RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 DNAAF4Q8WXU2 420 aa12.69□□□□□ -0.38
ITSN1-201ENST00000379960 CDK12Q9NYV4 1490 aaPredicted RBP12.69□□□□□ -0.38
ITSN1-201ENST00000379960 CCDC196A0A1B0GTZ2 297 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 FIBPO43427 364 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 FCHSD2O94868 740 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 MNAT1P51948 309 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 GORABQ5T7V8 394 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 USHBP1Q8N6Y0 703 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 EXOC4Q96A65 974 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 SYTL4Q96C24 671 aaPredicted RBP12.68□□□□□ -0.38
ITSN1-201ENST00000379960 UBXN6Q9BZV1 441 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 C1orf115Q9H7X2 142 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 CLIP2Q9UDT6 1046 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 NOB1Q9ULX3 412 aaKnown RBP12.68□□□□□ -0.38
ITSN1-201ENST00000379960 UBE2HP62256 183 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 FILIP1Q7Z7B0 1213 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 FAM200AQ8TCP9 573 aa12.68□□□□□ -0.38
ITSN1-201ENST00000379960 ZSCAN16Q9H4T2 348 aaPredicted RBP12.68□□□□□ -0.38
ITSN1-201ENST00000379960 ZNF75DP51815 510 aa12.67□□□□□ -0.38
ITSN1-201ENST00000379960 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
ITSN1-201ENST00000379960 NWD1Q149M9 1564 aa12.67□□□□□ -0.38
ITSN1-201ENST00000379960 CORO7P57737 925 aa12.67□□□□□ -0.38
ITSN1-201ENST00000379960 SSH1Q8WYL5 1049 aa12.67□□□□□ -0.38
ITSN1-201ENST00000379960 SRCIN1Q9C0H9 1055 aa12.67□□□□□ -0.38
ITSN1-201ENST00000379960 TCHHQ07283 1943 aa12.67□□□□□ -0.38
ITSN1-201ENST00000379960 RBM28Q9NW13 759 aaKnown RBP12.67□□□□□ -0.38
ITSN1-201ENST00000379960 KIF2AO00139 706 aaPredicted RBP12.66□□□□□ -0.38
ITSN1-201ENST00000379960 TTC19Q6DKK2 380 aaPredicted RBP12.66□□□□□ -0.38
ITSN1-201ENST00000379960 CABLES1Q8TDN4 633 aa12.66□□□□□ -0.38
ITSN1-201ENST00000379960 TBC1D8O95759 1140 aa12.66□□□□□ -0.38
ITSN1-201ENST00000379960 SKILP12757 684 aa12.66□□□□□ -0.38
ITSN1-201ENST00000379960 INTS3Q68E01 1043 aaKnown RBP12.66□□□□□ -0.38
ITSN1-201ENST00000379960 WDR63Q8IWG1 891 aa12.66□□□□□ -0.38
ITSN1-201ENST00000379960 MICALL1Q8N3F8 863 aa12.66□□□□□ -0.38
ITSN1-201ENST00000379960 UBXN4Q92575 508 aa12.66□□□□□ -0.38
ITSN1-201ENST00000379960 C1orf167Q5SNV9 1468 aa12.66□□□□□ -0.38
ITSN1-201ENST00000379960 USP31Q70CQ4 1352 aa12.66□□□□□ -0.38
ITSN1-201ENST00000379960 PSD3Q9NYI0 1048 aa12.65□□□□□ -0.38
ITSN1-201ENST00000379960 WDR33Q9C0J8 1336 aaKnown RBP12.65□□□□□ -0.38
ITSN1-201ENST00000379960 LRRC8AQ8IWT6 810 aa12.65□□□□□ -0.38
ITSN1-201ENST00000379960 TMEM87AQ8NBN3 555 aa12.65□□□□□ -0.38
ITSN1-201ENST00000379960 GCC1Q96CN9 775 aa12.65□□□□□ -0.38
ITSN1-201ENST00000379960 SLC24A3Q9HC58 644 aa12.65□□□□□ -0.38
ITSN1-201ENST00000379960 ORC3Q9UBD5 711 aaPredicted RBP12.65□□□□□ -0.38
ITSN1-201ENST00000379960 ELL2O00472 640 aaPredicted RBP12.64□□□□□ -0.39
ITSN1-201ENST00000379960 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
ITSN1-201ENST00000379960 PLA2G4DQ86XP0 818 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 JMYQ8N9B5 988 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 MARF1Q9Y4F3 1742 aaKnown RBP12.64□□□□□ -0.39
ITSN1-201ENST00000379960 H0YHG0 523 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 CALRP27797 417 aaKnown RBP12.64□□□□□ -0.39
ITSN1-201ENST00000379960 HOXC9P31274 260 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 SARNPP82979 210 aaKnown RBP12.64□□□□□ -0.39
ITSN1-201ENST00000379960 TRDNQ13061 729 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 EYA1Q99502 592 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 PLEKHA4Q9H4M7 779 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 SMC2O95347 1197 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 EXOSC9Q06265 439 aaKnown RBP12.64□□□□□ -0.39
ITSN1-201ENST00000379960 ZRSR1Q15695 479 aaKnown RBP12.64□□□□□ -0.39
ITSN1-201ENST00000379960 PLEKHO1Q53GL0 409 aaPredicted RBP12.64□□□□□ -0.39
ITSN1-201ENST00000379960 PHF23Q9BUL5 403 aaPredicted RBP12.64□□□□□ -0.39
ITSN1-201ENST00000379960 EPC1Q9H2F5 836 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 L2HGDHQ9H9P8 463 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 CBX8Q9HC52 389 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 CHMP3Q9Y3E7 222 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.64□□□□□ -0.39
ITSN1-201ENST00000379960 FLT4P35916 1363 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 DLG5Q8TDM6 1919 aa12.64□□□□□ -0.39
ITSN1-201ENST00000379960 TPM1P09493 284 aa12.63□□□□□ -0.39
ITSN1-201ENST00000379960 NFE2L2Q16236 605 aa12.63□□□□□ -0.39
ITSN1-201ENST00000379960 CAMK4Q16566 473 aa12.63□□□□□ -0.39
ITSN1-201ENST00000379960 NAIF1Q69YI7 327 aaPredicted RBP12.63□□□□□ -0.39
ITSN1-201ENST00000379960 TADA2BQ86TJ2 420 aa12.63□□□□□ -0.39
ITSN1-201ENST00000379960 CCAR2Q8N163 923 aaKnown RBP12.63□□□□□ -0.39
ITSN1-201ENST00000379960 MRVI1Q9Y6F6 885 aa12.63□□□□□ -0.39
ITSN1-201ENST00000379960 MSH6P52701 1360 aa12.63□□□□□ -0.39
ITSN1-201ENST00000379960 SBNO1A3KN83 1393 aa12.63□□□□□ -0.39
ITSN1-201ENST00000379960 H3BQF6 201 aa12.63□□□□□ -0.39
ITSN1-201ENST00000379960 MPHOSPH10O00566 681 aaKnown RBP12.63□□□□□ -0.39
ITSN1-201ENST00000379960 CPP00450 1065 aa12.63□□□□□ -0.39
ITSN1-201ENST00000379960 SSR1P43307 286 aaKnown RBP12.63□□□□□ -0.39
ITSN1-201ENST00000379960 CUL4AQ13619 759 aa12.63□□□□□ -0.39
ITSN1-201ENST00000379960 ELP1O95163 1332 aa12.63□□□□□ -0.39
ITSN1-201ENST00000379960 TYRO3Q06418 890 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 MCM10Q7L590 875 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.62□□□□□ -0.39
ITSN1-201ENST00000379960 LRRC59Q96AG4 307 aaKnown RBP12.62□□□□□ -0.39
ITSN1-201ENST00000379960 BORCS6Q96GS4 357 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 SRRTQ9BXP5 876 aaKnown RBP12.62□□□□□ -0.39
ITSN1-201ENST00000379960 MST1RQ04912 1400 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 LTN1O94822 1766 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 NEBLO76041 1014 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 SNW1Q13573 536 aaKnown RBP12.62□□□□□ -0.39
ITSN1-201ENST00000379960 NBPF9Q3BBW0 867 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 ANO6Q4KMQ2 910 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 NBPF10Q6P3W6 841 aaKnown RBP12.62□□□□□ -0.39
ITSN1-201ENST00000379960 CADPS2Q86UW7 1296 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 EFCAB13Q8IY85 973 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 ZNF428Q96B54 188 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms