RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 METTL22Q9BUU2 404 aaPredicted RBP14.66□□□□□ -0.06
HMGCL-202ENST00000374487 CCDC87Q9NVE4 849 aa14.66□□□□□ -0.06
HMGCL-202ENST00000374487 ZNF330Q9Y3S2 320 aaPredicted RBP14.66□□□□□ -0.06
HMGCL-202ENST00000374487 NEURL1BA8MQ27 555 aa14.65□□□□□ -0.06
HMGCL-202ENST00000374487 L1TD1Q5T7N2 865 aaKnown RBP14.65□□□□□ -0.06
HMGCL-202ENST00000374487 RC3H1Q5TC82 1133 aaKnown RBP14.65□□□□□ -0.06
HMGCL-202ENST00000374487 ECHDC1Q9NTX5 307 aa14.65□□□□□ -0.06
HMGCL-202ENST00000374487 USP42Q9H9J4 1324 aaKnown RBP14.64□□□□□ -0.07
HMGCL-202ENST00000374487 EPB41L2O43491 1005 aaKnown RBP14.64□□□□□ -0.07
HMGCL-202ENST00000374487 GCKRQ14397 625 aa14.64□□□□□ -0.07
HMGCL-202ENST00000374487 TRAPPC3LQ5T215 181 aa14.64□□□□□ -0.07
HMGCL-202ENST00000374487 KAZALD1Q96I82 304 aa14.64□□□□□ -0.07
HMGCL-202ENST00000374487 PALD1Q9ULE6 856 aa14.64□□□□□ -0.07
HMGCL-202ENST00000374487 SKOR2Q2VWA4 1001 aaPredicted RBP14.64□□□□□ -0.07
HMGCL-202ENST00000374487 KIAA1211Q6ZU35 1233 aa14.64□□□□□ -0.07
HMGCL-202ENST00000374487 AACSQ86V21 672 aa14.64□□□□□ -0.07
HMGCL-202ENST00000374487 VSIG10Q8N0Z9 540 aa14.64□□□□□ -0.07
HMGCL-202ENST00000374487 LRP10Q7Z4F1 713 aa14.63□□□□□ -0.07
HMGCL-202ENST00000374487 BRPF3Q9ULD4 1205 aa14.63□□□□□ -0.07
HMGCL-202ENST00000374487 ZNF831Q5JPB2 1677 aa14.63□□□□□ -0.07
HMGCL-202ENST00000374487 GOLGA6L3A6NEY3 463 aa14.63□□□□□ -0.07
HMGCL-202ENST00000374487 SGSM2O43147 1006 aa14.63□□□□□ -0.07
HMGCL-202ENST00000374487 CWC27Q6UX04 472 aaKnown RBP14.63□□□□□ -0.07
HMGCL-202ENST00000374487 SIL1Q9H173 461 aa14.63□□□□□ -0.07
HMGCL-202ENST00000374487 IL25Q9H293 177 aa14.63□□□□□ -0.07
HMGCL-202ENST00000374487 DIAPH3Q9NSV4 1193 aa14.63□□□□□ -0.07
HMGCL-202ENST00000374487 PPP1R1BQ9UD71 204 aaPredicted RBP14.63□□□□□ -0.07
HMGCL-202ENST00000374487 NBPF26B4DH59 902 aa14.62□□□□□ -0.07
HMGCL-202ENST00000374487 NBPF10Q6P3W6 841 aaKnown RBP14.62□□□□□ -0.07
HMGCL-202ENST00000374487 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
HMGCL-202ENST00000374487 ZGPATQ8N5A5 531 aaKnown RBP14.62□□□□□ -0.07
HMGCL-202ENST00000374487 NBPF15Q8N660 670 aa14.62□□□□□ -0.07
HMGCL-202ENST00000374487 TMX3Q96JJ7 454 aa14.62□□□□□ -0.07
HMGCL-202ENST00000374487 ARXQ96QS3 562 aa14.62□□□□□ -0.07
HMGCL-202ENST00000374487 GOLGB1Q14789 3259 aaKnown RBP14.62□□□□□ -0.07
HMGCL-202ENST00000374487 QSER1Q2KHR3 1735 aa14.62□□□□□ -0.07
HMGCL-202ENST00000374487 LRP5O75197 1615 aa14.62□□□□□ -0.07
HMGCL-202ENST00000374487 HSPA4P34932 840 aa14.61□□□□□ -0.07
HMGCL-202ENST00000374487 RFC4P35249 363 aa14.61□□□□□ -0.07
HMGCL-202ENST00000374487 RUFY2Q8WXA3 655 aa14.61□□□□□ -0.07
HMGCL-202ENST00000374487 SASH1O94885 1247 aa14.61□□□□□ -0.07
HMGCL-202ENST00000374487 STARD3NLO95772 234 aa14.61□□□□□ -0.07
HMGCL-202ENST00000374487 CLEC17AQ6ZS10 378 aa14.61□□□□□ -0.07
HMGCL-202ENST00000374487 TBC1D2BQ9UPU7 963 aa14.61□□□□□ -0.07
HMGCL-202ENST00000374487 BAG4O95429 457 aaKnown RBP14.6□□□□□ -0.07
HMGCL-202ENST00000374487 GYS1P13807 737 aa14.6□□□□□ -0.07
HMGCL-202ENST00000374487 USPL1Q5W0Q7 1092 aa14.6□□□□□ -0.07
HMGCL-202ENST00000374487 IL27Q8NEV9 243 aa14.6□□□□□ -0.07
HMGCL-202ENST00000374487 FLAD1Q8NFF5 587 aa14.6□□□□□ -0.07
HMGCL-202ENST00000374487 SLC16A10Q8TF71 515 aa14.6□□□□□ -0.07
HMGCL-202ENST00000374487 UPF3BQ9BZI7 483 aaKnown RBP14.6□□□□□ -0.07
HMGCL-202ENST00000374487 FHDC1Q9C0D6 1143 aaPredicted RBP14.6□□□□□ -0.07
HMGCL-202ENST00000374487 UTRNP46939 3433 aa14.6□□□□□ -0.07
HMGCL-202ENST00000374487 RAD50Q92878 1312 aa14.6□□□□□ -0.07
HMGCL-202ENST00000374487 NOL8Q76FK4 1167 aaKnown RBP14.6□□□□□ -0.07
HMGCL-202ENST00000374487 EVI5LQ96CN4 794 aa14.6□□□□□ -0.07
HMGCL-202ENST00000374487 CICQ96RK0 1608 aaPredicted RBP14.59□□□□□ -0.07
HMGCL-202ENST00000374487 ATP5J2-PTCD1G3V325 749 aa14.59□□□□□ -0.07
HMGCL-202ENST00000374487 UBE3BQ7Z3V4 1068 aa14.59□□□□□ -0.07
HMGCL-202ENST00000374487 PLBD2Q8NHP8 589 aa14.59□□□□□ -0.07
HMGCL-202ENST00000374487 KLHDC4Q8TBB5 520 aa14.59□□□□□ -0.07
HMGCL-202ENST00000374487 JARID2Q92833 1246 aaPredicted RBP14.59□□□□□ -0.07
HMGCL-202ENST00000374487 EAF2Q96CJ1 260 aaPredicted RBP14.59□□□□□ -0.07
HMGCL-202ENST00000374487 CCDC8Q9H0W5 538 aaPredicted RBP14.59□□□□□ -0.07
HMGCL-202ENST00000374487 BCL2L12Q9HB09 334 aa14.59□□□□□ -0.07
HMGCL-202ENST00000374487 A0A087WZG4 1122 aa14.58□□□□□ -0.07
HMGCL-202ENST00000374487 EIF5P55010 431 aaKnown RBP14.58□□□□□ -0.07
HMGCL-202ENST00000374487 EPHA10Q5JZY3 1008 aa14.58□□□□□ -0.07
HMGCL-202ENST00000374487 IL17RAQ96F46 866 aa14.58□□□□□ -0.07
HMGCL-202ENST00000374487 COL15A1P39059 1388 aa14.58□□□□□ -0.07
HMGCL-202ENST00000374487 C4AP0C0L4 1744 aa14.58□□□□□ -0.08
HMGCL-202ENST00000374487 MMP10P09238 476 aa14.58□□□□□ -0.08
HMGCL-202ENST00000374487 PKP1Q13835 747 aa14.58□□□□□ -0.08
HMGCL-202ENST00000374487 LSG1Q9H089 658 aaKnown RBP14.58□□□□□ -0.08
HMGCL-202ENST00000374487 CYP2E1P05181 493 aaPredicted RBP14.57□□□□□ -0.08
HMGCL-202ENST00000374487 MCTP1Q6DN14 999 aa14.57□□□□□ -0.08
HMGCL-202ENST00000374487 TEX13AQ9BXU3 409 aaPredicted RBP14.57□□□□□ -0.08
HMGCL-202ENST00000374487 WWC3Q9ULE0 1092 aa14.57□□□□□ -0.08
HMGCL-202ENST00000374487 ERBB4Q15303 1308 aa14.57□□□□□ -0.08
HMGCL-202ENST00000374487 FSD2A1L4K1 749 aa14.57□□□□□ -0.08
HMGCL-202ENST00000374487 NLGN2Q8NFZ4 835 aa14.57□□□□□ -0.08
HMGCL-202ENST00000374487 HIP1O00291 1037 aa14.56□□□□□ -0.08
HMGCL-202ENST00000374487 ADRA2BP18089 450 aa14.56□□□□□ -0.08
HMGCL-202ENST00000374487 POLD1P28340 1107 aa14.56□□□□□ -0.08
HMGCL-202ENST00000374487 CUL4AQ13619 759 aa14.56□□□□□ -0.08
HMGCL-202ENST00000374487 BICDL1Q6ZP65 573 aa14.56□□□□□ -0.08
HMGCL-202ENST00000374487 INTS4Q96HW7 963 aaKnown RBP14.56□□□□□ -0.08
HMGCL-202ENST00000374487 SYT17Q9BSW7 474 aa14.56□□□□□ -0.08
HMGCL-202ENST00000374487 SNX14Q9Y5W7 946 aa14.56□□□□□ -0.08
HMGCL-202ENST00000374487 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.56□□□□□ -0.08
HMGCL-202ENST00000374487 DDX49Q9Y6V7 483 aaKnown RBP14.56□□□□□ -0.08
HMGCL-202ENST00000374487 COPRSQ9NQ92 184 aa14.56□□□□□ -0.08
HMGCL-202ENST00000374487 ZPR1O75312 459 aa14.55□□□□□ -0.08
HMGCL-202ENST00000374487 DDR1Q08345 913 aa14.55□□□□□ -0.08
HMGCL-202ENST00000374487 BOLA2Q9H3K6 86 aa14.55□□□□□ -0.08
HMGCL-202ENST00000374487 TLR7Q9NYK1 1049 aaKnown RBP14.55□□□□□ -0.08
HMGCL-202ENST00000374487 AK9Q5TCS8 1911 aa14.54□□□□□ -0.08
HMGCL-202ENST00000374487 IL6STP40189 918 aaPredicted RBP14.54□□□□□ -0.08
HMGCL-202ENST00000374487 NARFQ9UHQ1 456 aa14.54□□□□□ -0.08
HMGCL-202ENST00000374487 XRCC6P12956 609 aaKnown RBP eCLIP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms