RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 CSF1RP07333 972 aa26.64■■□□□ 1.86
CBWD3-202ENST00000377342 LMBR1LQ6UX01 489 aa26.64■■□□□ 1.86
CBWD3-202ENST00000377342 TTLL11Q8NHH1 800 aa26.64■■□□□ 1.86
CBWD3-202ENST00000377342 POLD1P28340 1107 aa26.63■■□□□ 1.85
CBWD3-202ENST00000377342 HSP90B1P14625 803 aaKnown RBP26.62■■□□□ 1.85
CBWD3-202ENST00000377342 FAM161AQ3B820 660 aa26.62■■□□□ 1.85
CBWD3-202ENST00000377342 RTL9Q8NET4 1388 aa26.62■■□□□ 1.85
CBWD3-202ENST00000377342 ATP8B2P98198 1209 aa26.61■■□□□ 1.85
CBWD3-202ENST00000377342 SF3B3Q15393 1217 aaKnown RBP26.61■■□□□ 1.85
CBWD3-202ENST00000377342 RPAP2Q8IXW5 612 aaPredicted RBP26.61■■□□□ 1.85
CBWD3-202ENST00000377342 CCDC85AQ96PX6 553 aaPredicted RBP26.61■■□□□ 1.85
CBWD3-202ENST00000377342 BRIP1Q9BX63 1249 aa26.61■■□□□ 1.85
CBWD3-202ENST00000377342 GREM2Q9H772 168 aa26.61■■□□□ 1.85
CBWD3-202ENST00000377342 CRY2Q49AN0 593 aa26.6■■□□□ 1.85
CBWD3-202ENST00000377342 KLRG2A4D1S0 409 aaPredicted RBP26.6■■□□□ 1.85
CBWD3-202ENST00000377342 POLA2Q14181 598 aa26.6■■□□□ 1.85
CBWD3-202ENST00000377342 NLRP3Q96P20 1036 aa26.6■■□□□ 1.85
CBWD3-202ENST00000377342 CACNA1SQ13698 1873 aa26.59■■□□□ 1.85
CBWD3-202ENST00000377342 SRGAP3O43295 1099 aa26.59■■□□□ 1.85
CBWD3-202ENST00000377342 SSH3Q8TE77 659 aa26.59■■□□□ 1.85
CBWD3-202ENST00000377342 SPON1Q9HCB6 807 aa26.59■■□□□ 1.85
CBWD3-202ENST00000377342 RFX5P48382 616 aaPredicted RBP26.58■■□□□ 1.85
CBWD3-202ENST00000377342 CHMP3Q9Y3E7 222 aa26.58■■□□□ 1.85
CBWD3-202ENST00000377342 GTF3C3Q9Y5Q9 886 aa26.58■■□□□ 1.85
CBWD3-202ENST00000377342 CCDC152Q4G0S7 254 aa26.57■■□□□ 1.84
CBWD3-202ENST00000377342 A0A1B0GUL6 1792 aa26.57■■□□□ 1.84
CBWD3-202ENST00000377342 BRCA1P38398 1863 aaKnown RBP26.56■■□□□ 1.84
CBWD3-202ENST00000377342 HDAC1Q13547 482 aaPredicted RBP26.56■■□□□ 1.84
CBWD3-202ENST00000377342 SEC31BQ9NQW1 1179 aa26.56■■□□□ 1.84
CBWD3-202ENST00000377342 ITGA6P23229 1130 aa26.55■■□□□ 1.84
CBWD3-202ENST00000377342 IGHDP01880 384 aa26.54■■□□□ 1.84
CBWD3-202ENST00000377342 KLHDC4Q8TBB5 520 aa26.54■■□□□ 1.84
CBWD3-202ENST00000377342 PDE6BP35913 854 aa26.54■■□□□ 1.84
CBWD3-202ENST00000377342 PPP4R2Q9NY27 417 aa26.54■■□□□ 1.84
CBWD3-202ENST00000377342 HMMRO75330 724 aa26.53■■□□□ 1.84
CBWD3-202ENST00000377342 PTPN12Q05209 780 aaKnown RBP26.53■■□□□ 1.84
CBWD3-202ENST00000377342 PA2G4Q9UQ80 394 aaKnown RBP26.53■■□□□ 1.84
CBWD3-202ENST00000377342 LRRC37AA6NMS7 1700 aa26.52■■□□□ 1.84
CBWD3-202ENST00000377342 SRGNP10124 158 aa26.52■■□□□ 1.84
CBWD3-202ENST00000377342 IFIT5Q13325 482 aaKnown RBP26.52■■□□□ 1.84
CBWD3-202ENST00000377342 ZNF594Q96JF6 807 aaPredicted RBP26.52■■□□□ 1.84
CBWD3-202ENST00000377342 CCDC57Q2TAC2 916 aa26.51■■□□□ 1.83
CBWD3-202ENST00000377342 SRCAPQ6ZRS2 3230 aa26.51■■□□□ 1.83
CBWD3-202ENST00000377342 ANKRD18BA2A2Z9 1011 aa26.5■■□□□ 1.83
CBWD3-202ENST00000377342 HOXA10P31260 410 aaPredicted RBP26.5■■□□□ 1.83
CBWD3-202ENST00000377342 RPGRQ92834 1020 aaKnown RBP26.5■■□□□ 1.83
CBWD3-202ENST00000377342 COPRSQ9NQ92 184 aa26.5■■□□□ 1.83
CBWD3-202ENST00000377342 CHRNA5P30532 468 aa26.5■■□□□ 1.83
CBWD3-202ENST00000377342 B4GALNT3Q6L9W6 998 aa26.5■■□□□ 1.83
CBWD3-202ENST00000377342 C2CD5Q86YS7 1000 aa26.5■■□□□ 1.83
CBWD3-202ENST00000377342 CELF1Q92879 486 aaKnown RBP26.5■■□□□ 1.83
CBWD3-202ENST00000377342 KDM2BQ8NHM5 1336 aa26.49■■□□□ 1.83
CBWD3-202ENST00000377342 SLX4Q8IY92 1834 aa26.48■■□□□ 1.83
CBWD3-202ENST00000377342 CCDC136Q96JN2 1154 aa26.48■■□□□ 1.83
CBWD3-202ENST00000377342 NPR1P16066 1061 aa26.47■■□□□ 1.83
CBWD3-202ENST00000377342 DDX46Q7L014 1031 aaKnown RBP26.47■■□□□ 1.83
CBWD3-202ENST00000377342 RWDD1Q9H446 243 aaPredicted RBP26.47■■□□□ 1.83
CBWD3-202ENST00000377342 CDC5LQ99459 802 aaKnown RBP26.47■■□□□ 1.83
CBWD3-202ENST00000377342 SIL1Q9H173 461 aa26.47■■□□□ 1.83
CBWD3-202ENST00000377342 EXOC6BQ9Y2D4 811 aa26.47■■□□□ 1.83
CBWD3-202ENST00000377342 NOP58Q9Y2X3 529 aaKnown RBP26.47■■□□□ 1.83
CBWD3-202ENST00000377342 CD2APQ9Y5K6 639 aa26.47■■□□□ 1.83
CBWD3-202ENST00000377342 H0YIN7 160 aa26.46■■□□□ 1.83
CBWD3-202ENST00000377342 GRAPQ13588 217 aa26.46■■□□□ 1.83
CBWD3-202ENST00000377342 GRAPLQ8TC17 118 aaPredicted RBP26.46■■□□□ 1.83
CBWD3-202ENST00000377342 MASTLQ96GX5 879 aa26.46■■□□□ 1.83
CBWD3-202ENST00000377342 CRAMP1Q96RY5 1269 aa26.46■■□□□ 1.83
CBWD3-202ENST00000377342 PUS3Q9BZE2 481 aaKnown RBP26.46■■□□□ 1.83
CBWD3-202ENST00000377342 DCTPP1Q9H773 170 aa26.46■■□□□ 1.83
CBWD3-202ENST00000377342 PDZRN3Q9UPQ7 1066 aa26.46■■□□□ 1.83
CBWD3-202ENST00000377342 SLC51AQ86UW1 340 aa26.45■■□□□ 1.82
CBWD3-202ENST00000377342 RBM17Q96I25 401 aaKnown RBP26.45■■□□□ 1.82
CBWD3-202ENST00000377342 SURF6O75683 361 aaKnown RBP26.44■■□□□ 1.82
CBWD3-202ENST00000377342 DPEP1P16444 411 aa26.44■■□□□ 1.82
CBWD3-202ENST00000377342 KCNA3P22001 575 aa26.44■■□□□ 1.82
CBWD3-202ENST00000377342 LRRC24Q50LG9 513 aa26.44■■□□□ 1.82
CBWD3-202ENST00000377342 TAF7LQ5H9L4 462 aa26.44■■□□□ 1.82
CBWD3-202ENST00000377342 STYK1Q6J9G0 422 aa26.44■■□□□ 1.82
CBWD3-202ENST00000377342 LTBP1Q14766 1721 aa26.44■■□□□ 1.82
CBWD3-202ENST00000377342 ATG9AQ7Z3C6 839 aa26.44■■□□□ 1.82
CBWD3-202ENST00000377342 SMC5Q8IY18 1101 aa26.44■■□□□ 1.82
CBWD3-202ENST00000377342 KLHL34Q8N239 644 aa26.44■■□□□ 1.82
CBWD3-202ENST00000377342 EYA2O00167 538 aa26.43■■□□□ 1.82
CBWD3-202ENST00000377342 ANKRD18AQ8IVF6 992 aa26.43■■□□□ 1.82
CBWD3-202ENST00000377342 PPP1R1BQ9UD71 204 aaPredicted RBP26.43■■□□□ 1.82
CBWD3-202ENST00000377342 A0A0G2JLW4 131 aa26.42■■□□□ 1.82
CBWD3-202ENST00000377342 TGFB2P61812 414 aa26.42■■□□□ 1.82
CBWD3-202ENST00000377342 RPS8P62241 208 aaKnown RBP26.42■■□□□ 1.82
CBWD3-202ENST00000377342 GOLGB1Q14789 3259 aaKnown RBP26.42■■□□□ 1.82
CBWD3-202ENST00000377342 CIAO1O76071 339 aa26.41■■□□□ 1.82
CBWD3-202ENST00000377342 IGHMBP2P38935 993 aaKnown RBP26.41■■□□□ 1.82
CBWD3-202ENST00000377342 LDHAL6AQ6ZMR3 332 aa26.41■■□□□ 1.82
CBWD3-202ENST00000377342 NLGN2Q8NFZ4 835 aa26.41■■□□□ 1.82
CBWD3-202ENST00000377342 ZNF622Q969S3 477 aaKnown RBP eCLIP26.41■■□□□ 1.82
CBWD3-202ENST00000377342 FBXO3Q9UK99 471 aa26.41■■□□□ 1.82
CBWD3-202ENST00000377342 RIPOR2Q9Y4F9 1068 aa26.41■■□□□ 1.82
CBWD3-202ENST00000377342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.41■■□□□ 1.82
CBWD3-202ENST00000377342 GCC1Q96CN9 775 aa26.4■■□□□ 1.82
CBWD3-202ENST00000377342 FHDC1Q9C0D6 1143 aaPredicted RBP26.4■■□□□ 1.82
CBWD3-202ENST00000377342 BSDC1Q9NW68 430 aaPredicted RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms