BT22 464 aa16.9■□□□□ 0.3
PSME4-201ENST00000389993 ZNHIT6Q9NWK9 470 aaKnown RBP16.9■□□□□ 0.3
PSME4-201ENST00000389993 VEZTQ9HBM0 779 aa16.9■□□□□ 0.3
PSME4-201ENST00000389993 A0A1B0GUL7 405 aa16.9■□□□□ 0.3
PSME4-201ENST00000389993 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.9■□□□□ 0.35e-7■■■■■ 71.2
PSME4-201ENST00000389993 MAGEB6P1A0A0J9YX57 407 aa16.9■□□□□ 0.3
PSME4-201ENST00000389993 GPS2Q13227 327 aa16.89■□□□□ 0.3
PSME4-201ENST00000389993 MSL1Q68DK7 614 aa16.89■□□□□ 0.29
PSME4-201ENST00000389993 DACH1Q9UI36 760 aa16.89■□□□□ 0.29
PSME4-201ENST00000389993 ESPNB1AK53 854 aa16.89■□□□□ 0.29
PSME4-201ENST00000389993 ZSCAN22P10073 491 aaPredicted RBP16.89■□□□□ 0.29
PSME4-201ENST00000389993 RNF41Q9H4P4 317 aaPredicted RBP16.89■□□□□ 0.29
PSME4-201ENST00000389993 DDX21Q9NR30 783 aaKnown RBP eCLIP16.89■□□□□ 0.29
PSME4-201ENST00000389993 CEP131Q9UPN4 1083 aa16.89■□□□□ 0.29
PSME4-201ENST00000389993 CHL1O00533 1208 aa16.89■□□□□ 0.29
PSME4-201ENST00000389993 FAM173BQ6P4H8 233 aa16.89■□□□□ 0.29
PSME4-201ENST00000389993 CRNKL1Q9BZJ0 848 aaKnown RBP16.89■□□□□ 0.29
PSME4-201ENST00000389993 ARMT1Q9H993 441 aa16.89■□□□□ 0.29
PSME4-201ENST00000389993 NCOA5Q9HCD5 579 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms