RNA–Protein interactions for RNA: ENST00000381808.7

SDCBP2-203, Transcript of syndecan binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SDCBP2, Length 1,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-203ENST00000381808 PDE8AO60658 829 aa23.53■■□□□ 1.36
SDCBP2-203ENST00000381808 PRELPP51888 382 aa23.53■■□□□ 1.36
SDCBP2-203ENST00000381808 C9orf131Q5VYM1 1079 aa23.53■■□□□ 1.36
SDCBP2-203ENST00000381808 HSP90B1P14625 803 aaKnown RBP23.52■■□□□ 1.36
SDCBP2-203ENST00000381808 RNF181Q9P0P0 153 aa23.52■■□□□ 1.36
SDCBP2-203ENST00000381808 SNED1Q8TER0 1413 aa23.51■■□□□ 1.35
SDCBP2-203ENST00000381808 GRAPQ13588 217 aa23.51■■□□□ 1.35
SDCBP2-203ENST00000381808 GRAPLQ8TC17 118 aaPredicted RBP23.51■■□□□ 1.35
SDCBP2-203ENST00000381808 CCDC85AQ96PX6 553 aaPredicted RBP23.51■■□□□ 1.35
SDCBP2-203ENST00000381808 SRCIN1Q9C0H9 1055 aa23.51■■□□□ 1.35
SDCBP2-203ENST00000381808 TAOK3Q9H2K8 898 aa23.51■■□□□ 1.35
SDCBP2-203ENST00000381808 NOB1Q9ULX3 412 aaKnown RBP23.51■■□□□ 1.35
SDCBP2-203ENST00000381808 CASP7P55210 303 aa23.5■■□□□ 1.35
SDCBP2-203ENST00000381808 ALDH1L1O75891 902 aa23.49■■□□□ 1.35
SDCBP2-203ENST00000381808 LMNB1P20700 586 aa23.49■■□□□ 1.35
SDCBP2-203ENST00000381808 CTSWP56202 376 aa23.49■■□□□ 1.35
SDCBP2-203ENST00000381808 CELF1Q92879 486 aaKnown RBP23.49■■□□□ 1.35
SDCBP2-203ENST00000381808 LTBP3Q9NS15 1303 aa23.49■■□□□ 1.35
SDCBP2-203ENST00000381808 BRPF1P55201 1214 aaPredicted RBP23.48■■□□□ 1.35
SDCBP2-203ENST00000381808 CCDC152Q4G0S7 254 aa23.48■■□□□ 1.35
SDCBP2-203ENST00000381808 ZNF784Q8NCA9 323 aaPredicted RBP23.48■■□□□ 1.35
SDCBP2-203ENST00000381808 SEC31BQ9NQW1 1179 aa23.48■■□□□ 1.35
SDCBP2-203ENST00000381808 GRM8O00222 908 aa23.47■■□□□ 1.35
SDCBP2-203ENST00000381808 BCAR3O75815 825 aa23.47■■□□□ 1.35
SDCBP2-203ENST00000381808 BBOX1O75936 387 aa23.47■■□□□ 1.35
SDCBP2-203ENST00000381808 FKBP4Q02790 459 aaKnown RBP eCLIP23.47■■□□□ 1.35
SDCBP2-203ENST00000381808 RTKN2Q8IZC4 609 aa23.47■■□□□ 1.35
SDCBP2-203ENST00000381808 ATP6V0A2Q9Y487 856 aa23.47■■□□□ 1.35
SDCBP2-203ENST00000381808 CC2D2BQ6DHV5 1058 aa23.46■■□□□ 1.35
SDCBP2-203ENST00000381808 TTLL11Q8NHH1 800 aa23.46■■□□□ 1.35
SDCBP2-203ENST00000381808 KIF16BQ96L93 1317 aa23.46■■□□□ 1.35
SDCBP2-203ENST00000381808 C9orf78Q9NZ63 289 aaPredicted RBP23.46■■□□□ 1.35
SDCBP2-203ENST00000381808 LTBP1Q14766 1721 aa23.45■■□□□ 1.34
SDCBP2-203ENST00000381808 PLA2G12BQ9BX93 195 aa23.45■■□□□ 1.34
SDCBP2-203ENST00000381808 SP8Q8IXZ3 490 aa23.44■■□□□ 1.34
SDCBP2-203ENST00000381808 ZNF526Q8TF50 670 aaPredicted RBP23.44■■□□□ 1.34
SDCBP2-203ENST00000381808 API5Q9BZZ5 524 aaKnown RBP23.44■■□□□ 1.34
SDCBP2-203ENST00000381808 TMX4Q9H1E5 349 aaPredicted RBP23.44■■□□□ 1.34
SDCBP2-203ENST00000381808 GREM2Q9H772 168 aa23.44■■□□□ 1.34
SDCBP2-203ENST00000381808 ZNF277Q9NRM2 450 aaPredicted RBP23.44■■□□□ 1.34
SDCBP2-203ENST00000381808 DUOX1Q9NRD9 1551 aa23.43■■□□□ 1.34
SDCBP2-203ENST00000381808 RPS8P62241 208 aaKnown RBP23.42■■□□□ 1.34
SDCBP2-203ENST00000381808 TMC4Q7Z404 712 aa23.42■■□□□ 1.34
SDCBP2-203ENST00000381808 FRAT1Q92837 279 aaPredicted RBP23.42■■□□□ 1.34
SDCBP2-203ENST00000381808 PSMD1Q99460 953 aa23.42■■□□□ 1.34
SDCBP2-203ENST00000381808 RTL9Q8NET4 1388 aa23.41■■□□□ 1.34
SDCBP2-203ENST00000381808 NBPF7P0C2Y1 421 aaPredicted RBP23.41■■□□□ 1.34
SDCBP2-203ENST00000381808 FOXO4P98177 505 aa23.41■■□□□ 1.34
SDCBP2-203ENST00000381808 FAM161AQ3B820 660 aa23.41■■□□□ 1.34
SDCBP2-203ENST00000381808 GRIPAP1Q4V328 841 aa23.41■■□□□ 1.34
SDCBP2-203ENST00000381808 A0A1B0GUL6 1792 aa23.41■■□□□ 1.34
SDCBP2-203ENST00000381808 EPHA10Q5JZY3 1008 aa23.4■■□□□ 1.34
SDCBP2-203ENST00000381808 TNNQ9UQP3 1299 aa23.4■■□□□ 1.34
SDCBP2-203ENST00000381808 COL4A5P29400 1685 aa23.4■■□□□ 1.34
SDCBP2-203ENST00000381808 UTYO14607 1347 aa23.39■■□□□ 1.34
SDCBP2-203ENST00000381808 CSF1RP07333 972 aa23.39■■□□□ 1.33
SDCBP2-203ENST00000381808 IARSP41252 1262 aaKnown RBP23.39■■□□□ 1.33
SDCBP2-203ENST00000381808 CCT4P50991 539 aaKnown RBP23.39■■□□□ 1.33
SDCBP2-203ENST00000381808 DPP8Q6V1X1 898 aaPredicted RBP23.39■■□□□ 1.33
SDCBP2-203ENST00000381808 ANKRD18AQ8IVF6 992 aa23.39■■□□□ 1.33
SDCBP2-203ENST00000381808 MPNDQ8N594 471 aa23.39■■□□□ 1.33
SDCBP2-203ENST00000381808 ARHGAP45Q92619 1136 aa23.39■■□□□ 1.33
SDCBP2-203ENST00000381808 SUCLG2Q96I99 432 aa23.39■■□□□ 1.33
SDCBP2-203ENST00000381808 ZC3H4Q9UPT8 1303 aaKnown RBP23.38■■□□□ 1.33
SDCBP2-203ENST00000381808 CDC5LQ99459 802 aaKnown RBP23.38■■□□□ 1.33
SDCBP2-203ENST00000381808 CHMP3Q9Y3E7 222 aa23.38■■□□□ 1.33
SDCBP2-203ENST00000381808 IPO8O15397 1037 aaKnown RBP23.37■■□□□ 1.33
SDCBP2-203ENST00000381808 TRIM27P14373 513 aa23.37■■□□□ 1.33
SDCBP2-203ENST00000381808 ITGA6P23229 1130 aa23.37■■□□□ 1.33
SDCBP2-203ENST00000381808 LMBR1LQ6UX01 489 aa23.37■■□□□ 1.33
SDCBP2-203ENST00000381808 USP44Q9H0E7 712 aa23.37■■□□□ 1.33
SDCBP2-203ENST00000381808 GPSM2P81274 684 aa23.36■■□□□ 1.33
SDCBP2-203ENST00000381808 ATF7IPQ6VMQ6 1270 aa23.36■■□□□ 1.33
SDCBP2-203ENST00000381808 KAZALD1Q96I82 304 aa23.36■■□□□ 1.33
SDCBP2-203ENST00000381808 GPBP1L1Q9HC44 474 aaPredicted RBP23.36■■□□□ 1.33
SDCBP2-203ENST00000381808 ZKSCAN2Q63HK3 967 aa23.35■■□□□ 1.33
SDCBP2-203ENST00000381808 RTFDC1Q9BY42 306 aaPredicted RBP23.35■■□□□ 1.33
SDCBP2-203ENST00000381808 NSFL1CQ9UNZ2 370 aaKnown RBP23.35■■□□□ 1.33
SDCBP2-203ENST00000381808 SUPT20HQ8NEM7 779 aa23.34■■□□□ 1.33
SDCBP2-203ENST00000381808 CLUAP1Q96AJ1 413 aa23.34■■□□□ 1.33
SDCBP2-203ENST00000381808 ANKRD18BA2A2Z9 1011 aa23.33■■□□□ 1.33
SDCBP2-203ENST00000381808 PPIP5K2O43314 1243 aa23.33■■□□□ 1.33
SDCBP2-203ENST00000381808 IGHMBP2P38935 993 aaKnown RBP23.33■■□□□ 1.33
SDCBP2-203ENST00000381808 AOC3Q16853 763 aa23.33■■□□□ 1.33
SDCBP2-203ENST00000381808 LARGE2Q8N3Y3 721 aa23.33■■□□□ 1.33
SDCBP2-203ENST00000381808 BICC1Q9H694 974 aaKnown RBP23.33■■□□□ 1.33
SDCBP2-203ENST00000381808 IFIT5Q13325 482 aaKnown RBP23.32■■□□□ 1.32
SDCBP2-203ENST00000381808 INTS3Q68E01 1043 aaKnown RBP23.32■■□□□ 1.32
SDCBP2-203ENST00000381808 KDM2BQ8NHM5 1336 aa23.32■■□□□ 1.32
SDCBP2-203ENST00000381808 WDR90Q96KV7 1748 aa23.31■■□□□ 1.32
SDCBP2-203ENST00000381808 GLTPD2A6NH11 291 aa23.31■■□□□ 1.32
SDCBP2-203ENST00000381808 ANKRD44Q8N8A2 993 aa23.31■■□□□ 1.32
SDCBP2-203ENST00000381808 GPR101Q96P66 508 aaPredicted RBP23.31■■□□□ 1.32
SDCBP2-203ENST00000381808 BSDC1Q9NW68 430 aaPredicted RBP23.31■■□□□ 1.32
SDCBP2-203ENST00000381808 ANKIB1Q9P2G1 1089 aa23.31■■□□□ 1.32
SDCBP2-203ENST00000381808 POLLQ9UGP5 575 aa23.31■■□□□ 1.32
SDCBP2-203ENST00000381808 ZNF541Q9H0D2 1346 aa23.31■■□□□ 1.32
SDCBP2-203ENST00000381808 C6orf229H3BNL8 230 aa23.3■■□□□ 1.32
SDCBP2-203ENST00000381808 CCDC57Q2TAC2 916 aa23.3■■□□□ 1.32
SDCBP2-203ENST00000381808 TBC1D16Q8TBP0 767 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms