RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 UBR1Q8IWV7 1749 aa24.14■■□□□ 1.45
TMEFF1-201ENST00000374879 USP6P35125 1406 aa24.14■■□□□ 1.45
TMEFF1-201ENST00000374879 VPS53Q5VIR6 699 aa24.14■■□□□ 1.45
TMEFF1-201ENST00000374879 JAKMIP1Q96N16 626 aaKnown RBP24.14■■□□□ 1.45
TMEFF1-201ENST00000374879 GPS2Q13227 327 aa24.13■■□□□ 1.45
TMEFF1-201ENST00000374879 CAVIN2O95810 425 aa24.13■■□□□ 1.45
TMEFF1-201ENST00000374879 CCT4P50991 539 aaKnown RBP24.13■■□□□ 1.45
TMEFF1-201ENST00000374879 UBXN4Q92575 508 aa24.13■■□□□ 1.45
TMEFF1-201ENST00000374879 SASH3O75995 380 aa24.12■■□□□ 1.45
TMEFF1-201ENST00000374879 CWC27Q6UX04 472 aaKnown RBP24.12■■□□□ 1.45
TMEFF1-201ENST00000374879 LTKP29376 864 aa24.12■■□□□ 1.45
TMEFF1-201ENST00000374879 ATP8B2P98198 1209 aa24.12■■□□□ 1.45
TMEFF1-201ENST00000374879 PEAK1Q9H792 1746 aa24.11■■□□□ 1.45
TMEFF1-201ENST00000374879 LOC102724159A0A0B4J2E5 919 aa24.11■■□□□ 1.45
TMEFF1-201ENST00000374879 PWP2Q15269 919 aaKnown RBP24.11■■□□□ 1.45
TMEFF1-201ENST00000374879 ICE2Q659A1 982 aa24.11■■□□□ 1.45
TMEFF1-201ENST00000374879 SRLQ86TD4 932 aa24.11■■□□□ 1.45
TMEFF1-201ENST00000374879 REXO1L1PQ8IX06 675 aa24.11■■□□□ 1.45
TMEFF1-201ENST00000374879 TOPAZ1Q8N9V7 1692 aa24.1■■□□□ 1.45
TMEFF1-201ENST00000374879 A0A087WWV3 80 aa24.1■■□□□ 1.45
TMEFF1-201ENST00000374879 AOX1Q06278 1338 aa24.1■■□□□ 1.45
TMEFF1-201ENST00000374879 MIS18AQ9NYP9 233 aa24.1■■□□□ 1.45
TMEFF1-201ENST00000374879 CWC15Q9P013 229 aaKnown RBP24.1■■□□□ 1.45
TMEFF1-201ENST00000374879 TPCN1Q9ULQ1 816 aa24.1■■□□□ 1.45
TMEFF1-201ENST00000374879 BECN2A8MW95 431 aa24.09■■□□□ 1.45
TMEFF1-201ENST00000374879 FBXO18Q8NFZ0 1043 aa24.09■■□□□ 1.45
TMEFF1-201ENST00000374879 RRP15Q9Y3B9 282 aaKnown RBP24.09■■□□□ 1.45
TMEFF1-201ENST00000374879 TBC1D8O95759 1140 aa24.09■■□□□ 1.45
TMEFF1-201ENST00000374879 GNAI3P08754 354 aa24.09■■□□□ 1.45
TMEFF1-201ENST00000374879 SMC1AQ14683 1233 aaKnown RBP24.09■■□□□ 1.45
TMEFF1-201ENST00000374879 CTR9Q6PD62 1173 aa24.09■■□□□ 1.45
TMEFF1-201ENST00000374879 SLC26A8Q96RN1 970 aa24.09■■□□□ 1.45
TMEFF1-201ENST00000374879 CYP46A1Q9Y6A2 500 aa24.09■■□□□ 1.45
TMEFF1-201ENST00000374879 USP31Q70CQ4 1352 aa24.08■■□□□ 1.45
TMEFF1-201ENST00000374879 CCDC34Q96HJ3 373 aa24.08■■□□□ 1.45
TMEFF1-201ENST00000374879 ZSWIM6Q9HCJ5 1215 aa24.08■■□□□ 1.45
TMEFF1-201ENST00000374879 PRPF40BQ6NWY9 871 aaKnown RBP24.08■■□□□ 1.44
TMEFF1-201ENST00000374879 DHX40Q8IX18 779 aaKnown RBP24.08■■□□□ 1.44
TMEFF1-201ENST00000374879 PI4K2BQ8TCG2 481 aa24.08■■□□□ 1.44
TMEFF1-201ENST00000374879 EPC1Q9H2F5 836 aa24.08■■□□□ 1.44
TMEFF1-201ENST00000374879 CRB1P82279 1406 aa24.08■■□□□ 1.44
TMEFF1-201ENST00000374879 FOXO3O43524 673 aa24.07■■□□□ 1.44
TMEFF1-201ENST00000374879 PTH1RQ03431 593 aa24.07■■□□□ 1.44
TMEFF1-201ENST00000374879 NBPF11Q86T75 865 aa24.07■■□□□ 1.44
TMEFF1-201ENST00000374879 GOLGA5Q8TBA6 731 aa24.07■■□□□ 1.44
TMEFF1-201ENST00000374879 RGPD1P0DJD0 1748 aa24.07■■□□□ 1.44
TMEFF1-201ENST00000374879 MAP3K19Q56UN5 1328 aa24.07■■□□□ 1.44
TMEFF1-201ENST00000374879 PLEKHG1Q9ULL1 1385 aa24.07■■□□□ 1.44
TMEFF1-201ENST00000374879 NALCNQ8IZF0 1738 aa24.07■■□□□ 1.44
TMEFF1-201ENST00000374879 GSDMDP57764 484 aa24.07■■□□□ 1.44
TMEFF1-201ENST00000374879 ATP8B1O43520 1251 aa24.06■■□□□ 1.44
TMEFF1-201ENST00000374879 LARP1Q6PKG0 1096 aaKnown RBP24.06■■□□□ 1.44
TMEFF1-201ENST00000374879 STX1AQ16623 288 aa24.05■■□□□ 1.44
TMEFF1-201ENST00000374879 DNAI1Q9UI46 699 aa24.05■■□□□ 1.44
TMEFF1-201ENST00000374879 PDCP20941 246 aa24.05■■□□□ 1.44
TMEFF1-201ENST00000374879 MTHFSDQ2M296 383 aaKnown RBP24.05■■□□□ 1.44
TMEFF1-201ENST00000374879 MNS1Q8NEH6 495 aa24.05■■□□□ 1.44
TMEFF1-201ENST00000374879 OSBPL5Q9H0X9 879 aaPredicted RBP24.05■■□□□ 1.44
TMEFF1-201ENST00000374879 PSDA5PKW4 1024 aaPredicted RBP24.04■■□□□ 1.44
TMEFF1-201ENST00000374879 LMAN1P49257 510 aa24.04■■□□□ 1.44
TMEFF1-201ENST00000374879 HOMER1Q86YM7 354 aa24.04■■□□□ 1.44
TMEFF1-201ENST00000374879 TADA3O75528 432 aa24.04■■□□□ 1.44
TMEFF1-201ENST00000374879 TSPYL4Q9UJ04 414 aa24.04■■□□□ 1.44
TMEFF1-201ENST00000374879 ARHGEF10O15013 1369 aa24.04■■□□□ 1.44
TMEFF1-201ENST00000374879 PTPRUQ92729 1446 aa24.04■■□□□ 1.44
TMEFF1-201ENST00000374879 COL9A3Q14050 684 aaPredicted RBP24.03■■□□□ 1.44
TMEFF1-201ENST00000374879 ARMCX5Q6P1M9 558 aa24.03■■□□□ 1.44
TMEFF1-201ENST00000374879 CC2D1AQ6P1N0 951 aaPredicted RBP24.03■■□□□ 1.44
TMEFF1-201ENST00000374879 AK7Q96M32 723 aa24.03■■□□□ 1.44
TMEFF1-201ENST00000374879 ADAM21Q9UKJ8 722 aa24.03■■□□□ 1.44
TMEFF1-201ENST00000374879 IFIT2P09913 472 aaKnown RBP24.03■■□□□ 1.44
TMEFF1-201ENST00000374879 CNTROBQ8N137 903 aa24.03■■□□□ 1.44
TMEFF1-201ENST00000374879 CARD6Q9BX69 1037 aa24.03■■□□□ 1.44
TMEFF1-201ENST00000374879 MMP14P50281 582 aa24.02■■□□□ 1.44
TMEFF1-201ENST00000374879 TM6SF1Q9BZW5 370 aa24.02■■□□□ 1.44
TMEFF1-201ENST00000374879 KIF13AQ9H1H9 1805 aa24.02■■□□□ 1.44
TMEFF1-201ENST00000374879 ETF1P62495 437 aaKnown RBP24.02■■□□□ 1.44
TMEFF1-201ENST00000374879 TOMM22Q9NS69 142 aa24.02■■□□□ 1.44
TMEFF1-201ENST00000374879 AOPEPQ8N6M6 819 aa24.01■■□□□ 1.43
TMEFF1-201ENST00000374879 CCDC158Q5M9N0 1113 aa24.01■■□□□ 1.43
TMEFF1-201ENST00000374879 EXOC4Q96A65 974 aa24.01■■□□□ 1.43
TMEFF1-201ENST00000374879 ADCY9O60503 1353 aa24.01■■□□□ 1.43
TMEFF1-201ENST00000374879 URI1O94763 535 aaPredicted RBP24■■□□□ 1.43
TMEFF1-201ENST00000374879 GUCY2CP25092 1073 aa24■■□□□ 1.43
TMEFF1-201ENST00000374879 FBXW7Q969H0 707 aa24■■□□□ 1.43
TMEFF1-201ENST00000374879 AMOTL2Q9Y2J4 779 aa24■■□□□ 1.43
TMEFF1-201ENST00000374879 FLT4P35916 1363 aa24■■□□□ 1.43
TMEFF1-201ENST00000374879 PLEKHG2Q9H7P9 1386 aa24■■□□□ 1.43
TMEFF1-201ENST00000374879 FANCGO15287 622 aa24■■□□□ 1.43
TMEFF1-201ENST00000374879 PACS2Q86VP3 889 aa24■■□□□ 1.43
TMEFF1-201ENST00000374879 GOLGA6L1Q8N7Z2 621 aa24■■□□□ 1.43
TMEFF1-201ENST00000374879 IMPACTQ9P2X3 320 aa24■■□□□ 1.43
TMEFF1-201ENST00000374879 JRKLQ9Y4A0 524 aa24■■□□□ 1.43
TMEFF1-201ENST00000374879 RIMS1Q86UR5 1692 aaKnown RBP24■■□□□ 1.43
TMEFF1-201ENST00000374879 EFCAB8A8MWE9 144 aa23.99■■□□□ 1.43
TMEFF1-201ENST00000374879 ACTN2P35609 894 aa23.99■■□□□ 1.43
TMEFF1-201ENST00000374879 CEBPAP49715 358 aaPredicted RBP23.99■■□□□ 1.43
TMEFF1-201ENST00000374879 EVCP57679 992 aa23.99■■□□□ 1.43
TMEFF1-201ENST00000374879 NGDNQ8NEJ9 315 aaKnown RBP23.99■■□□□ 1.43
TMEFF1-201ENST00000374879 AMPHP49418 695 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms