RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 HSP90AB3PQ58FF7 597 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 CACNA2D4Q7Z3S7 1137 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 SLC26A6Q9BXS9 759 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 ADGRL2O95490 1459 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 SLC5A1P13866 664 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 TTF1Q15361 905 aaPredicted RBP13.3□□□□□ -0.28
PTCH1-203ENST00000375274 CAVIN4Q5BKX8 364 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 LUZP1Q86V48 1076 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.3□□□□□ -0.28
PTCH1-203ENST00000375274 V9GYY5 206 aaPredicted RBP13.3□□□□□ -0.28
PTCH1-203ENST00000375274 MSH6P52701 1360 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 NPATQ14207 1427 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 SHTN1A0MZ66 631 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 USO1O60763 962 aaKnown RBP13.3□□□□□ -0.28
PTCH1-203ENST00000375274 CPA1P15085 419 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 LMOD1P29536 600 aaPredicted RBP13.3□□□□□ -0.28
PTCH1-203ENST00000375274 CCDC194A0A1B0GVG4 234 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 ZFYP08048 801 aaPredicted RBP13.29□□□□□ -0.28
PTCH1-203ENST00000375274 CEBPAP49715 358 aaPredicted RBP13.29□□□□□ -0.28
PTCH1-203ENST00000375274 NLRP5P59047 1200 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 G2E3Q7L622 706 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 TAX1BP1Q86VP1 789 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 KIAA0556O60303 1618 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 GPTP24298 496 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 USP5P45974 858 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 ALG1Q9BT22 464 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 MKNK2Q9HBH9 465 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 LMBRD1Q9NUN5 540 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 GOLGA6L7A0A1B0GV03 622 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 LMBR1LQ6UX01 489 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 RUFY3Q7L099 469 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 CATIPQ7Z7H3 387 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 SMARCC1Q92922 1105 aaPredicted RBP13.29□□□□□ -0.28
PTCH1-203ENST00000375274 CCDC94Q9BW85 323 aaPredicted RBP13.29□□□□□ -0.28
PTCH1-203ENST00000375274 ARFGAP3Q9NP61 516 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 PODXL2Q9NZ53 605 aa13.29□□□□□ -0.28
PTCH1-203ENST00000375274 HSP90AA4PQ58FG1 418 aa13.28□□□□□ -0.28
PTCH1-203ENST00000375274 ANKRD24Q8TF21 1146 aa13.28□□□□□ -0.28
PTCH1-203ENST00000375274 N4BP3O15049 544 aa13.28□□□□□ -0.28
PTCH1-203ENST00000375274 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
PTCH1-203ENST00000375274 FLT4P35916 1363 aa13.28□□□□□ -0.28
PTCH1-203ENST00000375274 SPTLC2O15270 562 aa13.28□□□□□ -0.28
PTCH1-203ENST00000375274 LMAN1P49257 510 aa13.28□□□□□ -0.28
PTCH1-203ENST00000375274 SEPT11Q9NVA2 429 aaKnown RBP13.28□□□□□ -0.28
PTCH1-203ENST00000375274 ZBTB43O43298 467 aa13.28□□□□□ -0.28
PTCH1-203ENST00000375274 MARCKSP29966 332 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-203ENST00000375274 MFSD6Q6ZSS7 791 aa13.28□□□□□ -0.28
PTCH1-203ENST00000375274 ZNF287Q9HBT7 754 aa13.28□□□□□ -0.28
PTCH1-203ENST00000375274 NEFHP12036 1026 aa13.27□□□□□ -0.28
PTCH1-203ENST00000375274 BICDL1Q6ZP65 573 aa13.27□□□□□ -0.28
PTCH1-203ENST00000375274 CWF19L2Q2TBE0 894 aaKnown RBP13.27□□□□□ -0.29
PTCH1-203ENST00000375274 EYA1Q99502 592 aa13.27□□□□□ -0.29
PTCH1-203ENST00000375274 TUBB4AP04350 444 aa13.27□□□□□ -0.29
PTCH1-203ENST00000375274 TDRD12Q587J7 1177 aaKnown RBP13.27□□□□□ -0.29
PTCH1-203ENST00000375274 SEC63Q9UGP8 760 aaKnown RBP13.27□□□□□ -0.29
PTCH1-203ENST00000375274 UBA7P41226 1012 aa13.27□□□□□ -0.29
PTCH1-203ENST00000375274 MTIF2P46199 727 aaKnown RBP13.27□□□□□ -0.29
PTCH1-203ENST00000375274 SLC39A6Q13433 755 aa13.26□□□□□ -0.29
PTCH1-203ENST00000375274 AKAP4Q5JQC9 854 aa13.26□□□□□ -0.29
PTCH1-203ENST00000375274 RAD50Q92878 1312 aa13.26□□□□□ -0.29
PTCH1-203ENST00000375274 FGFR1OPO95684 399 aaKnown RBP13.26□□□□□ -0.29
PTCH1-203ENST00000375274 RTL1A6NKG5 1358 aa13.26□□□□□ -0.29
PTCH1-203ENST00000375274 CHL1O00533 1208 aa13.26□□□□□ -0.29
PTCH1-203ENST00000375274 IL15P40933 162 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-203ENST00000375274 DNA2P51530 1060 aa13.26□□□□□ -0.29
PTCH1-203ENST00000375274 SRRTQ9BXP5 876 aaKnown RBP13.26□□□□□ -0.29
PTCH1-203ENST00000375274 RAB34Q9BZG1 259 aa13.26□□□□□ -0.29
PTCH1-203ENST00000375274 TARBP1Q13395 1621 aaKnown RBP13.26□□□□□ -0.29
PTCH1-203ENST00000375274 DHX32Q7L7V1 743 aaKnown RBP13.25□□□□□ -0.29
PTCH1-203ENST00000375274 TIGD1Q96MW7 591 aa13.25□□□□□ -0.29
PTCH1-203ENST00000375274 PTPDC1A2A3K4 754 aa13.25□□□□□ -0.29
PTCH1-203ENST00000375274 IL13P35225 146 aa13.25□□□□□ -0.29
PTCH1-203ENST00000375274 TMEM63CQ9P1W3 806 aa13.25□□□□□ -0.29
PTCH1-203ENST00000375274 PBRM1Q86U86 1689 aa13.25□□□□□ -0.29
PTCH1-203ENST00000375274 TSG101Q99816 390 aa13.25□□□□□ -0.29
PTCH1-203ENST00000375274 PYM1Q9BRP8 204 aaKnown RBP13.25□□□□□ -0.29
PTCH1-203ENST00000375274 SGSM2O43147 1006 aa13.25□□□□□ -0.29
PTCH1-203ENST00000375274 TCP11L1Q9NUJ3 509 aa13.25□□□□□ -0.29
PTCH1-203ENST00000375274 ZNF652Q9Y2D9 606 aa13.25□□□□□ -0.29
PTCH1-203ENST00000375274 ZMYM3Q14202 1370 aa13.25□□□□□ -0.29
PTCH1-203ENST00000375274 PTPRTO14522 1441 aa13.25□□□□□ -0.29
PTCH1-203ENST00000375274 APOBRQ0VD83 1088 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 ENOX2Q16206 610 aaKnown RBP13.24□□□□□ -0.29
PTCH1-203ENST00000375274 FAM173BQ6P4H8 233 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 KRT28Q7Z3Y7 464 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 PRC1O43663 620 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 TERF1P54274 439 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 ZNF444Q8N0Y2 327 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-203ENST00000375274 PAG1Q9NWQ8 432 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 IFNKQ9P0W0 207 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 RIMS2Q9UQ26 1411 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 MAP3K19Q56UN5 1328 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 IDEP14735 1019 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 MCM6Q14566 821 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 WTAPQ15007 396 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 CHST3Q7LGC8 479 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 TRMT2AQ8IZ69 625 aaKnown RBP13.24□□□□□ -0.29
PTCH1-203ENST00000375274 SNX14Q9Y5W7 946 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 ABCC1P33527 1531 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 PPP1R12BO60237 982 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms