RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 TNMDQ9H2S6 317 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 DACT1Q9NYF0 836 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 HAND2P61296 217 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 TTC6Q86TZ1 520 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 FMNL2Q96PY5 1086 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 ERBB3P21860 1342 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 TPM2P07951 284 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 PHKG2P15735 406 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 PDIA6Q15084 440 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 MAP4K1Q92918 833 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 PDLIM2Q96JY6 352 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 NEK1Q96PY6 1258 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 NUP62CLQ9H1M0 184 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 KAT6BQ8WYB5 2073 aa15.33■□□□□ 0.05
USP11-204ENST00000377107 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.33■□□□□ 0.05
USP11-204ENST00000377107 MTX1Q13505 466 aa15.33■□□□□ 0.04
USP11-204ENST00000377107 TTLL7Q6ZT98 887 aa15.33■□□□□ 0.04
USP11-204ENST00000377107 LUZP1Q86V48 1076 aa15.33■□□□□ 0.04
USP11-204ENST00000377107 CCDC192P0DO97 292 aa15.32■□□□□ 0.04
USP11-204ENST00000377107 PDCP20941 246 aa15.32■□□□□ 0.04
USP11-204ENST00000377107 NCOA5Q9HCD5 579 aaKnown RBP15.32■□□□□ 0.04
USP11-204ENST00000377107 PRDM11Q9NQV5 511 aa15.32■□□□□ 0.04
USP11-204ENST00000377107 RPS6KB1P23443 525 aa15.32■□□□□ 0.04
USP11-204ENST00000377107 A0A087WWV3 80 aa15.31■□□□□ 0.04
USP11-204ENST00000377107 ST3GAL1Q11201 340 aa15.31■□□□□ 0.04
USP11-204ENST00000377107 TRIM5Q9C035 493 aa15.31■□□□□ 0.04
USP11-204ENST00000377107 CYP27B1O15528 508 aa15.31■□□□□ 0.04
USP11-204ENST00000377107 APOBRQ0VD83 1088 aa15.31■□□□□ 0.04
USP11-204ENST00000377107 MAP3K11Q16584 847 aa15.31■□□□□ 0.04
USP11-204ENST00000377107 SYTL4Q96C24 671 aaPredicted RBP15.31■□□□□ 0.04
USP11-204ENST00000377107 PTPN12Q05209 780 aaKnown RBP15.3■□□□□ 0.04
USP11-204ENST00000377107 ANKRD1Q15327 319 aa15.3■□□□□ 0.04
USP11-204ENST00000377107 ERCC4Q92889 916 aaPredicted RBP15.3■□□□□ 0.04
USP11-204ENST00000377107 RGPD1P0DJD0 1748 aa15.3■□□□□ 0.04
USP11-204ENST00000377107 TAF5LO75529 589 aa15.3■□□□□ 0.04
USP11-204ENST00000377107 FTOQ9C0B1 505 aaKnown RBP eCLIP15.3■□□□□ 0.04
USP11-204ENST00000377107 C19orf44Q9H6X5 657 aa15.3■□□□□ 0.04
USP11-204ENST00000377107 LETM1O95202 739 aaPredicted RBP15.3■□□□□ 0.04
USP11-204ENST00000377107 SASS6Q6UVJ0 657 aa15.3■□□□□ 0.04
USP11-204ENST00000377107 TCHHQ07283 1943 aa15.29■□□□□ 0.04
USP11-204ENST00000377107 A0A0G2JLW4 131 aa15.29■□□□□ 0.04
USP11-204ENST00000377107 EVA1CP58658 441 aa15.29■□□□□ 0.04
USP11-204ENST00000377107 STK11IPQ8N1F8 1099 aa15.29■□□□□ 0.04
USP11-204ENST00000377107 NWD1Q149M9 1564 aa15.29■□□□□ 0.04
USP11-204ENST00000377107 HSPA2P54652 639 aa15.29■□□□□ 0.04
USP11-204ENST00000377107 LRRC24Q50LG9 513 aa15.29■□□□□ 0.04
USP11-204ENST00000377107 RRP9O43818 475 aaKnown RBP15.29■□□□□ 0.04
USP11-204ENST00000377107 IFIT1P09914 478 aaKnown RBP15.29■□□□□ 0.04
USP11-204ENST00000377107 GPTP24298 496 aa15.29■□□□□ 0.04
USP11-204ENST00000377107 HS1BP3Q53T59 392 aa15.29■□□□□ 0.04
USP11-204ENST00000377107 TOB2Q14106 344 aaPredicted RBP15.28■□□□□ 0.04
USP11-204ENST00000377107 ANO6Q4KMQ2 910 aa15.28■□□□□ 0.04
USP11-204ENST00000377107 TTLL5Q6EMB2 1281 aa15.28■□□□□ 0.04
USP11-204ENST00000377107 TM6SF1Q9BZW5 370 aa15.28■□□□□ 0.04
USP11-204ENST00000377107 ARHGAP23Q9P227 1491 aa15.28■□□□□ 0.04
USP11-204ENST00000377107 FMN2Q9NZ56 1722 aa15.28■□□□□ 0.04
USP11-204ENST00000377107 APPP05067 770 aa15.28■□□□□ 0.04
USP11-204ENST00000377107 CYP21A2P08686 494 aa15.28■□□□□ 0.04
USP11-204ENST00000377107 MCMDC2Q4G0Z9 681 aa15.28■□□□□ 0.04
USP11-204ENST00000377107 TOPAZ1Q8N9V7 1692 aa15.28■□□□□ 0.04
USP11-204ENST00000377107 OTUD7BQ6GQQ9 843 aa15.27■□□□□ 0.04
USP11-204ENST00000377107 PUS3Q9BZE2 481 aaKnown RBP15.27■□□□□ 0.04
USP11-204ENST00000377107 NOLC1Q14978 699 aaKnown RBP eCLIP15.27■□□□□ 0.04
USP11-204ENST00000377107 DCAF5Q96JK2 942 aa15.27■□□□□ 0.04
USP11-204ENST00000377107 DNAJC25Q9H1X3 360 aa15.27■□□□□ 0.04
USP11-204ENST00000377107 KIF13AQ9H1H9 1805 aa15.27■□□□□ 0.04
USP11-204ENST00000377107 TYRO3Q06418 890 aa15.27■□□□□ 0.03
USP11-204ENST00000377107 PXDNLA1KZ92 1463 aa15.27■□□□□ 0.03
USP11-204ENST00000377107 ZNF500O60304 480 aaPredicted RBP15.26■□□□□ 0.03
USP11-204ENST00000377107 SF3A1Q15459 793 aaKnown RBP15.26■□□□□ 0.03
USP11-204ENST00000377107 SLIT1O75093 1534 aa15.26■□□□□ 0.03
USP11-204ENST00000377107 ME1P48163 572 aa15.26■□□□□ 0.03
USP11-204ENST00000377107 ZNF592Q92610 1267 aa15.26■□□□□ 0.03
USP11-204ENST00000377107 PAG1Q9NWQ8 432 aa15.26■□□□□ 0.03
USP11-204ENST00000377107 NR1I2O75469 434 aa15.26■□□□□ 0.03
USP11-204ENST00000377107 CEP126Q9P2H0 1117 aa15.26■□□□□ 0.03
USP11-204ENST00000377107 EPB41L2O43491 1005 aaKnown RBP15.25■□□□□ 0.03
USP11-204ENST00000377107 ATP5JP18859 108 aa15.25■□□□□ 0.03
USP11-204ENST00000377107 KRT32Q14532 448 aa15.25■□□□□ 0.03
USP11-204ENST00000377107 ZRSR1Q15695 479 aaKnown RBP15.25■□□□□ 0.03
USP11-204ENST00000377107 FAM89AQ96GI7 184 aa15.25■□□□□ 0.03
USP11-204ENST00000377107 SCAND2PQ9GZW5 306 aaPredicted RBP15.25■□□□□ 0.03
USP11-204ENST00000377107 GPHNQ9NQX3 736 aaPredicted RBP15.25■□□□□ 0.03
USP11-204ENST00000377107 CWC25Q9NXE8 425 aaPredicted RBP15.25■□□□□ 0.03
USP11-204ENST00000377107 NALCNQ8IZF0 1738 aa15.25■□□□□ 0.03
USP11-204ENST00000377107 PTGS1P23219 599 aa15.25■□□□□ 0.03
USP11-204ENST00000377107 CCDC57Q2TAC2 916 aa15.25■□□□□ 0.03
USP11-204ENST00000377107 LEO1Q8WVC0 666 aaPredicted RBP15.25■□□□□ 0.03
USP11-204ENST00000377107 ADGRL3Q9HAR2 1447 aa15.25■□□□□ 0.03
USP11-204ENST00000377107 U3KPZ7 1027 aaPredicted RBP15.25■□□□□ 0.03
USP11-204ENST00000377107 USP42Q9H9J4 1324 aaKnown RBP15.25■□□□□ 0.03
USP11-204ENST00000377107 POLR3DP05423 398 aaPredicted RBP15.25■□□□□ 0.03
USP11-204ENST00000377107 TTC39AQ5SRH9 613 aa15.25■□□□□ 0.03
USP11-204ENST00000377107 BECN2A8MW95 431 aa15.24■□□□□ 0.03
USP11-204ENST00000377107 GOLGA6L19H0YKK7 550 aa15.24■□□□□ 0.03
USP11-204ENST00000377107 COPRSQ9NQ92 184 aa15.24■□□□□ 0.03
USP11-204ENST00000377107 GOLGA6L6A8MZA4 724 aa15.24■□□□□ 0.03
USP11-204ENST00000377107 A0A1B0GUL7 405 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms