RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 ZNF396Q96N95 335 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-204ENST00000375608 MYD88Q99836 296 aa16.08■□□□□ 0.16
MCF2L-204ENST00000375608 ST7Q9NRC1 585 aa16.08■□□□□ 0.16
MCF2L-204ENST00000375608 IFNKQ9P0W0 207 aa16.08■□□□□ 0.16
MCF2L-204ENST00000375608 TMEM87AQ8NBN3 555 aa16.08■□□□□ 0.16
MCF2L-204ENST00000375608 BICC1Q9H694 974 aaKnown RBP16.08■□□□□ 0.16
MCF2L-204ENST00000375608 ARHGEF40Q8TER5 1519 aa16.08■□□□□ 0.16
MCF2L-204ENST00000375608 FKBP4Q02790 459 aaKnown RBP eCLIP16.07■□□□□ 0.161e-6■■■■□ 21.9
MCF2L-204ENST00000375608 UTP14CQ5TAP6 766 aaKnown RBP16.07■□□□□ 0.16
MCF2L-204ENST00000375608 PLCD3Q8N3E9 789 aa16.07■□□□□ 0.16
MCF2L-204ENST00000375608 CHMP4AQ9BY43 222 aa16.07■□□□□ 0.16
MCF2L-204ENST00000375608 SLU7O95391 586 aaKnown RBP16.07■□□□□ 0.16
MCF2L-204ENST00000375608 RPS6KB1P23443 525 aa16.07■□□□□ 0.16
MCF2L-204ENST00000375608 ZNF589Q86UQ0 364 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-204ENST00000375608 SNRKQ9NRH2 765 aa16.07■□□□□ 0.16
MCF2L-204ENST00000375608 ARGLU1Q9NWB6 273 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-204ENST00000375608 DBF4Q9UBU7 674 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-204ENST00000375608 AMOTL2Q9Y2J4 779 aa16.07■□□□□ 0.16
MCF2L-204ENST00000375608 ARHGAP29Q52LW3 1261 aa16.07■□□□□ 0.16
MCF2L-204ENST00000375608 PRAMEF22A3QJZ6 481 aa16.06■□□□□ 0.16
MCF2L-204ENST00000375608 GOLIM4O00461 696 aa16.06■□□□□ 0.16
MCF2L-204ENST00000375608 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
MCF2L-204ENST00000375608 TEX35Q5T0J7 233 aa16.06■□□□□ 0.16
MCF2L-204ENST00000375608 ZNF397Q8NF99 534 aaPredicted RBP16.06■□□□□ 0.16
MCF2L-204ENST00000375608 YEATS2Q9ULM3 1422 aa16.06■□□□□ 0.16
MCF2L-204ENST00000375608 MARCKSP29966 332 aaPredicted RBP16.06■□□□□ 0.16
MCF2L-204ENST00000375608 NOL10Q9BSC4 688 aaKnown RBP16.06■□□□□ 0.16
MCF2L-204ENST00000375608 CAMSAP1Q5T5Y3 1602 aa16.06■□□□□ 0.16
MCF2L-204ENST00000375608 PROSER3Q2NL68 480 aa16.06■□□□□ 0.16
MCF2L-204ENST00000375608 LRRC8AQ8IWT6 810 aa16.06■□□□□ 0.16
MCF2L-204ENST00000375608 TTC41PQ6P2S7 1318 aa16.06■□□□□ 0.16
MCF2L-204ENST00000375608 NRXN1Q9ULB1 1477 aa16.05■□□□□ 0.16
MCF2L-204ENST00000375608 SLFNL1Q499Z3 407 aa16.05■□□□□ 0.16
MCF2L-204ENST00000375608 PGBD1Q96JS3 809 aa16.05■□□□□ 0.16
MCF2L-204ENST00000375608 SSH2Q76I76 1423 aa16.05■□□□□ 0.16
MCF2L-204ENST00000375608 TMCO3Q6UWJ1 677 aa16.05■□□□□ 0.16
MCF2L-204ENST00000375608 SETBP1Q9Y6X0 1596 aa16.05■□□□□ 0.16
MCF2L-204ENST00000375608 UBE3BQ7Z3V4 1068 aa16.05■□□□□ 0.16
MCF2L-204ENST00000375608 TCHHQ07283 1943 aa16.04■□□□□ 0.16
MCF2L-204ENST00000375608 CD163L1Q9NR16 1453 aa16.04■□□□□ 0.16
MCF2L-204ENST00000375608 KRT32Q14532 448 aa16.04■□□□□ 0.16
MCF2L-204ENST00000375608 HSP90AB3PQ58FF7 597 aa16.04■□□□□ 0.16
MCF2L-204ENST00000375608 SUCLG2Q96I99 432 aa16.04■□□□□ 0.16
MCF2L-204ENST00000375608 USP28Q96RU2 1077 aa16.04■□□□□ 0.16
MCF2L-204ENST00000375608 KIAA1210Q9ULL0 1709 aa16.04■□□□□ 0.16
MCF2L-204ENST00000375608 GRM8O00222 908 aa16.04■□□□□ 0.16
MCF2L-204ENST00000375608 TAF7LQ5H9L4 462 aa16.04■□□□□ 0.16
MCF2L-204ENST00000375608 PTPDC1A2A3K4 754 aa16.04■□□□□ 0.16
MCF2L-204ENST00000375608 PLEKHO1Q53GL0 409 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-204ENST00000375608 BEND3Q5T5X7 828 aa16.04■□□□□ 0.16
MCF2L-204ENST00000375608 CCDC34Q96HJ3 373 aa16.04■□□□□ 0.16
MCF2L-204ENST00000375608 SLC3A2P08195 630 aaKnown RBP16.03■□□□□ 0.16
MCF2L-204ENST00000375608 GOLGA8FQ08AF8 430 aa16.03■□□□□ 0.16
MCF2L-204ENST00000375608 GOLGA8DPQ0D2H9 430 aa16.03■□□□□ 0.16
MCF2L-204ENST00000375608 CCDC82Q8N4S0 544 aa16.03■□□□□ 0.16
MCF2L-204ENST00000375608 NLRP2Q9NX02 1062 aa16.03■□□□□ 0.16
MCF2L-204ENST00000375608 CTNNA3Q9UI47 895 aa16.03■□□□□ 0.16
MCF2L-204ENST00000375608 FLT4P35916 1363 aa16.03■□□□□ 0.16
MCF2L-204ENST00000375608 PES1O00541 588 aaKnown RBP16.02■□□□□ 0.16
MCF2L-204ENST00000375608 NECTIN1Q15223 517 aa16.02■□□□□ 0.16
MCF2L-204ENST00000375608 ESCO1Q5FWF5 840 aa16.02■□□□□ 0.16
MCF2L-204ENST00000375608 FBXO38Q6PIJ6 1188 aa16.02■□□□□ 0.16
MCF2L-204ENST00000375608 RALYLQ86SE5 291 aaKnown RBP16.02■□□□□ 0.16
MCF2L-204ENST00000375608 AOX1Q06278 1338 aa16.02■□□□□ 0.16
MCF2L-204ENST00000375608 FUCA2Q9BTY2 467 aa16.02■□□□□ 0.16
MCF2L-204ENST00000375608 UHRF1BP1LA0JNW5 1464 aa16.02■□□□□ 0.16
MCF2L-204ENST00000375608 SALL3Q9BXA9 1300 aa16.02■□□□□ 0.15
MCF2L-204ENST00000375608 HOXC9P31274 260 aa16.02■□□□□ 0.15
MCF2L-204ENST00000375608 AATKQ6ZMQ8 1374 aa16.02■□□□□ 0.15
MCF2L-204ENST00000375608 CPSF1Q10570 1443 aaKnown RBP16.01■□□□□ 0.15
MCF2L-204ENST00000375608 KMT5BQ4FZB7 885 aa16.01■□□□□ 0.15
MCF2L-204ENST00000375608 CPLX3Q8WVH0 158 aa16.01■□□□□ 0.15
MCF2L-204ENST00000375608 MAP4K1Q92918 833 aa16.01■□□□□ 0.15
MCF2L-204ENST00000375608 C8orf76Q96K31 380 aa16.01■□□□□ 0.15
MCF2L-204ENST00000375608 TIGD1Q96MW7 591 aa16.01■□□□□ 0.15
MCF2L-204ENST00000375608 TM6SF1Q9BZW5 370 aa16.01■□□□□ 0.15
MCF2L-204ENST00000375608 PTPRMP28827 1452 aa16.01■□□□□ 0.15
MCF2L-204ENST00000375608 BMS1Q14692 1282 aaKnown RBP16.01■□□□□ 0.15
MCF2L-204ENST00000375608 TTC5Q8N0Z6 440 aa16.01■□□□□ 0.15
MCF2L-204ENST00000375608 XPO4Q9C0E2 1151 aaKnown RBP16.01■□□□□ 0.15
MCF2L-204ENST00000375608 CDK12Q9NYV4 1490 aaPredicted RBP16■□□□□ 0.15
MCF2L-204ENST00000375608 MAP3K5Q99683 1374 aa16■□□□□ 0.15
MCF2L-204ENST00000375608 TFCP2Q12800 502 aa16■□□□□ 0.15
MCF2L-204ENST00000375608 KSR2Q6VAB6 950 aa16■□□□□ 0.15
MCF2L-204ENST00000375608 NFXL1Q6ZNB6 911 aa16■□□□□ 0.15
MCF2L-204ENST00000375608 TDRD7Q8NHU6 1098 aaKnown RBP16■□□□□ 0.15
MCF2L-204ENST00000375608 ZSCAN16Q9H4T2 348 aaPredicted RBP16■□□□□ 0.15
MCF2L-204ENST00000375608 RXRAP19793 462 aa16■□□□□ 0.15
MCF2L-204ENST00000375608 EIF4A1P60842 406 aaKnown RBP16■□□□□ 0.15
MCF2L-204ENST00000375608 DBNDD2Q9BQY9 259 aa16■□□□□ 0.15
MCF2L-204ENST00000375608 UTP14AQ9BVJ6 771 aaKnown RBP16■□□□□ 0.15
MCF2L-204ENST00000375608 CTAGE5O15320 804 aa16■□□□□ 0.15
MCF2L-204ENST00000375608 NEMFO60524 1076 aa16■□□□□ 0.15
MCF2L-204ENST00000375608 COPS6Q7L5N1 327 aa16■□□□□ 0.15
MCF2L-204ENST00000375608 ZC3H6P61129 1189 aaKnown RBP15.99■□□□□ 0.15
MCF2L-204ENST00000375608 OLFM4Q6UX06 510 aa15.99■□□□□ 0.15
MCF2L-204ENST00000375608 MRPS27Q92552 414 aaKnown RBP15.99■□□□□ 0.15
MCF2L-204ENST00000375608 ERO1AQ96HE7 468 aa15.99■□□□□ 0.15
MCF2L-204ENST00000375608 GNG11P61952 73 aa15.99■□□□□ 0.15
MCF2L-204ENST00000375608 TIMM10P62072 90 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms