RNA–Protein interactions for RNA: ENST00000389231.9

USP5-202, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP5, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-202ENST00000389231 TOB2Q14106 344 aaPredicted RBP14.27□□□□□ -0.12
USP5-202ENST00000389231 TSGA10IPQ3SY00 556 aa14.27□□□□□ -0.12
USP5-202ENST00000389231 CDC37L1Q7L3B6 337 aa14.27□□□□□ -0.12
USP5-202ENST00000389231 FERMT3Q86UX7 667 aa14.27□□□□□ -0.12
USP5-202ENST00000389231 DBNLQ9UJU6 430 aaKnown RBP14.27□□□□□ -0.12
USP5-202ENST00000389231 PDIA4P13667 645 aaKnown RBP14.27□□□□□ -0.13
USP5-202ENST00000389231 ATP5JP18859 108 aa14.27□□□□□ -0.13
USP5-202ENST00000389231 KDM4AO75164 1064 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 SNRPA1P09661 255 aaKnown RBP14.26□□□□□ -0.13
USP5-202ENST00000389231 TFCP2Q12800 502 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 FAM173BQ6P4H8 233 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 KLHL34Q8N239 644 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 TSC1Q92574 1164 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 HMG20BQ9P0W2 317 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 LMTK3Q96Q04 1460 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 PDCP20941 246 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 TNNI3KQ59H18 835 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 TTC6Q86TZ1 520 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 IFNL2Q8IZJ0 200 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 PRIMPOLQ96LW4 560 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 FPGT-TNNI3KV9GXZ4 949 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 KRT85P78386 507 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 USPL1Q5W0Q7 1092 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 UBE3BQ7Z3V4 1068 aa14.26□□□□□ -0.13
USP5-202ENST00000389231 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.26□□□□□ -0.13
USP5-202ENST00000389231 HMGN5P82970 282 aaKnown RBP14.25□□□□□ -0.13
USP5-202ENST00000389231 C19orf44Q9H6X5 657 aa14.25□□□□□ -0.13
USP5-202ENST00000389231 NDUFB9Q9Y6M9 179 aa14.25□□□□□ -0.13
USP5-202ENST00000389231 RABL6Q3YEC7 729 aaPredicted RBP14.25□□□□□ -0.13
USP5-202ENST00000389231 TTC5Q8N0Z6 440 aa14.25□□□□□ -0.13
USP5-202ENST00000389231 JCADQ9P266 1359 aa14.24□□□□□ -0.13
USP5-202ENST00000389231 C1orf167Q5SNV9 1468 aa14.24□□□□□ -0.13
USP5-202ENST00000389231 ATP5J2-PTCD1G3V325 749 aa14.24□□□□□ -0.13
USP5-202ENST00000389231 PTCD1O75127 700 aaKnown RBP14.24□□□□□ -0.13
USP5-202ENST00000389231 CHGBP05060 677 aa14.24□□□□□ -0.13
USP5-202ENST00000389231 STK3Q13188 491 aa14.24□□□□□ -0.13
USP5-202ENST00000389231 COL15A1P39059 1388 aa14.24□□□□□ -0.13
USP5-202ENST00000389231 CAMTA1Q9Y6Y1 1673 aa14.24□□□□□ -0.13
USP5-202ENST00000389231 A0A087WZG4 1122 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 CYP27B1O15528 508 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 CSB-PGBD3P0DP91 1061 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 DDX17Q92841 729 aaKnown RBP14.23□□□□□ -0.13
USP5-202ENST00000389231 DCAF5Q96JK2 942 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 DBNDD2Q9BQY9 259 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 CHMP3Q9Y3E7 222 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 ADAMTS7Q9UKP4 1686 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 SIPA1L3O60292 1781 aaPredicted RBP14.23□□□□□ -0.13
USP5-202ENST00000389231 FMNL2Q96PY5 1086 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 CCDC94Q9BW85 323 aaPredicted RBP14.23□□□□□ -0.13
USP5-202ENST00000389231 ELP1O95163 1332 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 AP5Z1O43299 807 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 LIG1P18858 919 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 KRT32Q14532 448 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 SMAP1Q8IYB5 467 aaPredicted RBP14.23□□□□□ -0.13
USP5-202ENST00000389231 TFIP11Q9UBB9 837 aaKnown RBP14.23□□□□□ -0.13
USP5-202ENST00000389231 PRDM4Q9UKN5 801 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 MRC1P22897 1456 aa14.23□□□□□ -0.13
USP5-202ENST00000389231 CCDC129Q6ZRS4 1044 aa14.22□□□□□ -0.13
USP5-202ENST00000389231 NEK1Q96PY6 1258 aa14.22□□□□□ -0.13
USP5-202ENST00000389231 SEC62Q99442 399 aaKnown RBP14.22□□□□□ -0.13
USP5-202ENST00000389231 DNAJC2Q99543 621 aaKnown RBP14.22□□□□□ -0.13
USP5-202ENST00000389231 PRDM10Q9NQV6 1147 aa14.22□□□□□ -0.13
USP5-202ENST00000389231 CCDC192P0DO97 292 aa14.22□□□□□ -0.13
USP5-202ENST00000389231 MEGF6O75095 1541 aa14.22□□□□□ -0.13
USP5-202ENST00000389231 MST1RQ04912 1400 aa14.22□□□□□ -0.13
USP5-202ENST00000389231 FAM177BA6PVY3 158 aa14.21□□□□□ -0.13
USP5-202ENST00000389231 CASP7P55210 303 aa14.21□□□□□ -0.13
USP5-202ENST00000389231 CABLES1Q8TDN4 633 aa14.21□□□□□ -0.13
USP5-202ENST00000389231 HAUS7Q99871 368 aa14.21□□□□□ -0.13
USP5-202ENST00000389231 SCAND2PQ9GZW5 306 aaPredicted RBP14.21□□□□□ -0.13
USP5-202ENST00000389231 JAK2O60674 1132 aa14.21□□□□□ -0.14
USP5-202ENST00000389231 CHRNA2Q15822 529 aa14.21□□□□□ -0.14
USP5-202ENST00000389231 CAMK4Q16566 473 aa14.21□□□□□ -0.14
USP5-202ENST00000389231 MCMDC2Q4G0Z9 681 aa14.21□□□□□ -0.14
USP5-202ENST00000389231 LMBR1LQ6UX01 489 aa14.21□□□□□ -0.14
USP5-202ENST00000389231 ZNF710Q8N1W2 664 aa14.21□□□□□ -0.14
USP5-202ENST00000389231 SPC24Q8NBT2 197 aa14.21□□□□□ -0.14
USP5-202ENST00000389231 SPTLC3Q9NUV7 552 aa14.21□□□□□ -0.14
USP5-202ENST00000389231 KIF3AQ9Y496 699 aa14.21□□□□□ -0.14
USP5-202ENST00000389231 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.14
USP5-202ENST00000389231 TRPM3Q9HCF6 1732 aaPredicted RBP14.2□□□□□ -0.14
USP5-202ENST00000389231 CYP21A2P08686 494 aa14.2□□□□□ -0.14
USP5-202ENST00000389231 CABP4P57796 275 aa14.2□□□□□ -0.14
USP5-202ENST00000389231 DDX46Q7L014 1031 aaKnown RBP14.2□□□□□ -0.14
USP5-202ENST00000389231 PLBD2Q8NHP8 589 aa14.2□□□□□ -0.14
USP5-202ENST00000389231 GTF3C6Q969F1 213 aa14.2□□□□□ -0.14
USP5-202ENST00000389231 SPATA32Q96LK8 384 aa14.2□□□□□ -0.14
USP5-202ENST00000389231 NUP62CLQ9H1M0 184 aa14.2□□□□□ -0.14
USP5-202ENST00000389231 ZNF609O15014 1411 aa14.2□□□□□ -0.14
USP5-202ENST00000389231 MAP3K11Q16584 847 aa14.2□□□□□ -0.14
USP5-202ENST00000389231 Q6ZUG5 572 aa14.2□□□□□ -0.14
USP5-202ENST00000389231 LEO1Q8WVC0 666 aaPredicted RBP14.2□□□□□ -0.14
USP5-202ENST00000389231 DACT1Q9NYF0 836 aa14.2□□□□□ -0.14
USP5-202ENST00000389231 GTF2F1P35269 517 aaKnown RBP eCLIP14.19□□□□□ -0.14
USP5-202ENST00000389231 CCDC9Q9Y3X0 531 aaKnown RBP14.19□□□□□ -0.14
USP5-202ENST00000389231 ZNF142P52746 1687 aaPredicted RBP14.19□□□□□ -0.14
USP5-202ENST00000389231 GOLGA6L4A6NEF3 574 aa14.19□□□□□ -0.14
USP5-202ENST00000389231 KBTBD3Q8NAB2 608 aa14.18□□□□□ -0.14
USP5-202ENST00000389231 FOXO4P98177 505 aa14.18□□□□□ -0.14
USP5-202ENST00000389231 PYCARDQ9ULZ3 195 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms