RNA–Protein interactions for RNA: ENST00000384619.1

RNVU1-17-201, Transcript of RNA, variant U1 small nuclear 17, humanhuman

BASIC

Gene RNVU1-17, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-17-201ENST00000384619 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
RNVU1-17-201ENST00000384619 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
RNVU1-17-201ENST00000384619 RTL9Q8NET4 1388 aa12.36□□□□□ -0.43
RNVU1-17-201ENST00000384619 BBOX1O75936 387 aa12.36□□□□□ -0.43
RNVU1-17-201ENST00000384619 HOXA10P31260 410 aaPredicted RBP12.36□□□□□ -0.43
RNVU1-17-201ENST00000384619 HDAC1Q13547 482 aaPredicted RBP12.36□□□□□ -0.43
RNVU1-17-201ENST00000384619 TAF7LQ5H9L4 462 aa12.36□□□□□ -0.43
RNVU1-17-201ENST00000384619 CCDC24Q8N4L8 307 aa12.36□□□□□ -0.43
RNVU1-17-201ENST00000384619 CRAMP1Q96RY5 1269 aa12.36□□□□□ -0.43
RNVU1-17-201ENST00000384619 PPP4R2Q9NY27 417 aa12.36□□□□□ -0.43
RNVU1-17-201ENST00000384619 PCDHB15Q9Y5E8 787 aa12.36□□□□□ -0.43
RNVU1-17-201ENST00000384619 SCN7AQ01118 1682 aa12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 SRGNP10124 158 aa12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 ITGA6P23229 1130 aa12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 RPS8P62241 208 aaKnown RBP12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 POLA2Q14181 598 aa12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 STYK1Q6J9G0 422 aa12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 TMC4Q7Z404 712 aa12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 C2CD5Q86YS7 1000 aa12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 CNKSR1Q969H4 720 aa12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 MASTLQ96GX5 879 aa12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 TMX4Q9H1E5 349 aaPredicted RBP12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 GREM2Q9H772 168 aa12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 PPP1R1BQ9UD71 204 aaPredicted RBP12.35□□□□□ -0.43
RNVU1-17-201ENST00000384619 QSER1Q2KHR3 1735 aa12.34□□□□□ -0.43
RNVU1-17-201ENST00000384619 ABCC12Q96J65 1359 aa12.34□□□□□ -0.43
RNVU1-17-201ENST00000384619 IGHMBP2P38935 993 aaKnown RBP12.34□□□□□ -0.43
RNVU1-17-201ENST00000384619 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
RNVU1-17-201ENST00000384619 CCDC136Q96JN2 1154 aa12.34□□□□□ -0.43
RNVU1-17-201ENST00000384619 MPHOSPH8Q99549 860 aa12.34□□□□□ -0.43
RNVU1-17-201ENST00000384619 COPRSQ9NQ92 184 aa12.34□□□□□ -0.43
RNVU1-17-201ENST00000384619 ARFGEF2Q9Y6D5 1785 aa12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 PNMA6EA0A0J9YXQ4 647 aa12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 RAB11FIP3O75154 756 aa12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 SURF6O75683 361 aaKnown RBP12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 G3BP1Q13283 466 aaKnown RBP eCLIP12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 FAM161AQ3B820 660 aa12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 LDHAL6AQ6ZMR3 332 aa12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 SIRT2Q8IXJ6 389 aa12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 GCC1Q96CN9 775 aa12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 CCDC85AQ96PX6 553 aaPredicted RBP12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 BSDC1Q9NW68 430 aaPredicted RBP12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 NOP58Q9Y2X3 529 aaKnown RBP12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 BCORQ6W2J9 1755 aa12.33□□□□□ -0.44
RNVU1-17-201ENST00000384619 C4AP0C0L4 1744 aa12.32□□□□□ -0.44
RNVU1-17-201ENST00000384619 CIAO1O76071 339 aa12.32□□□□□ -0.44
RNVU1-17-201ENST00000384619 PTPN12Q05209 780 aaKnown RBP12.32□□□□□ -0.44
RNVU1-17-201ENST00000384619 GRAPQ13588 217 aa12.32□□□□□ -0.44
RNVU1-17-201ENST00000384619 GRIPAP1Q4V328 841 aa12.32□□□□□ -0.44
RNVU1-17-201ENST00000384619 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
RNVU1-17-201ENST00000384619 ERC1Q8IUD2 1116 aa12.32□□□□□ -0.44
RNVU1-17-201ENST00000384619 GRAPLQ8TC17 118 aaPredicted RBP12.32□□□□□ -0.44
RNVU1-17-201ENST00000384619 ZNF622Q969S3 477 aaKnown RBP eCLIP12.32□□□□□ -0.44
RNVU1-17-201ENST00000384619 DCTPP1Q9H773 170 aa12.32□□□□□ -0.44
RNVU1-17-201ENST00000384619 PIM2Q9P1W9 311 aa12.32□□□□□ -0.44
RNVU1-17-201ENST00000384619 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
RNVU1-17-201ENST00000384619 C10orf71Q711Q0 1435 aa12.31□□□□□ -0.44
RNVU1-17-201ENST00000384619 EYA2O00167 538 aa12.31□□□□□ -0.44
RNVU1-17-201ENST00000384619 IL15P40933 162 aaPredicted RBP12.31□□□□□ -0.44
RNVU1-17-201ENST00000384619 RFX5P48382 616 aaPredicted RBP12.31□□□□□ -0.44
RNVU1-17-201ENST00000384619 OS9Q13438 667 aaPredicted RBP12.31□□□□□ -0.44
RNVU1-17-201ENST00000384619 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
RNVU1-17-201ENST00000384619 TTLL6Q8N841 843 aa12.31□□□□□ -0.44
RNVU1-17-201ENST00000384619 SEC31BQ9NQW1 1179 aa12.31□□□□□ -0.44
RNVU1-17-201ENST00000384619 CNNM1Q9NRU3 951 aa12.31□□□□□ -0.44
RNVU1-17-201ENST00000384619 A0A0G2JLW4 131 aa12.3□□□□□ -0.44
RNVU1-17-201ENST00000384619 DPEP1P16444 411 aa12.3□□□□□ -0.44
RNVU1-17-201ENST00000384619 SP8Q8IXZ3 490 aa12.3□□□□□ -0.44
RNVU1-17-201ENST00000384619 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
RNVU1-17-201ENST00000384619 ANKRD2Q9GZV1 360 aa12.3□□□□□ -0.44
RNVU1-17-201ENST00000384619 MROH5Q6ZUA9 1318 aa12.3□□□□□ -0.44
RNVU1-17-201ENST00000384619 CHRNA5P30532 468 aa12.29□□□□□ -0.44
RNVU1-17-201ENST00000384619 SOGA3Q5TF21 947 aa12.29□□□□□ -0.44
RNVU1-17-201ENST00000384619 CENPQQ7L2Z9 268 aaPredicted RBP12.29□□□□□ -0.44
RNVU1-17-201ENST00000384619 CELF1Q92879 486 aaKnown RBP12.29□□□□□ -0.44
RNVU1-17-201ENST00000384619 KIF1BPQ96EK5 621 aa12.29□□□□□ -0.44
RNVU1-17-201ENST00000384619 CEP126Q9P2H0 1117 aa12.29□□□□□ -0.44
RNVU1-17-201ENST00000384619 RIPOR2Q9Y4F9 1068 aa12.29□□□□□ -0.44
RNVU1-17-201ENST00000384619 GTF3C3Q9Y5Q9 886 aa12.29□□□□□ -0.44
RNVU1-17-201ENST00000384619 NUP98P52948 1817 aa12.29□□□□□ -0.44
RNVU1-17-201ENST00000384619 CASZ1Q86V15 1759 aa12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 PPEF1O14829 653 aaPredicted RBP12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 IGHDP01880 384 aa12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 KCNA3P22001 575 aa12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 DALRD3Q5D0E6 543 aaKnown RBP12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 SMC5Q8IY18 1101 aa12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 ZNF594Q96JF6 807 aaPredicted RBP12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 SYT17Q9BSW7 474 aa12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 FHDC1Q9C0D6 1143 aaPredicted RBP12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 SIL1Q9H173 461 aa12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 PA2G4Q9UQ80 394 aaKnown RBP12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 AKAP2Q9Y2D5 859 aa12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 ATP6V0A2Q9Y487 856 aa12.28□□□□□ -0.44
RNVU1-17-201ENST00000384619 PRPF40BQ6NWY9 871 aaKnown RBP12.27□□□□□ -0.45
RNVU1-17-201ENST00000384619 KLHDC4Q8TBB5 520 aa12.27□□□□□ -0.45
RNVU1-17-201ENST00000384619 LRRCC1Q9C099 1032 aa12.27□□□□□ -0.45
RNVU1-17-201ENST00000384619 MINPP1Q9UNW1 487 aa12.27□□□□□ -0.45
RNVU1-17-201ENST00000384619 COL24A1Q17RW2 1714 aa12.27□□□□□ -0.45
RNVU1-17-201ENST00000384619 TUBGCP6Q96RT7 1819 aa12.26□□□□□ -0.45
RNVU1-17-201ENST00000384619 LRRC24Q50LG9 513 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms