RNA–Protein interactions for RNA: ENST00000373991.3

SCAND1-202, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-202ENST00000373991 GREM2Q9H772 168 aa27.63■■■□□ 2.01
SCAND1-202ENST00000373991 PNMA6EA0A0J9YXQ4 647 aa27.62■■■□□ 2.01
SCAND1-202ENST00000373991 FAM161AQ3B820 660 aa27.62■■■□□ 2.01
SCAND1-202ENST00000373991 ERICH6BQ5W0A0 696 aa27.62■■■□□ 2.01
SCAND1-202ENST00000373991 SIRT2Q8IXJ6 389 aa27.62■■■□□ 2.01
SCAND1-202ENST00000373991 KLRG2A4D1S0 409 aaPredicted RBP27.61■■■□□ 2.01
SCAND1-202ENST00000373991 PPP1R1BQ9UD71 204 aaPredicted RBP27.61■■■□□ 2.01
SCAND1-202ENST00000373991 TNRC6CQ9HCJ0 1690 aaKnown RBP27.61■■■□□ 2.01
SCAND1-202ENST00000373991 CRY2Q49AN0 593 aa27.61■■■□□ 2.01
SCAND1-202ENST00000373991 C10orf71Q711Q0 1435 aa27.6■■■□□ 2.01
SCAND1-202ENST00000373991 LAMB2P55268 1798 aa27.6■■■□□ 2.01
SCAND1-202ENST00000373991 RPGRQ92834 1020 aaKnown RBP27.6■■■□□ 2.01
SCAND1-202ENST00000373991 ITGA6P23229 1130 aa27.59■■■□□ 2.01
SCAND1-202ENST00000373991 IFIT5Q13325 482 aaKnown RBP27.59■■■□□ 2.01
SCAND1-202ENST00000373991 CCDC57Q2TAC2 916 aa27.59■■■□□ 2.01
SCAND1-202ENST00000373991 KLHL34Q8N239 644 aa27.59■■■□□ 2.01
SCAND1-202ENST00000373991 C2CD5Q86YS7 1000 aa27.58■■■□□ 2.01
SCAND1-202ENST00000373991 SEC31BQ9NQW1 1179 aa27.58■■■□□ 2.01
SCAND1-202ENST00000373991 H0YIN7 160 aa27.58■■■□□ 2.01
SCAND1-202ENST00000373991 SRGNP10124 158 aa27.58■■■□□ 2.01
SCAND1-202ENST00000373991 ANKRD31Q8N7Z5 1873 aa27.57■■■□□ 2
SCAND1-202ENST00000373991 ANKRD18BA2A2Z9 1011 aa27.57■■■□□ 2
SCAND1-202ENST00000373991 HMMRO75330 724 aa27.57■■■□□ 2
SCAND1-202ENST00000373991 DDX46Q7L014 1031 aaKnown RBP27.57■■■□□ 2
SCAND1-202ENST00000373991 SSH3Q8TE77 659 aa27.57■■■□□ 2
SCAND1-202ENST00000373991 CHRNA5P30532 468 aa27.56■■■□□ 2
SCAND1-202ENST00000373991 POLA2Q14181 598 aa27.56■■■□□ 2
SCAND1-202ENST00000373991 MYH3P11055 1940 aa27.56■■■□□ 2
SCAND1-202ENST00000373991 RTL9Q8NET4 1388 aa27.56■■■□□ 2
SCAND1-202ENST00000373991 RFX5P48382 616 aaPredicted RBP27.55■■■□□ 2
SCAND1-202ENST00000373991 KLHDC4Q8TBB5 520 aa27.55■■■□□ 2
SCAND1-202ENST00000373991 CD2APQ9Y5K6 639 aa27.55■■■□□ 2
SCAND1-202ENST00000373991 RBM17Q96I25 401 aaKnown RBP27.55■■■□□ 2
SCAND1-202ENST00000373991 ZNF594Q96JF6 807 aaPredicted RBP27.55■■■□□ 2
SCAND1-202ENST00000373991 PDZRN3Q9UPQ7 1066 aa27.55■■■□□ 2
SCAND1-202ENST00000373991 NPR1P16066 1061 aa27.54■■■□□ 2
SCAND1-202ENST00000373991 HOXA10P31260 410 aaPredicted RBP27.54■■■□□ 2
SCAND1-202ENST00000373991 TAF7LQ5H9L4 462 aa27.54■■■□□ 2
SCAND1-202ENST00000373991 A0A0G2JLW4 131 aa27.53■■■□□ 2
SCAND1-202ENST00000373991 ZNF622Q969S3 477 aaKnown RBP eCLIP27.53■■■□□ 2
SCAND1-202ENST00000373991 MASTLQ96GX5 879 aa27.53■■■□□ 2
SCAND1-202ENST00000373991 RWDD1Q9H446 243 aaPredicted RBP27.53■■■□□ 2
SCAND1-202ENST00000373991 PA2G4Q9UQ80 394 aaKnown RBP27.53■■■□□ 2
SCAND1-202ENST00000373991 SRCAPQ6ZRS2 3230 aa27.53■■■□□ 2
SCAND1-202ENST00000373991 TGFB2P61812 414 aa27.53■■■□□ 2
SCAND1-202ENST00000373991 PTPN12Q05209 780 aaKnown RBP27.53■■■□□ 2
SCAND1-202ENST00000373991 CDC5LQ99459 802 aaKnown RBP27.53■■■□□ 2
SCAND1-202ENST00000373991 GTF3C3Q9Y5Q9 886 aa27.53■■■□□ 2
SCAND1-202ENST00000373991 DPEP1P16444 411 aa27.52■■■□□ 2
SCAND1-202ENST00000373991 HDAC1Q13547 482 aaPredicted RBP27.52■■■□□ 2
SCAND1-202ENST00000373991 CELF1Q92879 486 aaKnown RBP27.52■■■□□ 2
SCAND1-202ENST00000373991 PPP4R2Q9NY27 417 aa27.52■■■□□ 2
SCAND1-202ENST00000373991 IGHDP01880 384 aa27.51■■□□□ 1.99
SCAND1-202ENST00000373991 CRAMP1Q96RY5 1269 aa27.51■■□□□ 1.99
SCAND1-202ENST00000373991 RPS8P62241 208 aaKnown RBP27.5■■□□□ 1.99
SCAND1-202ENST00000373991 ANKRD18AQ8IVF6 992 aa27.5■■□□□ 1.99
SCAND1-202ENST00000373991 CCDC136Q96JN2 1154 aa27.5■■□□□ 1.99
SCAND1-202ENST00000373991 SIL1Q9H173 461 aa27.5■■□□□ 1.99
SCAND1-202ENST00000373991 COPRSQ9NQ92 184 aa27.5■■□□□ 1.99
SCAND1-202ENST00000373991 SURF6O75683 361 aaKnown RBP27.5■■□□□ 1.99
SCAND1-202ENST00000373991 GRAPQ13588 217 aa27.5■■□□□ 1.99
SCAND1-202ENST00000373991 STYK1Q6J9G0 422 aa27.5■■□□□ 1.99
SCAND1-202ENST00000373991 GRAPLQ8TC17 118 aaPredicted RBP27.5■■□□□ 1.99
SCAND1-202ENST00000373991 ALDH1B1P30837 517 aa27.49■■□□□ 1.99
SCAND1-202ENST00000373991 IGHMBP2P38935 993 aaKnown RBP27.49■■□□□ 1.99
SCAND1-202ENST00000373991 LDHAL6AQ6ZMR3 332 aa27.49■■□□□ 1.99
SCAND1-202ENST00000373991 FHDC1Q9C0D6 1143 aaPredicted RBP27.49■■□□□ 1.99
SCAND1-202ENST00000373991 KIF13BQ9NQT8 1826 aa27.48■■□□□ 1.99
SCAND1-202ENST00000373991 KCNA3P22001 575 aa27.48■■□□□ 1.99
SCAND1-202ENST00000373991 MPHOSPH8Q99549 860 aa27.48■■□□□ 1.99
SCAND1-202ENST00000373991 EXOC6BQ9Y2D4 811 aa27.47■■□□□ 1.99
SCAND1-202ENST00000373991 COL11A2P13942 1736 aaPredicted RBP27.47■■□□□ 1.99
SCAND1-202ENST00000373991 B4GALNT3Q6L9W6 998 aa27.47■■□□□ 1.99
SCAND1-202ENST00000373991 PUS3Q9BZE2 481 aaKnown RBP27.47■■□□□ 1.99
SCAND1-202ENST00000373991 BBOX1O75936 387 aa27.46■■□□□ 1.99
SCAND1-202ENST00000373991 CNKSR1Q969H4 720 aa27.46■■□□□ 1.99
SCAND1-202ENST00000373991 DCTPP1Q9H773 170 aa27.46■■□□□ 1.99
SCAND1-202ENST00000373991 CNNM1Q9NRU3 951 aa27.46■■□□□ 1.99
SCAND1-202ENST00000373991 NOP58Q9Y2X3 529 aaKnown RBP27.46■■□□□ 1.99
SCAND1-202ENST00000373991 COL4A1P02462 1669 aa27.46■■□□□ 1.99
SCAND1-202ENST00000373991 G3BP1Q13283 466 aaKnown RBP eCLIP27.45■■□□□ 1.992e-7■■■■■ 35.7
SCAND1-202ENST00000373991 LRRC24Q50LG9 513 aa27.45■■□□□ 1.99
SCAND1-202ENST00000373991 NLGN2Q8NFZ4 835 aa27.45■■□□□ 1.99
SCAND1-202ENST00000373991 TAF1P21675 1872 aa27.45■■□□□ 1.98
SCAND1-202ENST00000373991 EYA2O00167 538 aa27.44■■□□□ 1.98
SCAND1-202ENST00000373991 OS9Q13438 667 aaPredicted RBP27.44■■□□□ 1.98
SCAND1-202ENST00000373991 BSDC1Q9NW68 430 aaPredicted RBP27.44■■□□□ 1.98
SCAND1-202ENST00000373991 PIM2Q9P1W9 311 aa27.43■■□□□ 1.98
SCAND1-202ENST00000373991 APBB1O00213 710 aa27.42■■□□□ 1.98
SCAND1-202ENST00000373991 PRPF40BQ6NWY9 871 aaKnown RBP27.42■■□□□ 1.98
SCAND1-202ENST00000373991 ATG9AQ7Z3C6 839 aa27.42■■□□□ 1.98
SCAND1-202ENST00000373991 TTLL6Q8N841 843 aa27.42■■□□□ 1.98
SCAND1-202ENST00000373991 FBXO3Q9UK99 471 aa27.42■■□□□ 1.98
SCAND1-202ENST00000373991 RIPOR2Q9Y4F9 1068 aa27.42■■□□□ 1.98
SCAND1-202ENST00000373991 PPEF1O14829 653 aaPredicted RBP27.41■■□□□ 1.98
SCAND1-202ENST00000373991 CIAO1O76071 339 aa27.41■■□□□ 1.98
SCAND1-202ENST00000373991 HSP90AB4PQ58FF6 505 aa27.41■■□□□ 1.98
SCAND1-202ENST00000373991 SYT17Q9BSW7 474 aa27.41■■□□□ 1.98
SCAND1-202ENST00000373991 WWC3Q9ULE0 1092 aa27.41■■□□□ 1.98
SCAND1-202ENST00000373991 GCC1Q96CN9 775 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms