RNA–Protein interactions for RNA: ENST00000374864.8

ITCH-202, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITCH, Length 6,401 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-202ENST00000374864 PROSER2Q86WR7 435 aaPredicted RBP5.06□□□□□ -1.6
ITCH-202ENST00000374864 TRMT44Q8IYL2 757 aaKnown RBP5.06□□□□□ -1.6
ITCH-202ENST00000374864 FAM89AQ96GI7 184 aa5.06□□□□□ -1.6
ITCH-202ENST00000374864 CBX8Q9HC52 389 aa5.06□□□□□ -1.6
ITCH-202ENST00000374864 ZNF219Q9P2Y4 722 aaPredicted RBP5.06□□□□□ -1.6
ITCH-202ENST00000374864 DENND2AQ9ULE3 1009 aa5.06□□□□□ -1.6
ITCH-202ENST00000374864 SLC27A2O14975 620 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 AP5Z1O43299 807 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 OFD1O75665 1012 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 ADAMTS2O95450 1211 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 MBD3O95983 291 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 HSPA2P54652 639 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 ATP2B3Q16720 1220 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 CFAP100Q494V2 611 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 FAM182BQ5T319 152 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 SYT10Q6XYQ8 523 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 PUS3Q9BZE2 481 aaKnown RBP5.05□□□□□ -1.6
ITCH-202ENST00000374864 CAMSAP1Q5T5Y3 1602 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 CASP1P29466 404 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 TNNT3P45378 269 aaPredicted RBP5.05□□□□□ -1.6
ITCH-202ENST00000374864 ATP2B2Q01814 1243 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 GRAMD1CQ8IYS0 662 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 CCDC112Q8NEF3 446 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 ABCC11Q96J66 1382 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 GOLGA8BA8MQT2 603 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 CSPP1Q1MSJ5 1256 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 RALYLQ86SE5 291 aaKnown RBP5.05□□□□□ -1.6
ITCH-202ENST00000374864 DRC1Q96MC2 740 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 CLIC6Q96NY7 704 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 BCL2L12Q9HB09 334 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 PUF60Q9UHX1 559 aaKnown RBP5.05□□□□□ -1.6
ITCH-202ENST00000374864 TBC1D2BQ9UPU7 963 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 IFIT1P09914 478 aaKnown RBP5.05□□□□□ -1.6
ITCH-202ENST00000374864 ELF2Q15723 593 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 LRRC24Q50LG9 513 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 TEX35Q5T0J7 233 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 PDCL3Q9H2J4 239 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 NLRP1Q9C000 1473 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 ABCB7O75027 752 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 ATXN8OSP0DMR3 200 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 CTDSPL2Q05D32 466 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 RNF20Q5VTR2 975 aa5.05□□□□□ -1.6
ITCH-202ENST00000374864 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.05□□□□□ -1.61e-7■■■■■ 231.7
ITCH-202ENST00000374864 ZPR1O75312 459 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 NAP1L1P55209 391 aaKnown RBP5.04□□□□□ -1.6
ITCH-202ENST00000374864 PIP4K2BP78356 416 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 CEP135Q66GS9 1140 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 EAF2Q96CJ1 260 aaPredicted RBP5.04□□□□□ -1.6
ITCH-202ENST00000374864 IFNKQ9P0W0 207 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 ABCC4O15439 1325 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 SEC31AO94979 1220 aaKnown RBP5.04□□□□□ -1.6
ITCH-202ENST00000374864 PLEKHO1Q53GL0 409 aaPredicted RBP5.04□□□□□ -1.6
ITCH-202ENST00000374864 C11orf57Q6ZUT1 292 aaPredicted RBP5.04□□□□□ -1.6
ITCH-202ENST00000374864 VPS37DQ86XT2 251 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 MNS1Q8NEH6 495 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 NEK1Q96PY6 1258 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 VAT1LQ9HCJ6 419 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.04□□□□□ -1.6
ITCH-202ENST00000374864 MAP3K4Q9Y6R4 1608 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 POGZQ7Z3K3 1410 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 DDX58O95786 925 aaKnown RBP5.04□□□□□ -1.6
ITCH-202ENST00000374864 ADORA1P30542 326 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 MATR3P43243 847 aaKnown RBP eCLIP5.04□□□□□ -1.68e-7■■■□□ 18.4
ITCH-202ENST00000374864 EPHA10Q5JZY3 1008 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 MARCH10Q8NA82 808 aaPredicted RBP5.04□□□□□ -1.6
ITCH-202ENST00000374864 ECHDC1Q9NTX5 307 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 SLC52A1Q9NWF4 448 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 UBE2HP62256 183 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 DNAJC21Q5F1R6 531 aaKnown RBP5.04□□□□□ -1.6
ITCH-202ENST00000374864 TTLL7Q6ZT98 887 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 TTC6Q86TZ1 520 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 PSMB7Q99436 277 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 ATP6V1DQ9Y5K8 247 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 LRRC7Q96NW7 1537 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 RNF17Q9BXT8 1623 aaKnown RBP5.04□□□□□ -1.6
ITCH-202ENST00000374864 CHL1O00533 1208 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 DESI2Q9BSY9 194 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 SLC26A6Q9BXS9 759 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 LZTFL1Q9NQ48 299 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 WDR70Q9NW82 654 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 KCNJ14Q9UNX9 436 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 MYO5BQ9ULV0 1848 aa5.04□□□□□ -1.6
ITCH-202ENST00000374864 KLF18A0A0U1RQI7 1052 aa5.03□□□□□ -1.6
ITCH-202ENST00000374864 PRDM1O75626 825 aa5.03□□□□□ -1.6
ITCH-202ENST00000374864 METTL24Q5JXM2 366 aa5.03□□□□□ -1.6
ITCH-202ENST00000374864 WWC2Q6AWC2 1192 aa5.03□□□□□ -1.6
ITCH-202ENST00000374864 SMYD4Q8IYR2 804 aaPredicted RBP5.03□□□□□ -1.6
ITCH-202ENST00000374864 DNAI1Q9UI46 699 aa5.03□□□□□ -1.6
ITCH-202ENST00000374864 CLIC4Q9Y696 253 aa5.03□□□□□ -1.6
ITCH-202ENST00000374864 SKILP12757 684 aa5.03□□□□□ -1.6
ITCH-202ENST00000374864 RNASE9P60153 205 aaKnown RBP5.03□□□□□ -1.6
ITCH-202ENST00000374864 PTPN14Q15678 1187 aa5.03□□□□□ -1.6
ITCH-202ENST00000374864 NOL7Q9UMY1 257 aaKnown RBP5.03□□□□□ -1.6
ITCH-202ENST00000374864 GLRX3O76003 335 aaKnown RBP5.03□□□□□ -1.6
ITCH-202ENST00000374864 PSMA5P28066 241 aa5.03□□□□□ -1.6
ITCH-202ENST00000374864 PNOCQ13519 176 aa5.03□□□□□ -1.6
ITCH-202ENST00000374864 ZHX3Q9H4I2 956 aa5.03□□□□□ -1.6
ITCH-202ENST00000374864 PPRC1Q5VV67 1664 aaKnown RBP5.03□□□□□ -1.6
ITCH-202ENST00000374864 GRM8O00222 908 aa5.03□□□□□ -1.6
ITCH-202ENST00000374864 TRIM29Q14134 588 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms