RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 LINC00116Q8NCU8 138 aa23.53■■□□□ 1.36
SSU72-204ENST00000378726 UBE2Q2Q8WVN8 375 aa23.53■■□□□ 1.36
SSU72-204ENST00000378726 PUS3Q9BZE2 481 aaKnown RBP23.53■■□□□ 1.36
SSU72-204ENST00000378726 IFIT5Q13325 482 aaKnown RBP23.53■■□□□ 1.36
SSU72-204ENST00000378726 IL25Q9H293 177 aa23.53■■□□□ 1.36
SSU72-204ENST00000378726 RRAGDQ9NQL2 400 aaPredicted RBP23.53■■□□□ 1.36
SSU72-204ENST00000378726 TTLL11Q8NHH1 800 aa23.52■■□□□ 1.36
SSU72-204ENST00000378726 DBNDD2Q9BQY9 259 aa23.52■■□□□ 1.36
SSU72-204ENST00000378726 DDIT3P35638 169 aa23.52■■□□□ 1.36
SSU72-204ENST00000378726 RABEP1Q15276 862 aa23.52■■□□□ 1.36
SSU72-204ENST00000378726 CWC27Q6UX04 472 aaKnown RBP23.52■■□□□ 1.36
SSU72-204ENST00000378726 NUP98P52948 1817 aa23.52■■□□□ 1.36
SSU72-204ENST00000378726 THSD7AQ9UPZ6 1657 aa23.52■■□□□ 1.35
SSU72-204ENST00000378726 SGSM2O43147 1006 aa23.51■■□□□ 1.35
SSU72-204ENST00000378726 ATP5JP18859 108 aa23.51■■□□□ 1.35
SSU72-204ENST00000378726 SUSD4Q5VX71 490 aa23.51■■□□□ 1.35
SSU72-204ENST00000378726 SEPT12Q8IYM1 358 aa23.51■■□□□ 1.35
SSU72-204ENST00000378726 NEUROD6Q96NK8 337 aa23.51■■□□□ 1.35
SSU72-204ENST00000378726 GPR108Q9NPR9 543 aa23.51■■□□□ 1.35
SSU72-204ENST00000378726 MYH14Q7Z406 1995 aaKnown RBP23.51■■□□□ 1.35
SSU72-204ENST00000378726 TAF7LQ5H9L4 462 aa23.51■■□□□ 1.35
SSU72-204ENST00000378726 QTRT2Q9H974 415 aaKnown RBP23.51■■□□□ 1.35
SSU72-204ENST00000378726 DIAPH3Q9NSV4 1193 aa23.51■■□□□ 1.35
SSU72-204ENST00000378726 FBXO3Q9UK99 471 aa23.51■■□□□ 1.35
SSU72-204ENST00000378726 PDE8AO60658 829 aa23.5■■□□□ 1.35
SSU72-204ENST00000378726 TIMM10P62072 90 aa23.5■■□□□ 1.35
SSU72-204ENST00000378726 CTSWP56202 376 aa23.49■■□□□ 1.35
SSU72-204ENST00000378726 CEP126Q9P2H0 1117 aa23.49■■□□□ 1.35
SSU72-204ENST00000378726 ATRNO75882 1429 aa23.49■■□□□ 1.35
SSU72-204ENST00000378726 FAM177BA6PVY3 158 aa23.49■■□□□ 1.35
SSU72-204ENST00000378726 CD2BP2O95400 341 aaKnown RBP23.49■■□□□ 1.35
SSU72-204ENST00000378726 MCCP23508 829 aa23.49■■□□□ 1.35
SSU72-204ENST00000378726 RUFY2Q8WXA3 655 aa23.49■■□□□ 1.35
SSU72-204ENST00000378726 GREM2Q9H772 168 aa23.49■■□□□ 1.35
SSU72-204ENST00000378726 PANK2Q9BZ23 570 aa23.48■■□□□ 1.35
SSU72-204ENST00000378726 CICQ96RK0 1608 aaPredicted RBP23.48■■□□□ 1.35
SSU72-204ENST00000378726 EPB41L2O43491 1005 aaKnown RBP23.48■■□□□ 1.35
SSU72-204ENST00000378726 ITGA6P23229 1130 aa23.48■■□□□ 1.35
SSU72-204ENST00000378726 PARP10Q53GL7 1025 aa23.48■■□□□ 1.35
SSU72-204ENST00000378726 UTP14AQ9BVJ6 771 aaKnown RBP23.48■■□□□ 1.35
SSU72-204ENST00000378726 NIP7Q9Y221 180 aaKnown RBP eCLIP23.48■■□□□ 1.35
SSU72-204ENST00000378726 AK9Q5TCS8 1911 aa23.47■■□□□ 1.35
SSU72-204ENST00000378726 RREB1Q92766 1687 aa23.47■■□□□ 1.35
SSU72-204ENST00000378726 ANKRD36CQ5JPF3 1778 aa23.47■■□□□ 1.35
SSU72-204ENST00000378726 ANKRD18BA2A2Z9 1011 aa23.47■■□□□ 1.35
SSU72-204ENST00000378726 SH3TC1Q8TE82 1336 aa23.46■■□□□ 1.35
SSU72-204ENST00000378726 ZNF652Q9Y2D9 606 aa23.46■■□□□ 1.35
SSU72-204ENST00000378726 CNTNAP4Q9C0A0 1308 aa23.46■■□□□ 1.35
SSU72-204ENST00000378726 HIP1O00291 1037 aa23.45■■□□□ 1.35
SSU72-204ENST00000378726 KIAA1211Q6ZU35 1233 aa23.45■■□□□ 1.35
SSU72-204ENST00000378726 AK7Q96M32 723 aa23.45■■□□□ 1.35
SSU72-204ENST00000378726 FSD1Q9BTV5 496 aa23.45■■□□□ 1.35
SSU72-204ENST00000378726 A0A1B0GUL7 405 aa23.45■■□□□ 1.34
SSU72-204ENST00000378726 RC3H1Q5TC82 1133 aaKnown RBP23.45■■□□□ 1.34
SSU72-204ENST00000378726 CLEC4GQ6UXB4 293 aa23.45■■□□□ 1.34
SSU72-204ENST00000378726 LDHAL6AQ6ZMR3 332 aa23.45■■□□□ 1.34
SSU72-204ENST00000378726 CCNL1Q9UK58 526 aaPredicted RBP23.45■■□□□ 1.34
SSU72-204ENST00000378726 DDX11L8A8MPP1 907 aa23.44■■□□□ 1.34
SSU72-204ENST00000378726 K7ELQ4 463 aaPredicted RBP23.44■■□□□ 1.34
SSU72-204ENST00000378726 HCLS1P14317 486 aaPredicted RBP23.44■■□□□ 1.34
SSU72-204ENST00000378726 EDC3Q96F86 508 aaKnown RBP23.44■■□□□ 1.34
SSU72-204ENST00000378726 LSG1Q9H089 658 aaKnown RBP23.44■■□□□ 1.34
SSU72-204ENST00000378726 PALD1Q9ULE6 856 aa23.44■■□□□ 1.34
SSU72-204ENST00000378726 AKAP2Q9Y2D5 859 aa23.44■■□□□ 1.34
SSU72-204ENST00000378726 ZNF831Q5JPB2 1677 aa23.44■■□□□ 1.34
SSU72-204ENST00000378726 ANAPC15P60006 121 aa23.43■■□□□ 1.34
SSU72-204ENST00000378726 HAUS7Q99871 368 aa23.43■■□□□ 1.34
SSU72-204ENST00000378726 RIPOR2Q9Y4F9 1068 aa23.43■■□□□ 1.34
SSU72-204ENST00000378726 SMIM5Q71RC9 77 aa23.43■■□□□ 1.34
SSU72-204ENST00000378726 TNPO1Q92973 898 aaKnown RBP23.43■■□□□ 1.34
SSU72-204ENST00000378726 DNAJC2Q99543 621 aaKnown RBP23.43■■□□□ 1.34
SSU72-204ENST00000378726 NDUFB9Q9Y6M9 179 aa23.43■■□□□ 1.34
SSU72-204ENST00000378726 COL5A3P25940 1745 aaPredicted RBP23.42■■□□□ 1.34
SSU72-204ENST00000378726 RPS6KA4O75676 772 aa23.41■■□□□ 1.34
SSU72-204ENST00000378726 HSPA4P34932 840 aa23.41■■□□□ 1.34
SSU72-204ENST00000378726 FAM227BQ96M60 508 aa23.41■■□□□ 1.34
SSU72-204ENST00000378726 CNNM1Q9NRU3 951 aa23.41■■□□□ 1.34
SSU72-204ENST00000378726 ST18O60284 1047 aa23.41■■□□□ 1.34
SSU72-204ENST00000378726 NTSR2O95665 410 aa23.41■■□□□ 1.34
SSU72-204ENST00000378726 NMIQ13287 307 aaPredicted RBP23.41■■□□□ 1.34
SSU72-204ENST00000378726 BTAF1O14981 1849 aa23.41■■□□□ 1.34
SSU72-204ENST00000378726 RAD50Q92878 1312 aa23.41■■□□□ 1.34
SSU72-204ENST00000378726 NHSQ6T4R5 1651 aa23.4■■□□□ 1.34
SSU72-204ENST00000378726 METTL24Q5JXM2 366 aa23.4■■□□□ 1.34
SSU72-204ENST00000378726 HSP90B1P14625 803 aaKnown RBP23.39■■□□□ 1.34
SSU72-204ENST00000378726 ZNF609O15014 1411 aa23.39■■□□□ 1.33
SSU72-204ENST00000378726 GNPATO15228 680 aa23.39■■□□□ 1.33
SSU72-204ENST00000378726 NEK4P51957 841 aa23.39■■□□□ 1.33
SSU72-204ENST00000378726 XAGE2Q96GT9 111 aa23.39■■□□□ 1.33
SSU72-204ENST00000378726 BCL11BQ9C0K0 894 aaPredicted RBP23.39■■□□□ 1.33
SSU72-204ENST00000378726 FOXD4L1Q9NU39 408 aa23.39■■□□□ 1.33
SSU72-204ENST00000378726 CIZ1Q9ULV3 898 aaPredicted RBP23.39■■□□□ 1.33
SSU72-204ENST00000378726 HSP90AA1P07900 732 aaKnown RBP23.38■■□□□ 1.33
SSU72-204ENST00000378726 MRE11P49959 708 aa23.38■■□□□ 1.33
SSU72-204ENST00000378726 PTH1RQ03431 593 aa23.38■■□□□ 1.33
SSU72-204ENST00000378726 RAB3GAP1Q15042 981 aa23.38■■□□□ 1.33
SSU72-204ENST00000378726 GORABQ5T7V8 394 aa23.38■■□□□ 1.33
SSU72-204ENST00000378726 CCDC158Q5M9N0 1113 aa23.37■■□□□ 1.33
SSU72-204ENST00000378726 DDX46Q7L014 1031 aaKnown RBP23.37■■□□□ 1.33
SSU72-204ENST00000378726 IL17RAQ96F46 866 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms