RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 CHPF2Q9P2E5 772 aa18.04■□□□□ 0.48
CXCL12-202ENST00000374426 TRIM35Q9UPQ4 493 aa18.04■□□□□ 0.48
CXCL12-202ENST00000374426 HSPA8P11142 646 aaKnown RBP18.03■□□□□ 0.48
CXCL12-202ENST00000374426 GRAPQ13588 217 aa18.03■□□□□ 0.48
CXCL12-202ENST00000374426 DDX46Q7L014 1031 aaKnown RBP18.03■□□□□ 0.48
CXCL12-202ENST00000374426 GRAPLQ8TC17 118 aaPredicted RBP18.03■□□□□ 0.48
CXCL12-202ENST00000374426 ZNF428Q96B54 188 aa18.03■□□□□ 0.48
CXCL12-202ENST00000374426 CAPNS2Q96L46 248 aa18.03■□□□□ 0.48
CXCL12-202ENST00000374426 MYBBP1AQ9BQG0 1328 aaKnown RBP18.02■□□□□ 0.48
CXCL12-202ENST00000374426 CIAPIN1Q6FI81 312 aa18.02■□□□□ 0.48
CXCL12-202ENST00000374426 LAS1LQ9Y4W2 734 aaKnown RBP18.02■□□□□ 0.48
CXCL12-202ENST00000374426 THSD7BQ9C0I4 1608 aa18.01■□□□□ 0.47
CXCL12-202ENST00000374426 RAD17O75943 681 aa18.01■□□□□ 0.47
CXCL12-202ENST00000374426 HDGFL1Q5TGJ6 251 aa18.01■□□□□ 0.47
CXCL12-202ENST00000374426 CYP4F22Q6NT55 531 aa18.01■□□□□ 0.47
CXCL12-202ENST00000374426 PLBD2Q8NHP8 589 aa18.01■□□□□ 0.47
CXCL12-202ENST00000374426 RUNDC1Q96C34 613 aa18.01■□□□□ 0.47
CXCL12-202ENST00000374426 TLL2Q9Y6L7 1015 aa18.01■□□□□ 0.47
CXCL12-202ENST00000374426 TAF1P21675 1872 aa18.01■□□□□ 0.47
CXCL12-202ENST00000374426 TRPM7Q96QT4 1865 aa18.01■□□□□ 0.47
CXCL12-202ENST00000374426 CDHR2Q9BYE9 1310 aa18■□□□□ 0.47
CXCL12-202ENST00000374426 DUOX1Q9NRD9 1551 aa18■□□□□ 0.47
CXCL12-202ENST00000374426 YDJCA8MPS7 323 aa18■□□□□ 0.47
CXCL12-202ENST00000374426 ECE1P42892 770 aa18■□□□□ 0.47
CXCL12-202ENST00000374426 PAXIP1Q6ZW49 1069 aaPredicted RBP18■□□□□ 0.47
CXCL12-202ENST00000374426 PGAP2Q9UHJ9 254 aa18■□□□□ 0.47
CXCL12-202ENST00000374426 HOXB7P09629 217 aa17.99■□□□□ 0.47
CXCL12-202ENST00000374426 HIRAP54198 1017 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-202ENST00000374426 DDX10Q13206 875 aaKnown RBP17.99■□□□□ 0.47
CXCL12-202ENST00000374426 GRM1Q13255 1194 aa17.99■□□□□ 0.47
CXCL12-202ENST00000374426 TNIP1Q15025 636 aa17.99■□□□□ 0.47
CXCL12-202ENST00000374426 ANKRD13DQ6ZTN6 518 aa17.99■□□□□ 0.47
CXCL12-202ENST00000374426 TMC4Q7Z404 712 aa17.99■□□□□ 0.47
CXCL12-202ENST00000374426 FAM89AQ96GI7 184 aa17.99■□□□□ 0.47
CXCL12-202ENST00000374426 GPR101Q96P66 508 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-202ENST00000374426 ISCA1Q9BUE6 129 aa17.99■□□□□ 0.47
CXCL12-202ENST00000374426 GLIS2Q9BZE0 524 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-202ENST00000374426 LRRC37AA6NMS7 1700 aa17.98■□□□□ 0.47
CXCL12-202ENST00000374426 SAPCD2Q86UD0 394 aa17.98■□□□□ 0.47
CXCL12-202ENST00000374426 TRPM4Q8TD43 1214 aa17.98■□□□□ 0.47
CXCL12-202ENST00000374426 BCL2L13Q9BXK5 485 aa17.98■□□□□ 0.47
CXCL12-202ENST00000374426 DBF4Q9UBU7 674 aaPredicted RBP17.98■□□□□ 0.47
CXCL12-202ENST00000374426 ADAMTS8Q9UP79 889 aa17.98■□□□□ 0.47
CXCL12-202ENST00000374426 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
CXCL12-202ENST00000374426 SHTN1A0MZ66 631 aa17.97■□□□□ 0.47
CXCL12-202ENST00000374426 ATP5J2-PTCD1G3V325 749 aa17.97■□□□□ 0.47
CXCL12-202ENST00000374426 CELF2O95319 508 aaKnown RBP17.97■□□□□ 0.47
CXCL12-202ENST00000374426 WDR43Q15061 677 aaKnown RBP eCLIP17.97■□□□□ 0.47
CXCL12-202ENST00000374426 SF3B3Q15393 1217 aaKnown RBP17.97■□□□□ 0.47
CXCL12-202ENST00000374426 ZC3H15Q8WU90 426 aaKnown RBP17.97■□□□□ 0.47
CXCL12-202ENST00000374426 CELF1Q92879 486 aaKnown RBP17.97■□□□□ 0.47
CXCL12-202ENST00000374426 COL4A1P02462 1669 aa17.96■□□□□ 0.47
CXCL12-202ENST00000374426 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
CXCL12-202ENST00000374426 CNOT7Q9UIV1 285 aaKnown RBP17.96■□□□□ 0.47
CXCL12-202ENST00000374426 AOC2O75106 756 aa17.95■□□□□ 0.46
CXCL12-202ENST00000374426 DUSP27Q5VZP5 1158 aa17.95■□□□□ 0.46
CXCL12-202ENST00000374426 HYPKQ9NX55 129 aa17.95■□□□□ 0.46
CXCL12-202ENST00000374426 NSFL1CQ9UNZ2 370 aaKnown RBP17.95■□□□□ 0.46
CXCL12-202ENST00000374426 ZBTB12Q9Y330 459 aaPredicted RBP17.95■□□□□ 0.46
CXCL12-202ENST00000374426 MAP2K2P36507 400 aa17.94■□□□□ 0.46
CXCL12-202ENST00000374426 TRIM28Q13263 835 aaKnown RBP17.94■□□□□ 0.46
CXCL12-202ENST00000374426 WASHC4Q2M389 1173 aa17.94■□□□□ 0.46
CXCL12-202ENST00000374426 RTL5Q5HYW3 569 aaPredicted RBP17.94■□□□□ 0.46
CXCL12-202ENST00000374426 MICALL2Q8IY33 904 aa17.94■□□□□ 0.46
CXCL12-202ENST00000374426 ABHD8Q96I13 439 aa17.94■□□□□ 0.46
CXCL12-202ENST00000374426 HHIPL1Q96JK4 782 aa17.94■□□□□ 0.46
CXCL12-202ENST00000374426 BEGAINQ9BUH8 593 aa17.94■□□□□ 0.46
CXCL12-202ENST00000374426 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
CXCL12-202ENST00000374426 POLLQ9UGP5 575 aa17.94■□□□□ 0.46
CXCL12-202ENST00000374426 H7C1D1 291 aa17.93■□□□□ 0.46
CXCL12-202ENST00000374426 PSMD14O00487 310 aa17.93■□□□□ 0.46
CXCL12-202ENST00000374426 GPSM2P81274 684 aa17.93■□□□□ 0.46
CXCL12-202ENST00000374426 CDC37L1Q7L3B6 337 aa17.93■□□□□ 0.46
CXCL12-202ENST00000374426 DPF2Q92785 391 aa17.93■□□□□ 0.46
CXCL12-202ENST00000374426 ZNF408Q9H9D4 720 aa17.93■□□□□ 0.46
CXCL12-202ENST00000374426 DBNDD1Q9H9R9 158 aa17.93■□□□□ 0.46
CXCL12-202ENST00000374426 IRS4O14654 1257 aaPredicted RBP17.92■□□□□ 0.46
CXCL12-202ENST00000374426 RIMBP2O15034 1052 aa17.92■□□□□ 0.46
CXCL12-202ENST00000374426 ZNF853P0CG23 659 aa17.92■□□□□ 0.46
CXCL12-202ENST00000374426 TSKSQ9UJT2 592 aa17.92■□□□□ 0.46
CXCL12-202ENST00000374426 C6orf229H3BNL8 230 aa17.91■□□□□ 0.46
CXCL12-202ENST00000374426 DLK2Q6UY11 383 aa17.91■□□□□ 0.46
CXCL12-202ENST00000374426 SAMD7Q7Z3H4 446 aa17.91■□□□□ 0.46
CXCL12-202ENST00000374426 KCNQ5Q9NR82 932 aa17.91■□□□□ 0.46
CXCL12-202ENST00000374426 RTL9Q8NET4 1388 aa17.91■□□□□ 0.46
CXCL12-202ENST00000374426 EGFRP00533 1210 aa17.9■□□□□ 0.46
CXCL12-202ENST00000374426 RPS8P62241 208 aaKnown RBP17.9■□□□□ 0.46
CXCL12-202ENST00000374426 USP48Q86UV5 1035 aa17.9■□□□□ 0.46
CXCL12-202ENST00000374426 PHAXQ9H814 394 aaKnown RBP17.9■□□□□ 0.46
CXCL12-202ENST00000374426 ECE2O60344 883 aa17.89■□□□□ 0.45
CXCL12-202ENST00000374426 DOK7Q18PE1 504 aa17.89■□□□□ 0.45
CXCL12-202ENST00000374426 TBC1D10BQ4KMP7 808 aaPredicted RBP17.89■□□□□ 0.45
CXCL12-202ENST00000374426 RIC3Q7Z5B4 369 aa17.89■□□□□ 0.45
CXCL12-202ENST00000374426 ZBTB38Q8NAP3 1195 aaPredicted RBP17.89■□□□□ 0.45
CXCL12-202ENST00000374426 TBC1D16Q8TBP0 767 aa17.89■□□□□ 0.45
CXCL12-202ENST00000374426 EYA3Q99504 573 aa17.89■□□□□ 0.45
CXCL12-202ENST00000374426 SEC31BQ9NQW1 1179 aa17.89■□□□□ 0.45
CXCL12-202ENST00000374426 RPS12P25398 132 aaKnown RBP17.88■□□□□ 0.45
CXCL12-202ENST00000374426 BRPF1P55201 1214 aaPredicted RBP17.88■□□□□ 0.45
CXCL12-202ENST00000374426 GOLGA2Q08379 1002 aa17.88■□□□□ 0.45
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